Miyakogusa Predicted Gene

chr3.CM0282.590.nc

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr3.CM0282.590.nc - phase: 0 
         (463 letters)

Database: TAIR8_pep 
           32,825 sequences; 13,166,001 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G54080.2 | Symbols: HGO | HGO (HOMOGENTISATE 1,2-DIOXYGENASE)...   752   0.0  
AT5G54080.1 | Symbols: HGO | HGO (HOMOGENTISATE 1,2-DIOXYGENASE)...   752   0.0  

>AT5G54080.2 | Symbols: HGO | HGO (HOMOGENTISATE 1,2-DIOXYGENASE);
           homogentisate 1,2-dioxygenase | chr5:21963146-21965296
           FORWARD
          Length = 461

 Score =  752 bits (1941), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/429 (81%), Positives = 382/429 (89%)

Query: 12  YLSGFGNHFSSEALAGALPEAQNSPLICPYGLYAEQISGTSFTSPRNLNLFSWFYRVKPS 71
           Y SGFGNHFSSEA+AGALP  QNSPL+CPYGLYAEQISGTSFTSPR LN  SW YRVKPS
Sbjct: 13  YQSGFGNHFSSEAIAGALPLDQNSPLLCPYGLYAEQISGTSFTSPRKLNQRSWLYRVKPS 72

Query: 72  VTHEPFKPRVPCNGRILSEFNHSNSSTNPTQLRWKPMDSPDSPTDFIDGLSTVCGSGSSF 131
           VTHEPFKPRVP + +++SEF+ SNS TNPTQLRW+P D PDS  DF+DGL T+CG+GSSF
Sbjct: 73  VTHEPFKPRVPAHKKLVSEFDASNSRTNPTQLRWRPEDIPDSEIDFVDGLFTICGAGSSF 132

Query: 132 MRHGYAIHMYTANKSMNNCAFCNADGDFLIVPQQGRLFITTECGRLKVSPGEIAMLPQGF 191
           +RHG+AIHMY AN  M + AFCNADGDFL+VPQ GRL+I TECGRL V+PGEIA++PQGF
Sbjct: 133 LRHGFAIHMYVANTGMKDSAFCNADGDFLLVPQTGRLWIETECGRLLVTPGEIAVIPQGF 192

Query: 192 RFTVDLPDGPSRGYVAEIFGTHFQLPDLGPIGANGLAAPRDFLVPTAWFEDKSYPGYTIV 251
           RF++DLPDG SRGYVAEI+G HFQLPDLGPIGANGLAA RDFL PTAWFED   P YTIV
Sbjct: 193 RFSIDLPDGKSRGYVAEIYGAHFQLPDLGPIGANGLAASRDFLAPTAWFEDGLRPEYTIV 252

Query: 252 QKFGGELFSAVQDFSPFNVVAWRGNYVPYKYDLSKFCPYNTVLFDHSDPSINTVLTAPTD 311
           QKFGGELF+A QDFSPFNVVAW GNYVPYKYDL KFCPYNTVL DH DPSINTVLTAPTD
Sbjct: 253 QKFGGELFTAKQDFSPFNVVAWHGNYVPYKYDLKKFCPYNTVLLDHGDPSINTVLTAPTD 312

Query: 312 KPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIHGGYEAKVDGFLPGGASLHS 371
           KPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLI+G YEAK DGFLPGGASLHS
Sbjct: 313 KPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIYGAYEAKADGFLPGGASLHS 372

Query: 372 CMTPHGPDTKSYEATIARGNDVGPNKITDTMAFMFESCLIPRISRWALESPFLDHDYYQC 431
           CMTPHGPDT +YEATIAR N + P+K+T TMAFMFES LIPR+  WALESPFLDHDYYQC
Sbjct: 373 CMTPHGPDTTTYEATIARVNAMAPSKLTGTMAFMFESALIPRVCHWALESPFLDHDYYQC 432

Query: 432 WIGLRSHFN 440
           WIGL+SHF+
Sbjct: 433 WIGLKSHFS 441


>AT5G54080.1 | Symbols: HGO | HGO (HOMOGENTISATE 1,2-DIOXYGENASE);
           homogentisate 1,2-dioxygenase | chr5:21963146-21965296
           FORWARD
          Length = 461

 Score =  752 bits (1941), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/429 (81%), Positives = 382/429 (89%)

Query: 12  YLSGFGNHFSSEALAGALPEAQNSPLICPYGLYAEQISGTSFTSPRNLNLFSWFYRVKPS 71
           Y SGFGNHFSSEA+AGALP  QNSPL+CPYGLYAEQISGTSFTSPR LN  SW YRVKPS
Sbjct: 13  YQSGFGNHFSSEAIAGALPLDQNSPLLCPYGLYAEQISGTSFTSPRKLNQRSWLYRVKPS 72

Query: 72  VTHEPFKPRVPCNGRILSEFNHSNSSTNPTQLRWKPMDSPDSPTDFIDGLSTVCGSGSSF 131
           VTHEPFKPRVP + +++SEF+ SNS TNPTQLRW+P D PDS  DF+DGL T+CG+GSSF
Sbjct: 73  VTHEPFKPRVPAHKKLVSEFDASNSRTNPTQLRWRPEDIPDSEIDFVDGLFTICGAGSSF 132

Query: 132 MRHGYAIHMYTANKSMNNCAFCNADGDFLIVPQQGRLFITTECGRLKVSPGEIAMLPQGF 191
           +RHG+AIHMY AN  M + AFCNADGDFL+VPQ GRL+I TECGRL V+PGEIA++PQGF
Sbjct: 133 LRHGFAIHMYVANTGMKDSAFCNADGDFLLVPQTGRLWIETECGRLLVTPGEIAVIPQGF 192

Query: 192 RFTVDLPDGPSRGYVAEIFGTHFQLPDLGPIGANGLAAPRDFLVPTAWFEDKSYPGYTIV 251
           RF++DLPDG SRGYVAEI+G HFQLPDLGPIGANGLAA RDFL PTAWFED   P YTIV
Sbjct: 193 RFSIDLPDGKSRGYVAEIYGAHFQLPDLGPIGANGLAASRDFLAPTAWFEDGLRPEYTIV 252

Query: 252 QKFGGELFSAVQDFSPFNVVAWRGNYVPYKYDLSKFCPYNTVLFDHSDPSINTVLTAPTD 311
           QKFGGELF+A QDFSPFNVVAW GNYVPYKYDL KFCPYNTVL DH DPSINTVLTAPTD
Sbjct: 253 QKFGGELFTAKQDFSPFNVVAWHGNYVPYKYDLKKFCPYNTVLLDHGDPSINTVLTAPTD 312

Query: 312 KPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIHGGYEAKVDGFLPGGASLHS 371
           KPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLI+G YEAK DGFLPGGASLHS
Sbjct: 313 KPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIYGAYEAKADGFLPGGASLHS 372

Query: 372 CMTPHGPDTKSYEATIARGNDVGPNKITDTMAFMFESCLIPRISRWALESPFLDHDYYQC 431
           CMTPHGPDT +YEATIAR N + P+K+T TMAFMFES LIPR+  WALESPFLDHDYYQC
Sbjct: 373 CMTPHGPDTTTYEATIARVNAMAPSKLTGTMAFMFESALIPRVCHWALESPFLDHDYYQC 432

Query: 432 WIGLRSHFN 440
           WIGL+SHF+
Sbjct: 433 WIGLKSHFS 441