Miyakogusa Predicted Gene
- chr3.CM0160.970.nd
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr3.CM0160.970.nd + phase: 0 /partial
(263 letters)
Database: TAIR8_pep
32,825 sequences; 13,166,001 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G03840.1 | Symbols: MGP | MGP (MAGPIE); nucleic acid binding ... 348 2e-96
AT5G44160.1 | Symbols: NUC | NUC (NUTCRACKER); nucleic acid bind... 347 6e-96
AT1G03840.2 | Symbols: MGP | MGP (MAGPIE); nucleic acid binding ... 337 3e-93
AT5G66730.1 | Symbols: | zinc finger (C2H2 type) family protein... 327 3e-90
AT3G50700.1 | Symbols: ATIDD2 | ATIDD2 (ARABIDOPSIS THALIANA IND... 323 6e-89
AT1G55110.1 | Symbols: ATIDD7 | ATIDD7 (ARABIDOPSIS THALIANA IND... 320 8e-88
AT3G13810.1 | Symbols: ATIDD11 | ATIDD11 (ARABIDOPSIS THALIANA I... 314 3e-86
AT2G02080.1 | Symbols: ATIDD4 | ATIDD4 (ARABIDOPSIS THALIANA IND... 313 5e-86
AT4G02670.1 | Symbols: ATIDD12 | ATIDD12 (ARABIDOPSIS THALIANA I... 312 2e-85
AT3G45260.1 | Symbols: | zinc finger (C2H2 type) family protein... 310 5e-85
AT1G14580.1 | Symbols: | zinc finger (C2H2 type) family protein... 307 4e-84
AT5G03150.1 | Symbols: JKD | JKD (JACKDAW); nucleic acid binding... 306 8e-84
AT2G02070.1 | Symbols: ATIDD5 | ATIDD5 (ARABIDOPSIS THALIANA IND... 306 1e-83
AT2G02080.2 | Symbols: ATIDD4 | ATIDD4 (ARABIDOPSIS THALIANA IND... 272 2e-73
AT5G60470.1 | Symbols: | zinc finger (C2H2 type) family protein... 255 2e-68
AT1G68130.1 | Symbols: ATIDD14 | ATIDD14 (ARABIDOPSIS THALIANA I... 229 1e-60
AT2G01940.1 | Symbols: SGR5, ATIDD15 | ATIDD15/SGR5 (ARABIDOPSIS... 226 1e-59
AT2G01940.3 | Symbols: SGR5, ATIDD15 | ATIDD15/SGR5 (ARABIDOPSIS... 216 1e-56
AT1G25250.1 | Symbols: ATIDD16 | ATIDD16 (ARABIDOPSIS THALIANA I... 213 8e-56
AT1G68130.2 | Symbols: ATIDD14 | ATIDD14 (ARABIDOPSIS THALIANA I... 157 6e-39
AT2G01940.2 | Symbols: SGR5, ATIDD15 | ATIDD15/SGR5 (ARABIDOPSIS... 156 1e-38
AT1G34370.1 | Symbols: STOP1 | STOP1 (SENSITIVE TO PROTON RHIZOT... 94 6e-20
AT1G34370.2 | Symbols: STOP1 | STOP1 (SENSITIVE TO PROTON RHIZOT... 94 6e-20
AT1G34370.3 | Symbols: STOP1 | STOP1 (SENSITIVE TO PROTON RHIZOT... 94 7e-20
AT5G22890.1 | Symbols: | zinc finger (C2H2 type) family protein... 91 7e-19
AT1G13290.1 | Symbols: | zinc finger (C2H2 type) family protein... 84 8e-17
AT1G34790.1 | Symbols: TT1 | TT1 (TRANSPARENT TESTA 1); transcri... 83 2e-16
AT3G20880.1 | Symbols: | zinc finger (C2H2 type) protein (WIP4)... 81 5e-16
AT1G08290.1 | Symbols: | zinc finger (C2H2 type) protein (WIP3)... 81 6e-16
AT3G57670.1 | Symbols: NTT | NTT (NO TRANSMITTING TRACT); nuclei... 80 1e-15
AT1G51220.1 | Symbols: | zinc finger (C2H2 type) protein (WIP5)... 80 2e-15
>AT1G03840.1 | Symbols: MGP | MGP (MAGPIE); nucleic acid binding /
protein binding / transcription factor/ zinc ion binding
| chr1:967595-970057 REVERSE
Length = 506
Score = 348 bits (892), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 156/167 (93%), Positives = 166/167 (99%)
Query: 28 LKRKRNLPGNPDPEAEVIALSPKTLMATNRFVCEICLKGFQRDQNLQLHRRGHNLPWKLK 87
+K+KRNLPGNPDPEAEVIALSPKTLMATNRF+CEIC KGFQRDQNLQLHRRGHNLPWKLK
Sbjct: 40 VKKKRNLPGNPDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLK 99
Query: 88 QRTSKEVRKRVYVCPEKTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQS 147
QRTSKEVRKRVYVCPEK+CVHHHP+RALGDLTGIKKHFCRKHGEKKWKCEKC+KRYAVQS
Sbjct: 100 QRTSKEVRKRVYVCPEKSCVHHHPTRALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQS 159
Query: 148 DWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFCDALAEETAKVNA 194
DWKAHSKTCGTREY+CDCGT+FSRRDSFITHRAFCDALAEETA++NA
Sbjct: 160 DWKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFCDALAEETARLNA 206
>AT5G44160.1 | Symbols: NUC | NUC (NUTCRACKER); nucleic acid binding
/ transcription factor/ zinc ion binding |
chr5:17790318-17792740 FORWARD
Length = 466
Score = 347 bits (889), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 169/239 (70%), Positives = 185/239 (77%), Gaps = 20/239 (8%)
Query: 28 LKRKRNLPGNPDPEAEVIALSPKTLMATNRFVCEICLKGFQRDQNLQLHRRGHNLPWKLK 87
+K+KRNLPGNPDPEAEVIALSP TLMATNRF+CE+C KGFQRDQNLQLHRRGHNLPWKLK
Sbjct: 36 VKKKRNLPGNPDPEAEVIALSPTTLMATNRFLCEVCGKGFQRDQNLQLHRRGHNLPWKLK 95
Query: 88 QRTSKEVRKRVYVCPEKTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQS 147
QRTSKEVRKRVYVCPEKTCVHHH SRALGDLTGIKKHFCRKHGEKKW CEKC+KRYAVQS
Sbjct: 96 QRTSKEVRKRVYVCPEKTCVHHHSSRALGDLTGIKKHFCRKHGEKKWTCEKCAKRYAVQS 155
Query: 148 DWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFCDALAEETAKVNATX------XXXXX 201
DWKAHSKTCGTREY+CDCGT+FSRRDSFITHRAFCDALAEETAK+NA
Sbjct: 156 DWKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFCDALAEETAKINAVSHLNGLAAAGAP 215
Query: 202 XXXXMGYTFMQQTPLGPTMATHFSSIFKPISCTEEETGNNNHQ-----TPRGLSLWMTQ 255
+ Y ++ T + P +P + N++HQ T LSLWM Q
Sbjct: 216 GSVNLNYQYLMGTFIPP---------LQPFVPQPQTNPNHHHQHFQPPTSSSLSLWMGQ 265
>AT1G03840.2 | Symbols: MGP | MGP (MAGPIE); nucleic acid binding /
zinc ion binding | chr1:967595-970057 REVERSE
Length = 504
Score = 337 bits (865), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 154/167 (92%), Positives = 164/167 (98%), Gaps = 2/167 (1%)
Query: 28 LKRKRNLPGNPDPEAEVIALSPKTLMATNRFVCEICLKGFQRDQNLQLHRRGHNLPWKLK 87
+K+KRNLPGNP EAEVIALSPKTLMATNRF+CEIC KGFQRDQNLQLHRRGHNLPWKLK
Sbjct: 40 VKKKRNLPGNP--EAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLK 97
Query: 88 QRTSKEVRKRVYVCPEKTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQS 147
QRTSKEVRKRVYVCPEK+CVHHHP+RALGDLTGIKKHFCRKHGEKKWKCEKC+KRYAVQS
Sbjct: 98 QRTSKEVRKRVYVCPEKSCVHHHPTRALGDLTGIKKHFCRKHGEKKWKCEKCAKRYAVQS 157
Query: 148 DWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFCDALAEETAKVNA 194
DWKAHSKTCGTREY+CDCGT+FSRRDSFITHRAFCDALAEETA++NA
Sbjct: 158 DWKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFCDALAEETARLNA 204
>AT5G66730.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr5:26659140-26661109 REVERSE
Length = 500
Score = 327 bits (839), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 146/163 (89%), Positives = 156/163 (95%)
Query: 29 KRKRNLPGNPDPEAEVIALSPKTLMATNRFVCEICLKGFQRDQNLQLHRRGHNLPWKLKQ 88
K+KRNLPG PDP+AEVIALSPKTLMATNRFVCEIC KGFQRDQNLQLHRRGHNLPWKL+Q
Sbjct: 32 KKKRNLPGMPDPDAEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQ 91
Query: 89 RTSKEVRKRVYVCPEKTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSD 148
R++KEVRK+VYVCP CVHH PSRALGDLTGIKKHFCRKHGEKKWKCEKCSK+YAVQSD
Sbjct: 92 RSTKEVRKKVYVCPVSGCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKKYAVQSD 151
Query: 149 WKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFCDALAEETAK 191
WKAHSK CGT+EYKCDCGT+FSRRDSFITHRAFCDALAEE+AK
Sbjct: 152 WKAHSKICGTKEYKCDCGTLFSRRDSFITHRAFCDALAEESAK 194
>AT3G50700.1 | Symbols: ATIDD2 | ATIDD2 (ARABIDOPSIS THALIANA
INDETERMINATE(ID)-DOMAIN 2); nucleic acid binding /
transcription factor/ zinc ion binding |
chr3:18851926-18853810 FORWARD
Length = 452
Score = 323 bits (828), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 142/163 (87%), Positives = 157/163 (96%)
Query: 29 KRKRNLPGNPDPEAEVIALSPKTLMATNRFVCEICLKGFQRDQNLQLHRRGHNLPWKLKQ 88
K+KRNLPG PDPE+EVIALSPKTL+ATNRFVCEIC KGFQRDQNLQLHRRGHNLPWKL+Q
Sbjct: 34 KKKRNLPGMPDPESEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLRQ 93
Query: 89 RTSKEVRKRVYVCPEKTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSD 148
+++KEV+K+VYVCPE +CVHH PSRALGDLTGIKKHFCRKHGEKKWKC+KCSK+YAVQSD
Sbjct: 94 KSNKEVKKKVYVCPEVSCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQSD 153
Query: 149 WKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFCDALAEETAK 191
WKAHSK CGT+EYKCDCGT+FSRRDSFITHRAFCDALAEE A+
Sbjct: 154 WKAHSKICGTKEYKCDCGTLFSRRDSFITHRAFCDALAEENAR 196
>AT1G55110.1 | Symbols: ATIDD7 | ATIDD7 (ARABIDOPSIS THALIANA
INDETERMINATE(ID)-DOMAIN 7); nucleic acid binding /
transcription factor/ zinc ion binding |
chr1:20564073-20566292 REVERSE
Length = 455
Score = 320 bits (819), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 145/166 (87%), Positives = 159/166 (95%), Gaps = 1/166 (0%)
Query: 28 LKRKRNLPGNPDPEAEVIALSPKTLMATNRFVCEICLKGFQRDQNLQLHRRGHNLPWKLK 87
LKRKRN PGNPDPEAEV+ALSPKTLMATNRF+CE+C KGFQRDQNLQLH+RGHNLPWKLK
Sbjct: 62 LKRKRNQPGNPDPEAEVMALSPKTLMATNRFICEVCNKGFQRDQNLQLHKRGHNLPWKLK 121
Query: 88 QRTSKEV-RKRVYVCPEKTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQ 146
QR++K+V RK+VYVCPE CVHHHPSRALGDLTGIKKHF RKHGEKKWKCEKCSK+YAVQ
Sbjct: 122 QRSNKDVVRKKVYVCPEPGCVHHHPSRALGDLTGIKKHFFRKHGEKKWKCEKCSKKYAVQ 181
Query: 147 SDWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFCDALAEETAKV 192
SDWKAH+KTCGT+EYKCDCGT+FSRRDSFITHRAFCDALAEE+A+
Sbjct: 182 SDWKAHAKTCGTKEYKCDCGTLFSRRDSFITHRAFCDALAEESARA 227
>AT3G13810.1 | Symbols: ATIDD11 | ATIDD11 (ARABIDOPSIS THALIANA
INDETERMINATE(ID)-DOMAIN 11); nucleic acid binding /
transcription factor/ zinc ion binding |
chr3:4544948-4547307 FORWARD
Length = 513
Score = 314 bits (805), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 144/164 (87%), Positives = 158/164 (96%), Gaps = 1/164 (0%)
Query: 29 KRKRNLPGNPDPEAEVIALSPKTLMATNRFVCEICLKGFQRDQNLQLHRRGHNLPWKLKQ 88
K++RN PGNPDPE+EVIALSPKTLMATNRFVCEIC KGFQRDQNLQLHRRGHNLPWKLKQ
Sbjct: 70 KKRRNQPGNPDPESEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQ 129
Query: 89 RTSKEV-RKRVYVCPEKTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQS 147
R++KEV RK+VYVCPE +CVHH PSRALGDLTGIKKHFCRKHGEKKWKC+KCSK+YAVQS
Sbjct: 130 RSNKEVIRKKVYVCPEASCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSKKYAVQS 189
Query: 148 DWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFCDALAEETAK 191
D KAHSKTCGT+EY+CDCGT+FSRRDSFITHRAFC+ALAEETA+
Sbjct: 190 DCKAHSKTCGTKEYRCDCGTLFSRRDSFITHRAFCEALAEETAR 233
>AT2G02080.1 | Symbols: ATIDD4 | ATIDD4 (ARABIDOPSIS THALIANA
INDETERMINATE(ID)-DOMAIN 4); transcription factor |
chr2:518327-521169 REVERSE
Length = 516
Score = 313 bits (803), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 134/163 (82%), Positives = 157/163 (96%)
Query: 29 KRKRNLPGNPDPEAEVIALSPKTLMATNRFVCEICLKGFQRDQNLQLHRRGHNLPWKLKQ 88
K++RN PGNP+P+AEV+ALSPKTLMATNRF+C++C KGFQR+QNLQLHRRGHNLPWKLKQ
Sbjct: 54 KKRRNQPGNPNPDAEVVALSPKTLMATNRFICDVCNKGFQREQNLQLHRRGHNLPWKLKQ 113
Query: 89 RTSKEVRKRVYVCPEKTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSD 148
+++KEV+++VY+CPE TCVHH PSRALGDLTGIKKH+ RKHGEKKWKCEKCSKRYAVQSD
Sbjct: 114 KSTKEVKRKVYLCPEPTCVHHDPSRALGDLTGIKKHYYRKHGEKKWKCEKCSKRYAVQSD 173
Query: 149 WKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFCDALAEETAK 191
WKAHSKTCGT+EY+CDCGT+FSRRDS+ITHRAFCDAL +ETA+
Sbjct: 174 WKAHSKTCGTKEYRCDCGTIFSRRDSYITHRAFCDALIQETAR 216
>AT4G02670.1 | Symbols: ATIDD12 | ATIDD12 (ARABIDOPSIS THALIANA
INDETERMINATE(ID)-DOMAIN 12); nucleic acid binding /
transcription factor/ zinc ion binding |
chr4:1176190-1178489 REVERSE
Length = 402
Score = 312 bits (799), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 140/168 (83%), Positives = 158/168 (94%), Gaps = 1/168 (0%)
Query: 29 KRKRNLPGNPDPEAEVIALSPKTLMATNRFVCEICLKGFQRDQNLQLHRRGHNLPWKLKQ 88
K+KR LPGNPDP+AEVIALSPKTL+ATNRFVCEIC KGFQRDQNLQLHRRGHNLPWKLKQ
Sbjct: 53 KKKRGLPGNPDPDAEVIALSPKTLLATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQ 112
Query: 89 RTSKEV-RKRVYVCPEKTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQS 147
+ +KE +K+VYVCPE C HHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSK YAVQS
Sbjct: 113 KNTKEQQKKKVYVCPETNCAHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKFYAVQS 172
Query: 148 DWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFCDALAEETAKVNAT 195
DWKAH+K CGTR+Y+CDCGT+FSR+D+FITHRAFCDALAEE+A++++T
Sbjct: 173 DWKAHTKICGTRDYRCDCGTLFSRKDTFITHRAFCDALAEESARLHST 220
>AT3G45260.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr3:16607835-16609535 REVERSE
Length = 446
Score = 310 bits (795), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 138/164 (84%), Positives = 156/164 (95%), Gaps = 1/164 (0%)
Query: 29 KRKRNLPGNPDPEAEVIALSPKTLMATNRFVCEICLKGFQRDQNLQLHRRGHNLPWKLKQ 88
KRKRNLPGNPDP+AEVIALSP +LM TNRF+CE+C KGF+RDQNLQLHRRGHNLPWKLKQ
Sbjct: 39 KRKRNLPGNPDPDAEVIALSPNSLMTTNRFICEVCNKGFKRDQNLQLHRRGHNLPWKLKQ 98
Query: 89 RTSKE-VRKRVYVCPEKTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQS 147
RT+KE V+K+VY+CPEKTCVHH P+RALGDLTGIKKHF RKHGEKKWKC+KCSK+YAV S
Sbjct: 99 RTNKEQVKKKVYICPEKTCVHHDPARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVMS 158
Query: 148 DWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFCDALAEETAK 191
DWKAHSK CGT+EY+CDCGT+FSR+DSFITHRAFCDALAEE+A+
Sbjct: 159 DWKAHSKICGTKEYRCDCGTLFSRKDSFITHRAFCDALAEESAR 202
>AT1G14580.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr1:4990065-4992437 FORWARD
Length = 467
Score = 307 bits (787), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 132/163 (80%), Positives = 157/163 (96%)
Query: 29 KRKRNLPGNPDPEAEVIALSPKTLMATNRFVCEICLKGFQRDQNLQLHRRGHNLPWKLKQ 88
K++RN PGNP+P+AEVIALSPKT+MATNRF+CE+C KGFQR+QNLQLHRRGHNLPWKLKQ
Sbjct: 53 KKRRNQPGNPNPDAEVIALSPKTIMATNRFLCEVCNKGFQREQNLQLHRRGHNLPWKLKQ 112
Query: 89 RTSKEVRKRVYVCPEKTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSD 148
+++KEVR++VY+CPE +CVHH P+RALGDLTGIKKH+ RKHGEKKWKC+KCSKRYAVQSD
Sbjct: 113 KSNKEVRRKVYLCPEPSCVHHDPARALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAVQSD 172
Query: 149 WKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFCDALAEETAK 191
WKAHSKTCGT+EY+CDCGT+FSRRDS+ITHRAFCDAL +E+A+
Sbjct: 173 WKAHSKTCGTKEYRCDCGTIFSRRDSYITHRAFCDALIQESAR 215
>AT5G03150.1 | Symbols: JKD | JKD (JACKDAW); nucleic acid binding /
protein binding / protein homodimerization/
transcription factor/ zinc ion binding |
chr5:745848-748677 FORWARD
Length = 503
Score = 306 bits (784), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 138/167 (82%), Positives = 155/167 (92%), Gaps = 1/167 (0%)
Query: 29 KRKRNLPGNPDPEAEVIALSPKTLMATNRFVCEICLKGFQRDQNLQLHRRGHNLPWKLKQ 88
K+KRN PG PDP+A+VIALSP TLMATNRFVCEIC KGFQRDQNLQLHRRGHNLPWKLKQ
Sbjct: 53 KKKRNQPGTPDPDADVIALSPTTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQ 112
Query: 89 RTSKEV-RKRVYVCPEKTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQS 147
R+ +EV +K+VY+CP KTCVHH SRALGDLTGIKKH+ RKHGEKKWKCEKCSK+YAVQS
Sbjct: 113 RSKQEVIKKKVYICPIKTCVHHDASRALGDLTGIKKHYSRKHGEKKWKCEKCSKKYAVQS 172
Query: 148 DWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFCDALAEETAKVNA 194
DWKAH+KTCGTREYKCDCGT+FSR+DSFITHRAFCDAL EE A++++
Sbjct: 173 DWKAHAKTCGTREYKCDCGTLFSRKDSFITHRAFCDALTEEGARMSS 219
>AT2G02070.1 | Symbols: ATIDD5 | ATIDD5 (ARABIDOPSIS THALIANA
INDETERMINATE(ID)-DOMAIN 5); nucleic acid binding /
transcription factor/ zinc ion binding |
chr2:505522-509153 FORWARD
Length = 602
Score = 306 bits (783), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 133/163 (81%), Positives = 155/163 (95%)
Query: 29 KRKRNLPGNPDPEAEVIALSPKTLMATNRFVCEICLKGFQRDQNLQLHRRGHNLPWKLKQ 88
K+KRN P P+ +AEVIALSPKTLMATNRF+CE+C KGFQR+QNLQLHRRGHNLPWKLKQ
Sbjct: 52 KKKRNQPRTPNSDAEVIALSPKTLMATNRFICEVCNKGFQREQNLQLHRRGHNLPWKLKQ 111
Query: 89 RTSKEVRKRVYVCPEKTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSD 148
+++KEV+++VY+CPE +CVHH PSRALGDLTGIKKH+ RKHGEKKWKC+KCSKRYAVQSD
Sbjct: 112 KSTKEVKRKVYLCPEPSCVHHDPSRALGDLTGIKKHYYRKHGEKKWKCDKCSKRYAVQSD 171
Query: 149 WKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFCDALAEETAK 191
WKAHSKTCGT+EY+CDCGT+FSRRDSFITHRAFCDALA+E+A+
Sbjct: 172 WKAHSKTCGTKEYRCDCGTLFSRRDSFITHRAFCDALAQESAR 214
>AT2G02080.2 | Symbols: ATIDD4 | ATIDD4 (ARABIDOPSIS THALIANA
INDETERMINATE(ID)-DOMAIN 4) | chr2:518327-520618 REVERSE
Length = 439
Score = 272 bits (695), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 116/139 (83%), Positives = 134/139 (96%)
Query: 53 MATNRFVCEICLKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRVYVCPEKTCVHHHPS 112
MATNRF+C++C KGFQR+QNLQLHRRGHNLPWKLKQ+++KEV+++VY+CPE TCVHH PS
Sbjct: 1 MATNRFICDVCNKGFQREQNLQLHRRGHNLPWKLKQKSTKEVKRKVYLCPEPTCVHHDPS 60
Query: 113 RALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTVFSRR 172
RALGDLTGIKKH+ RKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGT+EY+CDCGT+FSRR
Sbjct: 61 RALGDLTGIKKHYYRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTKEYRCDCGTIFSRR 120
Query: 173 DSFITHRAFCDALAEETAK 191
DS+ITHRAFCDAL +ETA+
Sbjct: 121 DSYITHRAFCDALIQETAR 139
>AT5G60470.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr5:24338196-24340016 FORWARD
Length = 392
Score = 255 bits (651), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 122/211 (57%), Positives = 152/211 (72%), Gaps = 7/211 (3%)
Query: 53 MATNRFVCEICLKGFQRDQNLQLHRRGHNLPWKLKQRTSK-EVRKRVYVCPEKTCVHHHP 111
MATNRF CEIC KGFQR+QNLQLH+RGHNLPWKLKQ+T+K +V+K+VY+CPEK+CVHH P
Sbjct: 1 MATNRFFCEICNKGFQREQNLQLHKRGHNLPWKLKQKTNKNQVKKKVYICPEKSCVHHDP 60
Query: 112 SRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTVFSR 171
+RALGDLTGIKKHF RKHGEKKWKC+KCSK+YAV SDWKAH+K CG+RE++CDCGT+FSR
Sbjct: 61 ARALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVISDWKAHNKICGSREFRCDCGTLFSR 120
Query: 172 RDSFITHRAFCDALAEETAKVNATXXXXXXXXXXMGYTFMQQTPLGPTMATHFSSIFKPI 231
+DSFI+HR+FCD LAEE++K + T P + S + +
Sbjct: 121 KDSFISHRSFCDVLAEESSKFFSVPSPLAANSTIATVTDTN----NPILIQ--SQLDQSS 174
Query: 232 SCTEEETGNNNHQTPRGLSLWMTQPQTSHPH 262
+ T + NNNH T G + P P+
Sbjct: 175 TGTADLNVNNNHTTLFGQKFTNSNPTQQQPN 205
>AT1G68130.1 | Symbols: ATIDD14 | ATIDD14 (ARABIDOPSIS THALIANA
INDETERMINATE(ID)-DOMAIN 14); nucleic acid binding /
transcription factor/ zinc ion binding |
chr1:25536147-25537980 FORWARD
Length = 419
Score = 229 bits (584), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 107/156 (68%), Positives = 128/156 (82%), Gaps = 2/156 (1%)
Query: 29 KRKRNLPGNPDPEAEVIALSPKTLMATNRFVCEICLKGFQRDQNLQLHRRGHNLPWK-LK 87
KRKR G PDPEAEV++LSP+TL+ ++R+VCEIC +GFQRDQNLQ+HRR H +PWK LK
Sbjct: 41 KRKRRPAGTPDPEAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLK 100
Query: 88 QRTSKEVRKRVYVCPEKTCVHHHPSRALGDLTGIKKHFCRKHGE-KKWKCEKCSKRYAVQ 146
+ T++EVRKRVYVCPE TC+HH+P ALGDL GIKKHF RKH K+W CE+CSK YAVQ
Sbjct: 101 RETNEEVRKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWICERCSKGYAVQ 160
Query: 147 SDWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFC 182
SD+KAH KTCGTR + CDCG VFSR +SFI H+ C
Sbjct: 161 SDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDTC 196
>AT2G01940.1 | Symbols: SGR5, ATIDD15 | ATIDD15/SGR5 (ARABIDOPSIS
THALIANA INDETERMINATE(ID)-DOMAIN 15, SHOOT GRAVITROPISM
5); nucleic acid binding / transcription factor/ zinc
ion binding | chr2:432651-434916 FORWARD
Length = 445
Score = 226 bits (576), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 104/158 (65%), Positives = 127/158 (80%), Gaps = 2/158 (1%)
Query: 29 KRKRNLPGNPDPEAEVIALSPKTLMATNRFVCEICLKGFQRDQNLQLHRRGHNLPWKLKQ 88
KRKR G PDP+AEV++LSP+TL+ ++R++CEIC +GFQRDQNLQ+HRR H +PWKL +
Sbjct: 44 KRKRRPAGTPDPDAEVVSLSPRTLLESDRYICEICNQGFQRDQNLQMHRRRHKVPWKLLK 103
Query: 89 RTSK-EVRKRVYVCPEKTCVHHHPSRALGDLTGIKKHFCRKHGE-KKWKCEKCSKRYAVQ 146
R + EV+KRVYVCPE TC+HH+P ALGDL GIKKHF RKH K+W CE+CSK YAVQ
Sbjct: 104 RDNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQ 163
Query: 147 SDWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFCDA 184
SD+KAH KTCGTR + CDCG VFSR +SFI H+ C A
Sbjct: 164 SDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDNCSA 201
>AT2G01940.3 | Symbols: SGR5, ATIDD15 | ATIDD15/SGR5 (ARABIDOPSIS
THALIANA INDETERMINATE(ID)-DOMAIN 15, SHOOT GRAVITROPISM
5) | chr2:432651-434916 FORWARD
Length = 446
Score = 216 bits (549), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 102/159 (64%), Positives = 125/159 (78%), Gaps = 3/159 (1%)
Query: 29 KRKRNLPGNPDPEAEVIALSPKTLMATNRFVCEICLKGFQRDQNLQLHRRGHNLPWKLKQ 88
KRKR G PDP+AEV++LSP+TL+ ++R++CEIC +GFQRDQNLQ+HRR H +PWKL +
Sbjct: 44 KRKRRPAGTPDPDAEVVSLSPRTLLESDRYICEICNQGFQRDQNLQMHRRRHKVPWKLLK 103
Query: 89 RTSK-EVRKRVYVCPEKTCVHHHPSRALGDLTGIKKHFCRKHGE-KKWKCEKCSKRYAVQ 146
R + EV+KRVYVCPE TC+HH+P ALGDL GIKKHF RKH K+W CE+CSK YAVQ
Sbjct: 104 RDNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQ 163
Query: 147 SDWKAHSKTCGTREYKCDCGTVFS-RRDSFITHRAFCDA 184
SD+KAH KTCGTR + CDCG S R +SFI H+ C A
Sbjct: 164 SDYKAHLKTCGTRGHSCDCGFFSSFRVESFIEHQDNCSA 202
>AT1G25250.1 | Symbols: ATIDD16 | ATIDD16 (ARABIDOPSIS THALIANA
INDETERMINATE(ID)-DOMAIN 16); nucleic acid binding /
transcription factor/ zinc ion binding |
chr1:8849536-8851507 FORWARD
Length = 362
Score = 213 bits (542), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 99/147 (67%), Positives = 119/147 (80%), Gaps = 3/147 (2%)
Query: 39 DPEAEVIALSPKTLMATNRFVCEICLKGFQRDQNLQLHRRGHNLPWKLKQRTSK--EVRK 96
DP+AEV++LSP+TL+ ++R+VCEIC +GFQRDQNLQ+HRR H +PWKL +R K EVRK
Sbjct: 20 DPDAEVVSLSPRTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRDKKDEEVRK 79
Query: 97 RVYVCPEKTCVHHHPSRALGDLTGIKKHFCRKHG-EKKWKCEKCSKRYAVQSDWKAHSKT 155
RVYVCPE TC+HH P ALGDL GIKKHF RKH K+W CE+CSK YAVQSD+KAH KT
Sbjct: 80 RVYVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSVHKQWVCERCSKGYAVQSDYKAHLKT 139
Query: 156 CGTREYKCDCGTVFSRRDSFITHRAFC 182
CG+R + CDCG VFSR +SFI H+ C
Sbjct: 140 CGSRGHSCDCGRVFSRVESFIEHQDTC 166
>AT1G68130.2 | Symbols: ATIDD14 | ATIDD14 (ARABIDOPSIS THALIANA
INDETERMINATE(ID)-DOMAIN 14) | chr1:25536506-25537980
FORWARD
Length = 333
Score = 157 bits (397), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 75/110 (68%), Positives = 88/110 (80%), Gaps = 2/110 (1%)
Query: 75 LHRRGHNLPWKL-KQRTSKEVRKRVYVCPEKTCVHHHPSRALGDLTGIKKHFCRKHGE-K 132
+HRR H +PWKL K+ T++EVRKRVYVCPE TC+HH+P ALGDL GIKKHF RKH K
Sbjct: 1 MHRRRHKVPWKLLKRETNEEVRKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHK 60
Query: 133 KWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFC 182
+W CE+CSK YAVQSD+KAH KTCGTR + CDCG VFSR +SFI H+ C
Sbjct: 61 QWICERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDTC 110
>AT2G01940.2 | Symbols: SGR5, ATIDD15 | ATIDD15/SGR5 (ARABIDOPSIS
THALIANA INDETERMINATE(ID)-DOMAIN 15, SHOOT GRAVITROPISM
5); nucleic acid binding / zinc ion binding |
chr2:433231-434916 FORWARD
Length = 356
Score = 156 bits (394), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 74/112 (66%), Positives = 87/112 (77%), Gaps = 2/112 (1%)
Query: 75 LHRRGHNLPWKLKQRTSK-EVRKRVYVCPEKTCVHHHPSRALGDLTGIKKHFCRKHGE-K 132
+HRR H +PWKL +R + EV+KRVYVCPE TC+HH+P ALGDL GIKKHF RKH K
Sbjct: 1 MHRRRHKVPWKLLKRDNNIEVKKRVYVCPEPTCLHHNPCHALGDLVGIKKHFRRKHSNHK 60
Query: 133 KWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFCDA 184
+W CE+CSK YAVQSD+KAH KTCGTR + CDCG VFSR +SFI H+ C A
Sbjct: 61 QWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDNCSA 112
>AT1G34370.1 | Symbols: STOP1 | STOP1 (SENSITIVE TO PROTON
RHIZOTOXICITY 1); nucleic acid binding / transcription
factor/ zinc ion binding | chr1:12550980-12552479
FORWARD
Length = 499
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 80/158 (50%), Gaps = 14/158 (8%)
Query: 38 PDPEAEVIALSPKTLMATNRFVCEICLKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKR 97
P E++ L + ++A + C IC KGF+RD NL++H RGH +K +K ++
Sbjct: 224 PPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKES 283
Query: 98 V----------YVCPEKTC---VHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKC-SKRY 143
V Y CP C H + L + +K H+ R H +K + C +C +K++
Sbjct: 284 VPGSEPMLIKRYSCPFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKF 343
Query: 144 AVQSDWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAF 181
+V +D K H K CG ++ C CGT FSR+D H A
Sbjct: 344 SVIADLKTHEKHCGKNKWLCSCGTTFSRKDKLFGHIAL 381
>AT1G34370.2 | Symbols: STOP1 | STOP1 (SENSITIVE TO PROTON
RHIZOTOXICITY 1); nucleic acid binding / transcription
factor/ zinc ion binding | chr1:12550980-12552479
FORWARD
Length = 499
Score = 94.4 bits (233), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 80/158 (50%), Gaps = 14/158 (8%)
Query: 38 PDPEAEVIALSPKTLMATNRFVCEICLKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKR 97
P E++ L + ++A + C IC KGF+RD NL++H RGH +K +K ++
Sbjct: 224 PPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKES 283
Query: 98 V----------YVCPEKTC---VHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKC-SKRY 143
V Y CP C H + L + +K H+ R H +K + C +C +K++
Sbjct: 284 VPGSEPMLIKRYSCPFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKF 343
Query: 144 AVQSDWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAF 181
+V +D K H K CG ++ C CGT FSR+D H A
Sbjct: 344 SVIADLKTHEKHCGKNKWLCSCGTTFSRKDKLFGHIAL 381
>AT1G34370.3 | Symbols: STOP1 | STOP1 (SENSITIVE TO PROTON
RHIZOTOXICITY 1); nucleic acid binding / zinc ion
binding | chr1:12551427-12552479 FORWARD
Length = 350
Score = 94.4 bits (233), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 80/158 (50%), Gaps = 14/158 (8%)
Query: 38 PDPEAEVIALSPKTLMATNRFVCEICLKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKR 97
P E++ L + ++A + C IC KGF+RD NL++H RGH +K +K ++
Sbjct: 75 PPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYKTAAALAKPNKES 134
Query: 98 V----------YVCPEKTC---VHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKC-SKRY 143
V Y CP C H + L + +K H+ R H +K + C +C +K++
Sbjct: 135 VPGSEPMLIKRYSCPFLGCKRNKEHKKFQPLKTILCVKNHYKRTHCDKSFTCSRCHTKKF 194
Query: 144 AVQSDWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAF 181
+V +D K H K CG ++ C CGT FSR+D H A
Sbjct: 195 SVIADLKTHEKHCGKNKWLCSCGTTFSRKDKLFGHIAL 232
>AT5G22890.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr5:7653544-7654665 REVERSE
Length = 373
Score = 90.9 bits (224), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 81/153 (52%), Gaps = 14/153 (9%)
Query: 43 EVIALSPKTLMATNRFVCEICLKGFQRDQNLQLHRRGHNLPWKLKQR----TSKE----- 93
+++ L L+A C+IC KGF+RD NL++H R H +K ++ TS++
Sbjct: 202 DILELDVADLLAKYTHYCQICGKGFKRDANLRMHMRAHGDEYKTREALISPTSQDKKGGY 261
Query: 94 -VRKRVYVCPEKTC---VHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCS-KRYAVQSD 148
++K Y CP+ C H + L + K H+ R H K + C +CS K ++V SD
Sbjct: 262 SLKKHYYSCPQHGCRWNQRHEKFQPLKSVICAKNHYKRSHCPKMYMCRRCSVKHFSVLSD 321
Query: 149 WKAHSKTCGTREYKCDCGTVFSRRDSFITHRAF 181
+ H K CG ++ C CGT FSR+D ++H +
Sbjct: 322 LRTHEKHCGDIKWVCSCGTKFSRKDKLMSHVSL 354
>AT1G13290.1 | Symbols: | zinc finger (C2H2 type) family protein |
chr1:4550363-4551524 REVERSE
Length = 302
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 78/152 (51%), Gaps = 12/152 (7%)
Query: 50 KTLMATNRFVCEICLKGFQRDQNLQLHRRGHNLPWKLK-------QRTSKEVRKRVYVCP 102
+ L+ +F C +C K F R N+Q+H GH ++ + +S +R Y C
Sbjct: 93 QILVGPTQFSCSVCNKTFNRFNNMQMHMWGHGSQYRKGPESLRGTKSSSSILRLPCYCCA 152
Query: 103 E--KTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKC-EKCSKRYAVQSDWKAHSKTCGTR 159
E K + H S+ L D ++ H+ RKHG K ++C +KC K +AV+ DW+ H K CG +
Sbjct: 153 EGCKNNIDHPRSKPLKDFRTLQTHYKRKHGAKPFRCRKKCEKTFAVRGDWRTHEKNCG-K 211
Query: 160 EYKCDCGTVFSRRDSFITH-RAFCDALAEETA 190
+ C CG+ F + S H RAF D A T
Sbjct: 212 LWFCVCGSDFKHKRSLKDHVRAFGDGHAAHTV 243
>AT1G34790.1 | Symbols: TT1 | TT1 (TRANSPARENT TESTA 1);
transcription factor | chr1:12763931-12765467 FORWARD
Length = 303
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 72/150 (48%), Gaps = 10/150 (6%)
Query: 41 EAEVIALSPKTLMATNRFVCEICLKGFQRDQNLQLHRRGHNLPWKLKQRTSKEVRKRV-- 98
+A I + L+ F C +C K F R NLQ+H GH ++ + K + R
Sbjct: 128 KAYWIPAPEQILIGFTHFSCHVCFKTFNRYNNLQMHMWGHGSQYRKGPESLKGTQPRAML 187
Query: 99 ----YVCPE--KTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAH 152
Y C E + + H S+ L D ++ H+ RKHG K + C C K AV+ DW+ H
Sbjct: 188 GIPCYCCVEGCRNHIDHPRSKPLKDFRTLQTHYKRKHGHKPFSCRLCGKLLAVKGDWRTH 247
Query: 153 SKTCGTREYKCDCGTVFSRRDSFITH-RAF 181
K CG R + C CG+ F + S H +AF
Sbjct: 248 EKNCGKR-WVCVCGSDFKHKRSLKDHVKAF 276
>AT3G20880.1 | Symbols: | zinc finger (C2H2 type) protein (WIP4) |
chr3:7313765-7315798 REVERSE
Length = 412
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 45 IALSPKTLMATNRFVCEICLKGFQRDQNLQLHRRGHNL-----PWKLKQRTSKEVRKRVY 99
I + LM +F C +C K F R N+Q+H GH P L+ + K
Sbjct: 243 IPTPSQILMGPTQFSCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTAMLKLPC 302
Query: 100 VCPEKTC---VHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTC 156
C C + H +R L D ++ H+ RKHG + + C +C K +AV+ DW+ H K C
Sbjct: 303 YCCAPGCKNNIDHPRARPLKDFRTLQTHYKRKHGVRPFACRRCGKAFAVKGDWRTHEKNC 362
Query: 157 GTREYKCDCGTVFSRRDSFITH-RAF 181
G Y C CG+ F + S H +AF
Sbjct: 363 GKLWY-CSCGSDFKHKRSLKDHVKAF 387
>AT1G08290.1 | Symbols: | zinc finger (C2H2 type) protein (WIP3) |
chr1:2610677-2613177 REVERSE
Length = 337
Score = 81.3 bits (199), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 68/135 (50%), Gaps = 11/135 (8%)
Query: 57 RFVCEICLKGFQRDQNLQLHRRGHNLPWKLKQRTSKE-------VRKRVYVCPE--KTCV 107
+F C IC K F R N+Q+H GH ++ + K +R Y C E K +
Sbjct: 179 QFACSICSKTFNRYNNMQMHMWGHGSEFRKGADSLKGTIQPAAILRLPCYCCAEGCKNNI 238
Query: 108 HHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTCGTREYKCDCGT 167
+H S+ L D ++ H+ RKHG K + C KC K AV+ DW+ H K CG Y C CG+
Sbjct: 239 NHPRSKPLKDFRTLQTHYKRKHGSKPFSCGKCGKALAVKGDWRTHEKNCGKLWY-CTCGS 297
Query: 168 VFSRRDSFITH-RAF 181
F + S H R+F
Sbjct: 298 DFKHKRSLKDHIRSF 312
>AT3G57670.1 | Symbols: NTT | NTT (NO TRANSMITTING TRACT); nucleic
acid binding / transcription factor/ zinc ion binding |
chr3:21381913-21384098 FORWARD
Length = 383
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 72/149 (48%), Gaps = 10/149 (6%)
Query: 45 IALSPKTLMATNRFVCEICLKGFQRDQNLQLHRRGHNLPWKLKQRT------SKEVRKRV 98
I + L+ +F C +C K F R N+Q+H GH ++ + + +R
Sbjct: 204 IPTPSQILIGPTQFSCPVCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPC 263
Query: 99 YVCPE--KTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTC 156
Y C + + H ++ L D ++ H+ RKHG K + C KC K +AV+ DW+ H K C
Sbjct: 264 YCCAPGCRNNIDHPRAKPLKDFRTLQTHYKRKHGIKPFMCRKCGKAFAVRGDWRTHEKNC 323
Query: 157 GTREYKCDCGTVFSRRDSFITH-RAFCDA 184
G Y C CG+ F + S H +AF +
Sbjct: 324 GKLWY-CICGSDFKHKRSLKDHIKAFGNG 351
>AT1G51220.1 | Symbols: | zinc finger (C2H2 type) protein (WIP5) |
chr1:18993593-18995702 REVERSE
Length = 337
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 70/146 (47%), Gaps = 10/146 (6%)
Query: 45 IALSPKTLMATNRFVCEICLKGFQRDQNLQLHRRGHNLPWKLKQRT------SKEVRKRV 98
I + L+ +F C +C K F R N+Q+H GH ++ + + +R
Sbjct: 165 IPTPSQILIGPTQFTCPLCFKTFNRYNNMQMHMWGHGSQYRKGPESLRGTQPTGMLRLPC 224
Query: 99 YVCPE--KTCVHHHPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKTC 156
+ C K + H ++ L D ++ H+ RKHG K + C C K +AV+ DW+ H K C
Sbjct: 225 FCCAPGCKNNIDHPRAKPLKDFRTLQTHYKRKHGSKPFACRMCGKAFAVKGDWRTHEKNC 284
Query: 157 GTREYKCDCGTVFSRRDSFITH-RAF 181
G Y C CG+ F + S H +AF
Sbjct: 285 GKLWY-CSCGSDFKHKRSLKDHVKAF 309