Miyakogusa Predicted Gene
- chr3.CM0176.40.nc
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr3.CM0176.40.nc + phase: 0
(641 letters)
Database: TAIR8_pep
32,825 sequences; 13,166,001 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G45190.1 | Symbols: | cyclin family protein | chr5:18295035-... 565 e-161
AT4G19600.1 | Symbols: CYCT1;4 | CYCT1;4; cyclin-dependent prote... 526 e-149
AT4G19560.1 | Symbols: CYCT1;2 | CYCT1;2; cyclin-dependent prote... 340 2e-93
AT1G35440.1 | Symbols: CYCT1;1 | CYCT1;1; cyclin-dependent prote... 265 5e-71
AT1G27630.1 | Symbols: CYCT1;3 | CYCT1;3; cyclin-dependent prote... 261 8e-70
AT2G26430.1 | Symbols: ATRCY1, RCY1 | RCY1 (ARGININE-RICH CYCLIN... 149 5e-36
AT2G26430.3 | Symbols: ATRCY1, RCY1 | RCY1 (ARGININE-RICH CYCLIN... 117 2e-26
AT2G26430.2 | Symbols: ATRCY1, RCY1 | RCY1 (ARGININE-RICH CYCLIN... 117 2e-26
AT5G48630.1 | Symbols: | cyclin family protein | chr5:19738889-... 84 2e-16
AT5G48640.1 | Symbols: | cyclin family protein | chr5:19740879-... 80 5e-15
AT5G27620.1 | Symbols: CYCH;1 | CYCH;1 (CYCLIN H;1); cyclin-depe... 45 1e-04
>AT5G45190.1 | Symbols: | cyclin family protein |
chr5:18295035-18297960 REVERSE
Length = 579
Score = 565 bits (1456), Expect = e-161, Method: Compositional matrix adjust.
Identities = 340/651 (52%), Positives = 419/651 (64%), Gaps = 87/651 (13%)
Query: 1 MAGLLLGDISHHXXXXXXXXXXXXDNQEYGSRWYFSRKEIEENSPSKQDGVDLKKEAYLR 60
MAG+L G+ S+ + QE SRWYF RKEIEENSPS+ DG+DLKKE YLR
Sbjct: 1 MAGVLAGECSYSESGVSSHSRNSHEKQEEVSRWYFGRKEIEENSPSRLDGIDLKKETYLR 60
Query: 61 KSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKNDRRIIATVCMFLAGKVEETP 120
KSYCTFLQDLGMRLKVPQVTIATAIIFCHRFF RQSHAKNDRR IATVCMFLAGKVEETP
Sbjct: 61 KSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFFRQSHAKNDRRTIATVCMFLAGKVEETP 120
Query: 121 RPLKDVILVSYEIIHKKDPAAVQRIKQKDVYEQQKELILLGERVVLATLGFDLNVHHPYK 180
RPLKDVI VSYEII+KKDP A Q+IKQK+VYEQQKELIL GE++VL+TLGFDLNV+HPYK
Sbjct: 121 RPLKDVIFVSYEIINKKDPGASQKIKQKEVYEQQKELILNGEKIVLSTLGFDLNVYHPYK 180
Query: 181 PLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSD 240
PLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSD
Sbjct: 181 PLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSD 240
Query: 241 GEKVWWQEFDVTPRQLEEVSNQMLELYEQNRM--AQSNDVEGTTGGGNRATPKAPTSNDE 298
GEKVWWQEFDVTPRQLE+VSNQMLELYEQNR+ +Q ++VE + GGG+ P +
Sbjct: 241 GEKVWWQEFDVTPRQLEDVSNQMLELYEQNRVPASQGSEVESSVGGGSAQRPGSRN---- 296
Query: 299 AASTNRNLHIGGPSSTLETSKPATSKNVFVSSANHVGRPVSNHG---VSGSTEVKHPVED 355
A ST+ ++ SS T + + S N SS + + N G + S + K +E
Sbjct: 297 AVSTDEHVGSRQTSSVRSTHEQSNSDNHGGSSKGVLNQNNENGGGEAANVSVDNKEEIER 356
Query: 356 DVK-GNLHPKQEPSAYEENMQEAQDMVRSRSGYAKGNQHPKQEPSTYEEKMQEAQDMVRS 414
+ K +LH + P A+++N++EA N P E
Sbjct: 357 ETKESSLHLESHP-AHKDNVREAPH-----------NSRPLVE----------------- 387
Query: 415 RSGYGKEQESNVGRSNIKEEDVELNDK---HSSKNLNHRDATFA-SPNLEGIKKIDRDKV 470
G+ N + E EL D H S+N++ DA + SP K+ RDKV
Sbjct: 388 ----------GPGKDNSEREGGELQDDGAVHKSRNVDVGDALISQSPK---DLKLLRDKV 434
Query: 471 KAALEKRKKATGNISKKTELVDDEDLIERVRELEDGIELAAQSEKNKQDGRKSLSKSLDR 530
KA EK KK G ++K +L+D++DLIE RELED ++LA + EK K+ +S K+ +
Sbjct: 435 KAKREKAKKLLGERTRKKDLMDEDDLIE--RELED-VQLAVEDEKTKERKVQSRPKA-EN 490
Query: 531 SAFENMQHGKHQDHSEEHLHLVKPSHEADLSAVEEGEVSALDDIDLGPKSSNQKRKVESS 590
S +HG+ D VK ++ EEGE + + ++ P ++KRK+ S
Sbjct: 491 SDLMGTEHGEILD--------VK----GEVKNTEEGE---MVNNNVSPMMHSRKRKMGSP 535
Query: 591 PDNFVEGKKRHNYGSGSTHHNRIDYIEDRNKVNRLG--HAERDSKRHIQEN 639
P+ EGK+RHN +G E+ +K +R H +R+ +RH QEN
Sbjct: 536 PEKQSEGKRRHNSENG----------EESHKTSRGSSHHGDREHRRHSQEN 576
>AT4G19600.1 | Symbols: CYCT1;4 | CYCT1;4; cyclin-dependent protein
kinase | chr4:10673629-10676542 FORWARD
Length = 541
Score = 526 bits (1356), Expect = e-149, Method: Compositional matrix adjust.
Identities = 324/648 (50%), Positives = 408/648 (62%), Gaps = 118/648 (18%)
Query: 1 MAGLLLGDISHHXXXXXXXXXXXXDNQEYGSRWYFSRKEIEENSPSKQDGVDLKKEAYLR 60
MAG+L GD S + Q+ +RWYF RKEIEENSPS+ D +DLKKE YLR
Sbjct: 1 MAGVLAGDCSFGESGVSSYSRNSNEKQDEVARWYFGRKEIEENSPSRLDSIDLKKETYLR 60
Query: 61 KSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKNDRRIIATVCMFLAGKVEETP 120
KSYCTFLQDLGMRLKVPQVTIATAIIFCHRFF+RQSHA+NDRR IATVCMFLAGKVEETP
Sbjct: 61 KSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFIRQSHARNDRRTIATVCMFLAGKVEETP 120
Query: 121 RPLKDVILVSYEIIHKKDPAAVQRIKQKDVYEQQKELILLGERVVLATLGFDLNVHHPYK 180
RPLKDVI+VSYEIIHKKDP Q+IKQK+VYEQQKELIL GE++VL+TLGFD NV+HPYK
Sbjct: 121 RPLKDVIVVSYEIIHKKDPTTAQKIKQKEVYEQQKELILNGEKIVLSTLGFDFNVYHPYK 180
Query: 181 PLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSD 240
PLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSD
Sbjct: 181 PLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSD 240
Query: 241 GEKVWWQEFDVTPRQLEEVSNQMLELYEQNRM--AQSNDVEGTTGGGNRATPKAPTSNDE 298
GEKVWWQEFDVTPRQLE+VSNQMLELYEQNR+ +Q ++VE + GGG+
Sbjct: 241 GEKVWWQEFDVTPRQLEDVSNQMLELYEQNRVPASQVSEVESSVGGGSAH---------- 290
Query: 299 AASTNRNLHIGGPSSTLETSKPATSKNVFVSSANHVGRPVSN-HGVSGS--TEVKHPVED 355
H+G S T + + S N+ S+ R N G +GS TE K +
Sbjct: 291 --------HVGSRPSARLTHEHSNSDNLGGSTKATQNRSNDNGSGEAGSVITEQKGERDT 342
Query: 356 DVKGNLHPKQEPSAYEENMQEAQDMVRSRSGYAKGNQHPKQEPSTYEEKMQEAQDMVRSR 415
+ K ++H + P+ +SRSG + P E+K+++A
Sbjct: 343 ETKDSMHTESHPAH------------KSRSGV--------EAPG--EDKIEKAG------ 374
Query: 416 SGYGKEQESNVGRSNIKEEDVELNDKHSSKNLNHRDATFASPNLEGIKKIDRDKVKAALE 475
+ + ++ +S + + DV ++ S K++ K+ RDKVKA LE
Sbjct: 375 AHFPEDDKSRI----VGTADVTVS--QSPKDI----------------KMFRDKVKAKLE 412
Query: 476 KRKKATGNISKKTELVDDEDLIERVRELEDGIELAAQSEKNKQDGRKSLSKSLDRSAFEN 535
KK G ++K +LVD++DLIE RELED +ELA + +K+ Q+ + S+
Sbjct: 413 A-KKVQGEKTRKKDLVDEDDLIE--RELED-VELAVEDDKDIQN-KSSM----------G 457
Query: 536 MQHGKHQDHSEEHLHLVKPSHEADLSAVEEGEVSALDDIDLGPKSSNQKRKVESSPD-NF 594
+HG+ D + +LV EEGE+ +DD+ ++KRK+ES +
Sbjct: 458 TEHGEILDGN----NLV--------VNTEEGEM--IDDV--SSTMPSRKRKMESPCEKQL 501
Query: 595 VEGKKRHNYGSGSTHHNRIDYIEDRNKVNRLG----HAERDSKRHIQE 638
EGK+RH+ + +E+ K N G + +R+ +RH QE
Sbjct: 502 GEGKRRHDNS---------ENVEEGQKTNPGGSSHSYGDREPRRHSQE 540
>AT4G19560.1 | Symbols: CYCT1;2 | CYCT1;2; cyclin-dependent protein
kinase | chr4:10661914-10664379 FORWARD
Length = 460
Score = 340 bits (871), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 179/285 (62%), Positives = 213/285 (74%), Gaps = 15/285 (5%)
Query: 33 WYFSRKEIEENSPSKQDGVDLKKEAYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFF 92
W+FSR+EIE NSPS++DG+DLK E LR SYCTFL+ LG RLKVPQVTIATAI FCHRFF
Sbjct: 31 WFFSREEIERNSPSRRDGIDLKTETRLRDSYCTFLEILGERLKVPQVTIATAIFFCHRFF 90
Query: 93 LRQSHAKNDRRIIATVCMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAVQRIKQKDVYE 152
LRQSHAKNDR+ IATVCM LAGKVEETP L+DVI+ SYE IHKKD A QR K+VY+
Sbjct: 91 LRQSHAKNDRQTIATVCMLLAGKVEETPVTLEDVIIASYERIHKKDLAGAQR---KEVYD 147
Query: 153 QQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKV--AQNALAQVAWNFVNDGLRT 210
QQKEL+L+GE +VL+TL FDL + HPYKPLVEAIKK+ V A+ LAQ AWNFVND LRT
Sbjct: 148 QQKELVLIGEELVLSTLNFDLCISHPYKPLVEAIKKYMVEDAKTQLAQFAWNFVNDCLRT 207
Query: 211 SLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQN 270
+LCLQ++PHHIAAGAI LAA+ V L S E V QEFD+TP QLE++ Q+LELYE+
Sbjct: 208 TLCLQYQPHHIAAGAILLAAELPTVDLQSYRE-VLCQEFDITPCQLEDIRGQILELYERI 266
Query: 271 RMAQSNDVEGTTGGG---------NRATPKAPTSNDEAASTNRNL 306
+Q + VE + G +T K P+S+ E S+ NL
Sbjct: 267 PTSQESKVESSGGVAVVHQPISRDMASTEKCPSSDIEGGSSQVNL 311
>AT1G35440.1 | Symbols: CYCT1;1 | CYCT1;1; cyclin-dependent protein
kinase | chr1:13035272-13036015 REVERSE
Length = 247
Score = 265 bits (678), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 123/240 (51%), Positives = 169/240 (70%), Gaps = 9/240 (3%)
Query: 33 WYFSRKEIEENSPSKQDGVDLKKEAYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFF 92
WY +R+ IE+ SPS+ DG++LK+E + R SY +FLQ+LG RL PQ TIATAI+ C RFF
Sbjct: 7 WYNTREAIEKTSPSRLDGINLKEETFQRWSYTSFLQELGQRLNNPQKTIATAIVLCQRFF 66
Query: 93 LRQSHAKNDRRIIATVCMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAVQRIKQKDVYE 152
RQS KND + +A +CMF+AGKVE +PRP DV+ VSY ++ K+P +DV+E
Sbjct: 67 TRQSLTKNDPKTVAIICMFIAGKVEGSPRPAGDVVFVSYRVLFNKEPL-------RDVFE 119
Query: 153 QQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNA--LAQVAWNFVNDGLRT 210
+ K +L GE++VL+TL DL + HPYK +++ +K+ ++ L Q A+NFVND LRT
Sbjct: 120 RLKMTVLTGEKLVLSTLECDLEIEHPYKLVMDWVKRSVKTEDGRRLCQAAFNFVNDSLRT 179
Query: 211 SLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQN 270
SLCLQF P IA+ AI++ K+ LP DG+K WW+EFDVT RQL E+ +QML+LY Q+
Sbjct: 180 SLCLQFGPSQIASAAIYIGLSMCKMTLPCDGDKAWWREFDVTKRQLWEICDQMLDLYVQD 239
>AT1G27630.1 | Symbols: CYCT1;3 | CYCT1;3; cyclin-dependent protein
kinase | chr1:9611634-9613954 FORWARD
Length = 317
Score = 261 bits (668), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 126/238 (52%), Positives = 167/238 (70%), Gaps = 3/238 (1%)
Query: 31 SRWYFSRKEIEENSPSKQDGVDLKKEAYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHR 90
S+WYFSR+EIE SPS++DG+DL KE++LR SYCTFLQ LGM+L V QVTI+ A++ CHR
Sbjct: 32 SKWYFSREEIERFSPSRKDGIDLVKESFLRSSYCTFLQRLGMKLHVSQVTISCAMVMCHR 91
Query: 91 FFLRQSHAKNDRRIIATVCMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAVQRIKQKDV 150
F++RQSHAKND + IAT +FLA K E+ P L V++ SYEII++ DP+A RI Q +
Sbjct: 92 FYMRQSHAKNDWQTIATSSLFLACKAEDEPCQLSSVVVASYEIIYEWDPSASIRIHQTEC 151
Query: 151 YEQQKELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRT 210
Y + KE+IL GE ++L+T F L++ PYKPL A+ + A LA AWNFV+D +RT
Sbjct: 152 YHEFKEIILSGESLLLSTSAFHLDIELPYKPLAAALNRLN-AWPDLATAAWNFVHDWIRT 210
Query: 211 SLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYE 268
+LCLQ+KPH IA + LAA F K+ S + WW EF VT + L+EV +M L E
Sbjct: 211 TLCLQYKPHVIATATVHLAATFQNAKVGSRRD--WWLEFGVTTKLLKEVIQEMCTLIE 266
>AT2G26430.1 | Symbols: ATRCY1, RCY1 | RCY1 (ARGININE-RICH CYCLIN
1); cyclin-dependent protein kinase regulator |
chr2:11250511-11252582 REVERSE
Length = 416
Score = 149 bits (376), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 91/297 (30%), Positives = 158/297 (53%), Gaps = 16/297 (5%)
Query: 33 WYFSRKEIEENSPSKQDGVDLKKEAYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFF 92
+Y S ++++ SPS++DG+D E LR C +Q+ G+ LK+PQ +AT + RF+
Sbjct: 9 FYLSDEQLKA-SPSRKDGIDETTEISLRIYGCDLIQEGGILLKLPQAVMATGQVLFQRFY 67
Query: 93 LRQSHAKNDRRIIATVCMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAVQRIKQKDVYE 152
++S AK D +I+A C++LA K+EE P+ + VI+V + + +++ ++ + D+Y
Sbjct: 68 CKKSLAKFDVKIVAASCVWLASKLEENPKKARQVIIVFHRMECRRENLPLEHL---DMYA 124
Query: 153 QQ----KELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGL 208
++ K + ER +L +GF +V HP+K + + + L Q AWN ND L
Sbjct: 125 KKFSELKVELSRTERHILKEMGFVCHVEHPHKFISNYLATLETPPE-LRQEAWNLANDSL 183
Query: 209 RTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYE 268
RT+LC++F+ +A G ++ AA+ +V LP + WW+ FD ++EV + LY
Sbjct: 184 RTTLCVRFRSEVVACGVVYAAARRFQVPLPENPP--WWKAFDADKSSIDEVCRVLAHLYS 241
Query: 269 QNRMAQSNDVEGTTGGGNRATPKAPTSNDEAASTNRNLHIGGPSSTLETSKPATSKN 325
+ AQ V G T + + N + S ++L + G ++T A S N
Sbjct: 242 LPK-AQYISV---CKDGKPFTFSSRSGNSQGQSATKDL-LPGAGEAVDTKCTAGSAN 293
>AT2G26430.3 | Symbols: ATRCY1, RCY1 | RCY1 (ARGININE-RICH CYCLIN 1)
| chr2:11250511-11252333 REVERSE
Length = 361
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 128/249 (51%), Gaps = 15/249 (6%)
Query: 81 IATAIIFCHRFFLRQSHAKNDRRIIATVCMFLAGKVEETPRPLKDVILVSYEIIHKKDPA 140
+AT + RF+ ++S AK D +I+A C++LA K+EE P+ + VI+V + + +++
Sbjct: 1 MATGQVLFQRFYCKKSLAKFDVKIVAASCVWLASKLEENPKKARQVIIVFHRMECRRENL 60
Query: 141 AVQRIKQKDVYEQQ----KELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNAL 196
++ + D+Y ++ K + ER +L +GF +V HP+K + + + L
Sbjct: 61 PLEHL---DMYAKKFSELKVELSRTERHILKEMGFVCHVEHPHKFISNYLATLETPPE-L 116
Query: 197 AQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQL 256
Q AWN ND LRT+LC++F+ +A G ++ AA+ +V LP + WW+ FD +
Sbjct: 117 RQEAWNLANDSLRTTLCVRFRSEVVACGVVYAAARRFQVPLPENPP--WWKAFDADKSSI 174
Query: 257 EEVSNQMLELYEQNRMAQSNDVEGTTGGGNRATPKAPTSNDEAASTNRNLHIGGPSSTLE 316
+EV + LY + AQ V G T + + N + S ++L + G ++
Sbjct: 175 DEVCRVLAHLYSLPK-AQYISV---CKDGKPFTFSSRSGNSQGQSATKDL-LPGAGEAVD 229
Query: 317 TSKPATSKN 325
T A S N
Sbjct: 230 TKCTAGSAN 238
>AT2G26430.2 | Symbols: ATRCY1, RCY1 | RCY1 (ARGININE-RICH CYCLIN 1)
| chr2:11250511-11252333 REVERSE
Length = 361
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 128/249 (51%), Gaps = 15/249 (6%)
Query: 81 IATAIIFCHRFFLRQSHAKNDRRIIATVCMFLAGKVEETPRPLKDVILVSYEIIHKKDPA 140
+AT + RF+ ++S AK D +I+A C++LA K+EE P+ + VI+V + + +++
Sbjct: 1 MATGQVLFQRFYCKKSLAKFDVKIVAASCVWLASKLEENPKKARQVIIVFHRMECRRENL 60
Query: 141 AVQRIKQKDVYEQQ----KELILLGERVVLATLGFDLNVHHPYKPLVEAIKKFKVAQNAL 196
++ + D+Y ++ K + ER +L +GF +V HP+K + + + L
Sbjct: 61 PLEHL---DMYAKKFSELKVELSRTERHILKEMGFVCHVEHPHKFISNYLATLETPPE-L 116
Query: 197 AQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWWQEFDVTPRQL 256
Q AWN ND LRT+LC++F+ +A G ++ AA+ +V LP + WW+ FD +
Sbjct: 117 RQEAWNLANDSLRTTLCVRFRSEVVACGVVYAAARRFQVPLPENPP--WWKAFDADKSSI 174
Query: 257 EEVSNQMLELYEQNRMAQSNDVEGTTGGGNRATPKAPTSNDEAASTNRNLHIGGPSSTLE 316
+EV + LY + AQ V G T + + N + S ++L + G ++
Sbjct: 175 DEVCRVLAHLYSLPK-AQYISV---CKDGKPFTFSSRSGNSQGQSATKDL-LPGAGEAVD 229
Query: 317 TSKPATSKN 325
T A S N
Sbjct: 230 TKCTAGSAN 238
>AT5G48630.1 | Symbols: | cyclin family protein |
chr5:19738889-19740426 REVERSE
Length = 253
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 110/233 (47%), Gaps = 17/233 (7%)
Query: 48 QDGVDLKKEAYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKNDRRIIAT 107
Q G+ ++ ++ ++ L +K+ Q +ATA+ + R + R+S + + R++A
Sbjct: 29 QRGISVEDFRLIKLHMSNYISKLAQHIKIRQRVVATAVTYMRRVYTRKSLTEYEPRLVAP 88
Query: 108 VCMFLAGKVEETPRPLKDVILVSYEIIHKKDPAAVQRIKQKDVYEQQKELILLGERVVLA 167
C++LA K EE+ K +LV Y ++++ + + + + IL E VL
Sbjct: 89 TCLYLACKAEESVVHAK--LLVFY----------MKKLYADEKFRYEIKDILEMEMKVLE 136
Query: 168 TLGFDLNVHHPYKPLVEAIKKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIF 227
L F L V HPY+ L E ++ + ++ + W VND R L L P I I+
Sbjct: 137 ALNFYLVVFHPYRSLPEFLQDSGINDTSMTHLTWGLVNDTYRMDLILIHPPFLITLACIY 196
Query: 228 LAAKFLKVKLPSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNRMAQSNDVEG 280
+A+ V D K W++E V ++ ++ ++L+ YE +R+ V
Sbjct: 197 IAS----VHKEKDI-KTWFEELSVDMNIVKNIAMEILDFYENHRLFTEERVHA 244
>AT5G48640.1 | Symbols: | cyclin family protein |
chr5:19740879-19742867 REVERSE
Length = 253
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 17/205 (8%)
Query: 67 LQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKNDRRIIATVCMFLAGKVEETPRPLKDV 126
+ L +KV Q +ATAI + R ++R+S + + R++A C++LA K EE+ ++
Sbjct: 48 IMKLAQHIKVRQRVVATAITYMRRVYIRKSMVEFEPRLVALTCLYLASKAEESIVQARN- 106
Query: 127 ILVSYEIIHKKDPAAVQRIKQKDVYEQQKELILLGERVVLATLGFDLNVHHPYKPLVEAI 186
LV Y I + P + + KD IL E VL L + L V HPY+ L E +
Sbjct: 107 -LVFY--IKRLYPDEYNKYELKD--------ILGMEMKVLEALDYYLVVFHPYRSLSEFL 155
Query: 187 KKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKLPSDGEKVWW 246
+ + + Q+ W VND + L L P+ IA I++A+ + + + W+
Sbjct: 156 QDAALNDVNMNQITWGIVNDTYKMDLILVHPPYRIALACIYIASVHREKDITA-----WF 210
Query: 247 QEFDVTPRQLEEVSNQMLELYEQNR 271
++ ++ ++ ++L+ YE R
Sbjct: 211 EDLHEDMNLVKNIAMEILDFYENYR 235
>AT5G27620.1 | Symbols: CYCH;1 | CYCH;1 (CYCLIN H;1);
cyclin-dependent protein kinase/ protein binding /
protein kinase | chr5:9771765-9774687 FORWARD
Length = 336
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 31/190 (16%)
Query: 56 EAYLRKSYCTFLQDLGMRLKVPQVTIATAIIFCHRFFLRQSHAKNDRRIIATVCMFLAGK 115
E ++R Y +Q++ P ATA+ + RF+L+ S ++ + I C++ A K
Sbjct: 76 ERFMRAFYEAKVQEVCSAFAFPHKIQATALQYFKRFYLQWSVMQHHPKEIMLTCVYAACK 135
Query: 116 VEETPRPLKDVILVSYEIIHKKDPAAVQRIKQKDVYEQQKELILLGERVVLATLGFDLNV 175
+EE VS E I K Q +IL E VL +L FDL V
Sbjct: 136 IEENH--------VSAEEIGKG-------------INQDHRIILKYEMAVLQSLEFDLIV 174
Query: 176 HHPYKPL---VEAIKKFKVAQN-------ALAQVAWNFVNDGLRTSLCLQFKPHHIAAGA 225
+ PY+ + V +++F A++ +L + A + + T L F P +A +
Sbjct: 175 YAPYRAIEGFVNNMEEFLQARDDEIQKLESLLKGATAEADKVMLTDAPLLFPPGQLALAS 234
Query: 226 IFLAAKFLKV 235
+ +A L V
Sbjct: 235 LRIANGVLGV 244