Miyakogusa Predicted Gene

chr3.CM0253.430.nd
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr3.CM0253.430.nd + phase: 1 /pseudo/partial
         (290 letters)

Database: TAIR8_pep 
           32,825 sequences; 13,166,001 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G79930.2 | Symbols: HSP91 | HSP91 (Heat shock protein 91) | c...   265   2e-71
AT1G79930.1 | Symbols: HSP91 | HSP91 (Heat shock protein 91) | c...   265   2e-71
AT1G79920.1 | Symbols:  | heat shock protein 70, putative / HSP7...   262   2e-70
AT1G79920.2 | Symbols:  | heat shock protein 70, putative / HSP7...   260   6e-70
AT1G11660.1 | Symbols:  | heat shock protein, putative | chr1:39...   125   2e-29
AT1G11660.2 | Symbols:  | heat shock protein, putative | chr1:39...   125   2e-29

>AT1G79930.2 | Symbols: HSP91 | HSP91 (Heat shock protein 91) |
           chr1:30068817-30071960 REVERSE
          Length = 789

 Score =  265 bits (678), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 133/205 (64%), Positives = 159/205 (77%), Gaps = 3/205 (1%)

Query: 37  CVARGCALQWAILSPTLKVREFQVNESFPFSISLSWKXXXXXXXXXXXXNKPSTLVFPKG 96
           CV+RGCALQ AILSPT KVREFQV+ESFPFSISL+WK            N+ ST+VFPKG
Sbjct: 368 CVSRGCALQCAILSPTFKVREFQVHESFPFSISLAWKGAASEAQNGGAENQQSTIVFPKG 427

Query: 97  NPIPSFKQLTFFRTGTFSIDVQYDDVSGLTTPAKISSYTIGPFQSTKGEKAKVKVKVRLN 156
           NPIPS K LTF+R+GTFS+DVQY DV+ L  P KIS+YTIGPFQS+KGE+AK+KVKVRLN
Sbjct: 428 NPIPSVKALTFYRSGTFSVDVQYSDVNDLQAPPKISTYTIGPFQSSKGERAKLKVKVRLN 487

Query: 157 LHGIVYVESATLXXXXXXXVPVAKESAGESTKMETDEAS--APPSSNDNDVNMQDATTIP 214
           LHGIV VESATL       VPV KE + E+TKM++D+AS  A P+S D DVNMQDA    
Sbjct: 488 LHGIVSVESATLLEEEEVEVPVTKEHSEETTKMDSDKASAEAAPASGDCDVNMQDAKDT- 546

Query: 215 ADTPGAENGIPEAGDKPVQMDTDTK 239
           +D  G +NG+PE+ +KPVQM+TD+K
Sbjct: 547 SDATGTDNGVPESAEKPVQMETDSK 571


>AT1G79930.1 | Symbols: HSP91 | HSP91 (Heat shock protein 91) |
           chr1:30068674-30071960 REVERSE
          Length = 831

 Score =  265 bits (678), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 133/205 (64%), Positives = 159/205 (77%), Gaps = 3/205 (1%)

Query: 37  CVARGCALQWAILSPTLKVREFQVNESFPFSISLSWKXXXXXXXXXXXXNKPSTLVFPKG 96
           CV+RGCALQ AILSPT KVREFQV+ESFPFSISL+WK            N+ ST+VFPKG
Sbjct: 368 CVSRGCALQCAILSPTFKVREFQVHESFPFSISLAWKGAASEAQNGGAENQQSTIVFPKG 427

Query: 97  NPIPSFKQLTFFRTGTFSIDVQYDDVSGLTTPAKISSYTIGPFQSTKGEKAKVKVKVRLN 156
           NPIPS K LTF+R+GTFS+DVQY DV+ L  P KIS+YTIGPFQS+KGE+AK+KVKVRLN
Sbjct: 428 NPIPSVKALTFYRSGTFSVDVQYSDVNDLQAPPKISTYTIGPFQSSKGERAKLKVKVRLN 487

Query: 157 LHGIVYVESATLXXXXXXXVPVAKESAGESTKMETDEAS--APPSSNDNDVNMQDATTIP 214
           LHGIV VESATL       VPV KE + E+TKM++D+AS  A P+S D DVNMQDA    
Sbjct: 488 LHGIVSVESATLLEEEEVEVPVTKEHSEETTKMDSDKASAEAAPASGDCDVNMQDAKDT- 546

Query: 215 ADTPGAENGIPEAGDKPVQMDTDTK 239
           +D  G +NG+PE+ +KPVQM+TD+K
Sbjct: 547 SDATGTDNGVPESAEKPVQMETDSK 571


>AT1G79920.1 | Symbols:  | heat shock protein 70, putative / HSP70,
           putative | chr1:30064195-30067117 REVERSE
          Length = 736

 Score =  262 bits (669), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 132/205 (64%), Positives = 158/205 (77%), Gaps = 3/205 (1%)

Query: 37  CVARGCALQWAILSPTLKVREFQVNESFPFSISLSWKXXXXXXXXXXXXNKPSTLVFPKG 96
           CV+RGCALQ AILSPT KVREFQV+ESFPFSISL+WK            N+ ST+VFPKG
Sbjct: 368 CVSRGCALQCAILSPTFKVREFQVHESFPFSISLAWKGAATDAQNGGTENQQSTIVFPKG 427

Query: 97  NPIPSFKQLTFFRTGTFSIDVQYDDVSGLTTPAKISSYTIGPFQSTKGEKAKVKVKVRLN 156
           NPIPS K LTF+R+GTFSIDVQY DV+ L  P KIS+YTIGPFQS+KGE+AK+KVKVRLN
Sbjct: 428 NPIPSVKALTFYRSGTFSIDVQYSDVNDLQAPPKISTYTIGPFQSSKGERAKLKVKVRLN 487

Query: 157 LHGIVYVESATLXXXXXXXVPVAKESAGESTKMETDEAS--APPSSNDNDVNMQDATTIP 214
           LHGIV VESATL       V V K+ + E+ KM+TD+AS  A P+S D+DVNMQDA    
Sbjct: 488 LHGIVSVESATLLEEEEVEVSVTKDQSEETAKMDTDKASAEAAPASGDSDVNMQDAKDT- 546

Query: 215 ADTPGAENGIPEAGDKPVQMDTDTK 239
           +D  G +NG+PE+ +KPVQM+TD+K
Sbjct: 547 SDATGTDNGVPESAEKPVQMETDSK 571


>AT1G79920.2 | Symbols:  | heat shock protein 70, putative / HSP70,
           putative | chr1:30064195-30067117 REVERSE
          Length = 736

 Score =  260 bits (665), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 131/204 (64%), Positives = 157/204 (76%), Gaps = 3/204 (1%)

Query: 37  CVARGCALQWAILSPTLKVREFQVNESFPFSISLSWKXXXXXXXXXXXXNKPSTLVFPKG 96
           CV+RGCALQ AILSPT KVREFQV+ESFPFSISL+WK            N+ ST+VFPKG
Sbjct: 368 CVSRGCALQCAILSPTFKVREFQVHESFPFSISLAWKGAATDAQNGGTENQQSTIVFPKG 427

Query: 97  NPIPSFKQLTFFRTGTFSIDVQYDDVSGLTTPAKISSYTIGPFQSTKGEKAKVKVKVRLN 156
           NPIPS K LTF+R+GTFSIDVQY DV+ L  P KIS+YTIGPFQS+KGE+AK+KVKVRLN
Sbjct: 428 NPIPSVKALTFYRSGTFSIDVQYSDVNDLQAPPKISTYTIGPFQSSKGERAKLKVKVRLN 487

Query: 157 LHGIVYVESATLXXXXXXXVPVAKESAGESTKMETDEAS--APPSSNDNDVNMQDATTIP 214
           LHGIV VESATL       V V K+ + E+ KM+TD+AS  A P+S D+DVNMQDA    
Sbjct: 488 LHGIVSVESATLLEEEEVEVSVTKDQSEETAKMDTDKASAEAAPASGDSDVNMQDAKDT- 546

Query: 215 ADTPGAENGIPEAGDKPVQMDTDT 238
           +D  G +NG+PE+ +KPVQM+TD+
Sbjct: 547 SDATGTDNGVPESAEKPVQMETDS 570


>AT1G11660.1 | Symbols:  | heat shock protein, putative |
           chr1:3921056-3924347 FORWARD
          Length = 773

 Score =  125 bits (315), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/135 (48%), Positives = 87/135 (64%), Gaps = 11/135 (8%)

Query: 37  CVARGCALQWAILSPTLKVREFQVNESFPFSISLSWKXXXXXXXXXXXXNKPST-LVFPK 95
           CVARGCALQ A+LSP  +VR+++V +S+PF+I  S              N PS  L+FPK
Sbjct: 369 CVARGCALQCAMLSPVFRVRDYEVQDSYPFAIGFS--------SDKGPINTPSNELLFPK 420

Query: 96  GNPIPSFKQLTFFRTGTFSIDVQYDDVSGLT--TPAKISSYTIGPFQSTKGEKAKVKVKV 153
           G   PS K LT  R  TF ++  Y + + L+   P +ISS+ IGPF  + GE A+VKV+V
Sbjct: 421 GQIFPSVKVLTLHRENTFQLEAFYANHNELSPDIPTQISSFMIGPFHISHGEAARVKVRV 480

Query: 154 RLNLHGIVYVESATL 168
           +LNLHGIV ++SATL
Sbjct: 481 QLNLHGIVTIDSATL 495


>AT1G11660.2 | Symbols:  | heat shock protein, putative |
           chr1:3921056-3924347 FORWARD
          Length = 763

 Score =  125 bits (315), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 65/135 (48%), Positives = 87/135 (64%), Gaps = 11/135 (8%)

Query: 37  CVARGCALQWAILSPTLKVREFQVNESFPFSISLSWKXXXXXXXXXXXXNKPST-LVFPK 95
           CVARGCALQ A+LSP  +VR+++V +S+PF+I  S              N PS  L+FPK
Sbjct: 369 CVARGCALQCAMLSPVFRVRDYEVQDSYPFAIGFS--------SDKGPINTPSNELLFPK 420

Query: 96  GNPIPSFKQLTFFRTGTFSIDVQYDDVSGLT--TPAKISSYTIGPFQSTKGEKAKVKVKV 153
           G   PS K LT  R  TF ++  Y + + L+   P +ISS+ IGPF  + GE A+VKV+V
Sbjct: 421 GQIFPSVKVLTLHRENTFQLEAFYANHNELSPDIPTQISSFMIGPFHISHGEAARVKVRV 480

Query: 154 RLNLHGIVYVESATL 168
           +LNLHGIV ++SATL
Sbjct: 481 QLNLHGIVTIDSATL 495