Miyakogusa Predicted Gene
- chr3.LjT15F18.40.nd
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr3.LjT15F18.40.nd - phase: 0
(155 letters)
Database: TAIR8_pep
32,825 sequences; 13,166,001 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G54050.1 | Symbols: | 17.4 kDa class III heat shock protein ... 156 6e-39
AT5G12030.1 | Symbols: HSP17.6, AT-HSP17.6A | AT-HSP17.6A (Arabi... 97 5e-21
AT5G12020.1 | Symbols: HSP17.6II | HSP17.6II (17.6 KDA CLASS II ... 93 6e-20
AT1G53540.1 | Symbols: | 17.6 kDa class I small heat shock prot... 76 6e-15
AT5G59720.1 | Symbols: | HSP18.2 (HEAT SHOCK PROTEIN 18.2) | ch... 71 3e-13
AT4G10250.1 | Symbols: ATHSP22.0 | ATHSP22.0 (Arabidopsis thalia... 70 4e-13
AT1G07400.1 | Symbols: | 17.8 kDa class I heat shock protein (H... 70 5e-13
AT1G59860.1 | Symbols: | 17.6 kDa class I heat shock protein (H... 68 2e-12
AT5G37670.1 | Symbols: | 15.7 kDa class I-related small heat sh... 65 1e-11
AT3G46230.1 | Symbols: | ATHSP17.4 (Arabidopsis thaliana heat s... 65 2e-11
AT4G21870.1 | Symbols: | 26.5 kDa class P-related heat shock pr... 59 1e-09
AT2G29500.1 | Symbols: | 17.6 kDa class I small heat shock prot... 59 2e-09
AT4G27670.1 | Symbols: HSP21 | HSP21 (HEAT SHOCK PROTEIN 21) | c... 55 2e-08
AT1G52560.2 | Symbols: | 26.5 kDa class I small heat shock prot... 45 2e-05
AT1G52560.1 | Symbols: | 26.5 kDa class I small heat shock prot... 45 2e-05
>AT1G54050.1 | Symbols: | 17.4 kDa class III heat shock protein
(HSP17.4-CIII) | chr1:20183226-20183790 REVERSE
Length = 155
Score = 156 bits (394), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 78/125 (62%), Positives = 105/125 (84%), Gaps = 5/125 (4%)
Query: 19 PETMEKLMFP-SR-GHDNQENRGGVSS--IPVDILDTPKEYVFFMDVPGLSKSEIQVTIE 74
PE +EKL+ P SR G N E+RG SS IP+DIL++PKEY+F++D+PG+SKS+IQVT+E
Sbjct: 13 PEAIEKLILPISRSGESNNESRGRGSSNNIPIDILESPKEYIFYLDIPGISKSDIQVTVE 72
Query: 75 DENTLVIRSNGKRKRQDSE-DEGCKYLRLERRGPQNLLRKFRLPENANVSAITAKSENGV 133
+E TLVI+SNGKRKR D E +EG KY+RLERR QNL++KFRLPE+A+++++TAK + GV
Sbjct: 73 EERTLVIKSNGKRKRDDDESEEGSKYIRLERRLAQNLVKKFRLPEDADMASVTAKYQEGV 132
Query: 134 LTVVV 138
LTVV+
Sbjct: 133 LTVVI 137
>AT5G12030.1 | Symbols: HSP17.6, AT-HSP17.6A | AT-HSP17.6A
(Arabidopsis thaliana heat shock protein 17.6A) |
chr5:3884215-3884685 REVERSE
Length = 156
Score = 96.7 bits (239), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 76/111 (68%), Gaps = 5/111 (4%)
Query: 28 PSRGHDNQENRGGVSSIPVDILDTPKEYVFFMDVPGLSKSEIQVTIEDENTLVIRSNGKR 87
PSR + + +++ P D+++ P YVF +D+PG+ EIQV IE+EN LV+ +GKR
Sbjct: 32 PSRAY--MRDAKAMAATPADVIEHPDAYVFAVDMPGIKGDEIQVQIENENVLVV--SGKR 87
Query: 88 KRQDSEDEGCKYLRLERRGPQNLLRKFRLPENANVSAITAKSENGVLTVVV 138
+R + E+EG K++R+ERR + +RKF+LP+NA++ I+A +GVL V +
Sbjct: 88 QRDNKENEGVKFVRMERRMGK-FMRKFQLPDNADLEKISAACNDGVLKVTI 137
>AT5G12020.1 | Symbols: HSP17.6II | HSP17.6II (17.6 KDA CLASS II
HEAT SHOCK PROTEIN) | chr5:3882410-3882877 REVERSE
Length = 155
Score = 93.2 bits (230), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 45/112 (40%), Positives = 77/112 (68%), Gaps = 5/112 (4%)
Query: 28 PSRGHDNQENRGGVSSIPVDILDTPKEYVFFMDVPGLSKSEIQVTIEDENTLVIRSNGKR 87
PSR + + +++ P D+++ P Y F +D+PG+ EI+V +E++N LV+ +G+R
Sbjct: 31 PSRVY--MRDAKAMAATPADVIEHPNAYAFVVDMPGIKGDEIKVQVENDNVLVV--SGER 86
Query: 88 KRQDSEDEGCKYLRLERRGPQNLLRKFRLPENANVSAITAKSENGVLTVVVE 139
+R++ E+EG KY+R+ERR + +RKF+LPENA++ I+A +GVL V V+
Sbjct: 87 QRENKENEGVKYVRMERRMGK-FMRKFQLPENADLDKISAVCHDGVLKVTVQ 137
>AT1G53540.1 | Symbols: | 17.6 kDa class I small heat shock protein
(HSP17.6C-CI) (AA 1-156) | chr1:19984178-19984651
FORWARD
Length = 157
Score = 76.3 bits (186), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 64/97 (65%), Gaps = 4/97 (4%)
Query: 46 VDILDTPKEYVFFMDVPGLSKSEIQVTIEDENTLVIRSNGKRKRQDSEDEGCKYLRLERR 105
VD +TP+ +VF D+PGL K E++V +ED N L I +G+R ++ E++ K+ R+ER
Sbjct: 52 VDWRETPEAHVFKADLPGLRKEEVKVEVEDGNILQI--SGERSNEN-EEKNDKWHRVERS 108
Query: 106 GPQNLLRKFRLPENANVSAITAKSENGVLTVVVEKLP 142
+ R+FRLPENA + I A ENGVL+V V K+P
Sbjct: 109 SGK-FTRRFRLPENAKMEEIKASMENGVLSVTVPKVP 144
>AT5G59720.1 | Symbols: | HSP18.2 (HEAT SHOCK PROTEIN 18.2) |
chr5:24079858-24080343 FORWARD
Length = 161
Score = 70.9 bits (172), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 74/124 (59%), Gaps = 7/124 (5%)
Query: 22 MEKLMFPSRGHDNQENRGGVSSIP---VDILDTPKEYVFFMDVPGLSKSEIQVTIEDENT 78
E PS N V++ VD +TP+ +VF D+PGL K E++V +ED+N
Sbjct: 27 FEGFFTPSSALANASTARDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKNV 86
Query: 79 LVIRSNGKRKRQDSEDEGCKYLRLERRGPQNLLRKFRLPENANVSAITAKSENGVLTVVV 138
L I +G+R +++ E++ K+ R+ER + +R+FRLPENA + + A ENGVLTVVV
Sbjct: 87 LQI--SGERSKEN-EEKNDKWHRVERASGK-FMRRFRLPENAKMEEVKATMENGVLTVVV 142
Query: 139 EKLP 142
K P
Sbjct: 143 PKAP 146
>AT4G10250.1 | Symbols: ATHSP22.0 | ATHSP22.0 (Arabidopsis thaliana
heat shock protein 22.0) | chr4:6370533-6371120 FORWARD
Length = 195
Score = 70.5 bits (171), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 68/104 (65%), Gaps = 4/104 (3%)
Query: 40 GVSSIPVDILDTPKEYVFFMDVPGLSKSEIQVTIEDENTLVIRSNGKRKRQDSEDEGCKY 99
+S VD +T + + +D+PGL K E+++ +E+ V+R +G+RKR++ E +G ++
Sbjct: 67 ALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEVEENG--VLRVSGERKREE-EKKGDQW 123
Query: 100 LRLERRGPQNLLRKFRLPENANVSAITAKSENGVLTVVVEKLPP 143
R+ER + R+F+LP+N ++ ++ AK ENGVLT+ + KL P
Sbjct: 124 HRVERSYGK-FWRQFKLPDNVDMESVKAKLENGVLTINLTKLSP 166
>AT1G07400.1 | Symbols: | 17.8 kDa class I heat shock protein
(HSP17.8-CI) | chr1:2275145-2275618 FORWARD
Length = 157
Score = 70.1 bits (170), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 71/129 (55%), Gaps = 7/129 (5%)
Query: 22 MEKLMFPSRGHDNQENRGGVSSIPVDILDTPKEYVFFMDVPGLSKSEIQVTIEDENTLVI 81
++L FPS +++ VD +T + +VF D+PG+ K E++V IED++ L I
Sbjct: 29 FKELQFPSSLSGET---SAITNARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKI 85
Query: 82 RSNGKRKRQDSEDEGCKYLRLERRGPQNLLRKFRLPENANVSAITAKSENGVLTVVVEKL 141
+G+R + E + + R+ER Q RKF+LPEN + + A ENGVLTV V K+
Sbjct: 86 --SGERHVEKEEKQDT-WHRVERSSGQ-FSRKFKLPENVKMDQVKASMENGVLTVTVPKV 141
Query: 142 PPPQKSKTV 150
+K V
Sbjct: 142 EEAKKKAQV 150
>AT1G59860.1 | Symbols: | 17.6 kDa class I heat shock protein
(HSP17.6A-CI) | chr1:22035139-22035606 FORWARD
Length = 155
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 64/111 (57%), Gaps = 4/111 (3%)
Query: 40 GVSSIPVDILDTPKEYVFFMDVPGLSKSEIQVTIEDENTLVIRSNGKRKRQDSEDEGCKY 99
+++ VD +T + +VF D+PG+ K E++V IED++ L I +G+R + E + +
Sbjct: 42 AIANARVDWKETAEAHVFKADLPGMKKEEVKVEIEDDSVLKI--SGERHVEKEEKQDT-W 98
Query: 100 LRLERRGPQNLLRKFRLPENANVSAITAKSENGVLTVVVEKLPPPQKSKTV 150
R+ER RKFRLPEN + + A ENGVLTV V K+ +K V
Sbjct: 99 HRVER-SSGGFSRKFRLPENVKMDQVKASMENGVLTVTVPKVETNKKKAQV 148
>AT5G37670.1 | Symbols: | 15.7 kDa class I-related small heat shock
protein-like (HSP15.7-CI) | chr5:14986265-14986678
FORWARD
Length = 137
Score = 65.1 bits (157), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 62/118 (52%), Gaps = 7/118 (5%)
Query: 42 SSIPVDILDTPKEYVFFMDVPGLSKSEIQVTIEDENTLVIRSNGKRKRQDSEDEGCKYLR 101
S+ +D +++ ++F ++VPG +K +I+V IE+ N L IR G + + + E +
Sbjct: 20 STALIDWMESNNSHIFKINVPGYNKEDIKVQIEEGNVLSIRGEGIK---EEKKENLVWHV 76
Query: 102 LERR----GPQNLLRKFRLPENANVSAITAKSENGVLTVVVEKLPPPQKSKTVEVAIA 155
ER G LR+ LPEN V + A ENGVLTVVV K + SK V I
Sbjct: 77 AEREAFSGGGSEFLRRIELPENVKVDQVKAYVENGVLTVVVPKDTSSKSSKVRNVNIT 134
>AT3G46230.1 | Symbols: | ATHSP17.4 (Arabidopsis thaliana heat
shock protein 17.4) | chr3:16995248-16995718 REVERSE
Length = 156
Score = 64.7 bits (156), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 75/127 (59%), Gaps = 7/127 (5%)
Query: 22 MEKLMFPSRGHDNQENRGGVSSIPVDILDTPKEYVFFMDVPGLSKSEIQVTIEDENTLVI 81
E + P + ++ ++ VD +TP+ +VF DVPGL K E++V +ED N L I
Sbjct: 27 FEGFLTPGLTNAPAKDVAAFTNAKVDWRETPEAHVFKADVPGLKKEEVKVEVEDGNILQI 86
Query: 82 RSNGKRKRQDSEDEGCKYLRLERRGPQNLLRKFRLPENANVSAITAKSENGVLTVVVEKL 141
+G+R ++ E++ + R+ER + +R+FRLPENA V + A ENGVL+V V K+
Sbjct: 87 --SGERSSEN-EEKSDTWHRVERSSGK-FMRRFRLPENAKVEEVKASMENGVLSVTVPKV 142
Query: 142 PPPQKSK 148
Q+SK
Sbjct: 143 ---QESK 146
>AT4G21870.1 | Symbols: | 26.5 kDa class P-related heat shock
protein (HSP26.5-P) | chr4:11603768-11604297 REVERSE
Length = 134
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 12/90 (13%)
Query: 51 TPKEYVFFMDVPGLSKSEIQVTIEDENTLVIRSNGKRKRQDSEDEGCKYLRLERRGPQNL 110
+P + F +D+PGL K EI+V IED L+IR+ D+ K +
Sbjct: 33 SPDSHTFSVDLPGLRKEEIKVEIEDSIYLIIRTEA--TPMSPPDQPLKTFK--------- 81
Query: 111 LRKFRLPENANVSAITAKSENGVLTVVVEK 140
RKFRLPE+ ++ I+A E+GVLTV+V K
Sbjct: 82 -RKFRLPESIDMIGISAGYEDGVLTVIVPK 110
>AT2G29500.1 | Symbols: | 17.6 kDa class I small heat shock protein
(HSP17.6B-CI) | chr2:12640356-12640817 REVERSE
Length = 153
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 60/95 (63%), Gaps = 4/95 (4%)
Query: 46 VDILDTPKEYVFFMDVPGLSKSEIQVTIEDENTLVIRSNGKRKRQDSEDEGCKYLRLERR 105
VD +TP+ +VF D+PGL K E++V IE+++ L I +G+R + ED+ + R+ER
Sbjct: 48 VDWRETPEAHVFKADLPGLKKEEVKVEIEEDSVLKI--SGER-HVEKEDKNDTWHRVERS 104
Query: 106 GPQNLLRKFRLPENANVSAITAKSENGVLTVVVEK 140
Q R+FRLPEN + + A ENGVLTV V K
Sbjct: 105 SGQ-FTRRFRLPENVKMDQVKAAMENGVLTVTVPK 138
>AT4G27670.1 | Symbols: HSP21 | HSP21 (HEAT SHOCK PROTEIN 21) |
chr4:13819054-13819901 REVERSE
Length = 227
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 69/125 (55%), Gaps = 14/125 (11%)
Query: 20 ETMEKLMFPSRGHDNQENRGG--VSSI--PVDILDTPKEYVFFMDVPGLSKSEIQVTIED 75
+TM++ MF + NRGG VS I P DI + E D+PGLSK ++++++ED
Sbjct: 100 DTMDR-MFEDTMPVSGRNRGGSGVSEIRAPWDIKEEEHEIKMRFDMPGLSKEDVKISVED 158
Query: 76 ENTLVIRSNGKRKRQDSEDEGCKYLRLERRGPQNLLRKFRLPENANVSAITAKSENGVLT 135
N LVI+ G++K++DS+D R + + +LP+N I A+ +NGVL
Sbjct: 159 -NVLVIK--GEQKKEDSDDSWSG------RSVSSYGTRLQLPDNCEKDKIKAELKNGVLF 209
Query: 136 VVVEK 140
+ + K
Sbjct: 210 ITIPK 214
>AT1G52560.2 | Symbols: | 26.5 kDa class I small heat shock
protein-like (HSP26.5-P) | chr1:19578452-19579435
REVERSE
Length = 225
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 55 YVFFMDVPGLSKSEIQVTIEDENTLVIRSNGKRKRQDSEDEGCKYLRLERRGPQNLLRKF 114
Y +VPGL+K ++++T+ D L I+ + K + + E +Y + G N
Sbjct: 129 YKLRYEVPGLTKEDVKITVND-GILTIKGDHKAEEEKGSPEEDEYWSSKSYGYYNT--SL 185
Query: 115 RLPENANVSAITAKSENGVLTVVVEKLPPPQKS 147
LP++A V I A+ +NGVL +V+ + P+K+
Sbjct: 186 SLPDDAKVEDIKAELKNGVLNLVIPRTEKPKKN 218
>AT1G52560.1 | Symbols: | 26.5 kDa class I small heat shock
protein-like (HSP26.5-P) | chr1:19578452-19579435
REVERSE
Length = 232
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 55 YVFFMDVPGLSKSEIQVTIEDENTLVIRSNGKRKRQDSEDEGCKYLRLERRGPQNLLRKF 114
Y +VPGL+K ++++T+ D L I+ + K + + E +Y + G N
Sbjct: 136 YKLRYEVPGLTKEDVKITVND-GILTIKGDHKAEEEKGSPEEDEYWSSKSYGYYNT--SL 192
Query: 115 RLPENANVSAITAKSENGVLTVVVEKLPPPQKS 147
LP++A V I A+ +NGVL +V+ + P+K+
Sbjct: 193 SLPDDAKVEDIKAELKNGVLNLVIPRTEKPKKN 225