Miyakogusa Predicted Gene

chr3.CM0135.380.nd
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr3.CM0135.380.nd + phase: 1 /partial
         (1111 letters)

Database: TAIR8_pep 
           32,825 sequences; 13,166,001 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G23150.1 | Symbols: HUA2 | HUA2 (ENHANCER OF AG-4 2) | chr5:7...   414   e-115
AT5G08230.1 | Symbols:  | PWWP domain-containing protein | chr5:...   351   1e-96
AT3G63070.1 | Symbols:  | PWWP domain-containing protein | chr3:...   228   2e-59
AT2G48160.1 | Symbols:  | PWWP domain-containing protein | chr2:...   219   1e-56

>AT5G23150.1 | Symbols: HUA2 | HUA2 (ENHANCER OF AG-4 2) |
            chr5:7786176-7792083 FORWARD
          Length = 1392

 Score =  414 bits (1065), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 237/433 (54%), Positives = 291/433 (67%), Gaps = 16/433 (3%)

Query: 476  LHVDRLEVSMEEKSIMYAGSGTPESARTMRHLIAVAQAKRKQAHSQYLTLG--------I 527
            L    L+++ E+ S  +  + TP+SA +M+ LIA AQAKRK AH+Q    G        I
Sbjct: 635  LSAAMLDLNREKGSATFTSAKTPDSAASMKDLIAAAQAKRKLAHTQNSIFGNLNPSFLSI 694

Query: 528  HNFQGGTPSPSSVQPILSISNSFVQTDVQGVYEHTALASPPTNEHHSASRNLLDADEIEE 587
             + QG + SP  VQ   + +   +   VQG   H   +SP  + H S SRN ++ D+ EE
Sbjct: 695  SDTQGRSHSPFMVQNASASAAISMPLVVQG--HHQQGSSPSNHGHQSLSRNQIETDDNEE 752

Query: 588  RRVGSAQRGVGGSLSGGTEAAVARDAFEGMIETLSRTKESIGRATRLAIDCAKYGIANEV 647
            RR+ S  + VGGSLS  TEAA++RDAFEGM+ETLSRT+ESIGRATRLAIDCAKYG+A+EV
Sbjct: 753  RRLSSGHKSVGGSLSCSTEAAISRDAFEGMLETLSRTRESIGRATRLAIDCAKYGLASEV 812

Query: 648  VEVLIRKLENETSFHRKVDLFFLVDSITQCSHSHKGIAGASYIPTVQXXXXXXXXXXXXX 707
            VE+LIRKLE+E+ FHRKVDLFFLVDSITQ SHS KGIAGASY+PTVQ             
Sbjct: 813  VELLIRKLESESHFHRKVDLFFLVDSITQHSHSQKGIAGASYVPTVQAALPRLLGAAAPP 872

Query: 708  XXXXXENRRQCLKVLRLWLERKIFPESVIRRYMDDIGVSNDDMTVSLSLRRPSRAERSVD 767
                 +NRR+CLKVL+LWLERK+FPES++RRY+DDI  S DD T   SLRRPSR+ER+VD
Sbjct: 873  GTGASDNRRKCLKVLKLWLERKVFPESLLRRYIDDIRASGDDATGGFSLRRPSRSERAVD 932

Query: 768  DPIREMEGMLVDEYGSNATFQLPGFLSSHAFEDEDEDDLQINSCKDTQDASPADPTLTLG 827
            DPIREMEGMLVDEYGSNATFQLPGF SSH FED++EDD    S K+ +  S  +    L 
Sbjct: 933  DPIREMEGMLVDEYGSNATFQLPGFFSSHNFEDDEEDDDLPTSQKE-KSTSAGERVSALD 991

Query: 828  ESETSTVTPNDKRHCILEDVDGELEMEDVSGHPKDEKPVFLNSFDEIDVQVQRTDRNLDP 887
            + E    T +DK H +LEDVD ELEMEDVSG  KD  P   +SF E   + Q  D  ++P
Sbjct: 992  DLEIHD-TSSDKCHRVLEDVDHELEMEDVSGQRKDVAP---SSFCENKTKEQSLDV-MEP 1046

Query: 888  TSNNLEEILATPE 900
             +    E    PE
Sbjct: 1047 VAEKSTEFNPLPE 1059


>AT5G08230.1 | Symbols:  | PWWP domain-containing protein |
            chr5:2643847-2649789 REVERSE
          Length = 1445

 Score =  351 bits (901), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 207/403 (51%), Positives = 262/403 (65%), Gaps = 21/403 (5%)

Query: 476  LHVDRLEVSMEEKSI-MYAGSGTPESARTMRHLIAVAQAKRKQAHSQYL--------TLG 526
            L  D ++V+ E  +  +++   +  S+  M+ LIA AQAKRKQAHSQ+         +L 
Sbjct: 703  LSADVIDVNQENGNAPLFSFGMSDSSSSCMKDLIAAAQAKRKQAHSQFSPFVNLDHNSLN 762

Query: 527  IHNFQGGTPSPSSVQPILSISNSFVQTDVQGVYEHTALASPPTNEHHSASRNLLDADEIE 586
            I + Q  + SP  VQ   ++S+      +    EH  + +P  +   S+S N    +E E
Sbjct: 763  IDSMQT-SKSPFMVQ---NVSSPAADATLIVAQEHQEVLTPSNHGRQSSSSNQAGTEENE 818

Query: 587  ERRVGSAQRGVGGSLSGGTEAAVARDAFEGMIETLSRTKESIGRATRLAIDCAKYGIANE 646
            ERR  S  R VGGSLSG TEAA++RD FEGMIETLSRTKESI RATR+AIDCAKYGIANE
Sbjct: 819  ERRFSSGHRSVGGSLSGATEAAISRDTFEGMIETLSRTKESIRRATRVAIDCAKYGIANE 878

Query: 647  VVEVLIRKLENETSFHRKVDLFFLVDSITQCSHSHKGIAGASYIPTVQXXXXXXXXXXXX 706
            VVE+LIRKLE E  F RKVDLFFL+DSI Q SHS KG A + YIPTVQ            
Sbjct: 879  VVELLIRKLEIEPHFPRKVDLFFLLDSIIQSSHSQKGRARSLYIPTVQAALPRLLGAAAP 938

Query: 707  XXXXXXENRRQCLKVLRLWLERKIFPESVIRRYMDDIGVSNDDMTVSLSLRRPSRAERSV 766
                  ENR QC KVLRLWL+RKIFP+ ++RRY+ D+G S DD TV  SLRRPSR+ER+V
Sbjct: 939  PGTGARENRHQCRKVLRLWLKRKIFPDFLLRRYIGDLGASGDDKTVGFSLRRPSRSERAV 998

Query: 767  DDPIREMEGMLVDEYGSNATFQLPGFLSSHAFEDEDEDDLQI------NSCKDTQDASPA 820
            DDP+R+MEGMLVDEYGSNA FQLPG+L+S  F D++E+DL        N+  + +     
Sbjct: 999  DDPLRDMEGMLVDEYGSNANFQLPGYLASLTFGDDEEEDLPSTSQEVKNTHMEVKITHME 1058

Query: 821  DPTLTLGESETSTVTPNDKRHCILEDVDGELEMEDVSGHPKDE 863
            +P L LG+ E    + +DK HC++ DV+G LEMED S   KD+
Sbjct: 1059 EPVLALGKLEAHDSS-SDKPHCVV-DVNGGLEMEDASCQLKDD 1099


>AT3G63070.1 | Symbols:  | PWWP domain-containing protein |
            chr3:23313642-23320550 FORWARD
          Length = 1347

 Score =  228 bits (581), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 123/279 (44%), Positives = 174/279 (62%), Gaps = 8/279 (2%)

Query: 580  LDADEI-EERRVGSAQRGVGGSLSGGTEAAVARDAFEGMIETLSRTKESIGRATRLAIDC 638
            L+ D + EE +V +    V   +S   +  V  ++FE  +++L RTKE+IGRATRLA+D 
Sbjct: 820  LNVDTVKEESKVETGTTQVKKVVSSDVQCTV--ESFETALDSLVRTKETIGRATRLAMDL 877

Query: 639  AKYGIANEVVEVLIRKLENETSFHRKVDLFFLVDSITQCSHSHKGIAGASYIPTVQXXXX 698
            AK+G++ + +E+L   LE+E++  R+VDLFFLVDSI QCS    G AG  Y+ ++Q    
Sbjct: 878  AKFGVSAKAMEILAHTLESESNLQRRVDLFFLVDSIAQCSKGLNGDAGGVYLSSIQAMLP 937

Query: 699  XXXXXXXXXXXXXXENRRQCLKVLRLWLERKIFPESVIRRYMDDIGVSNDDMTVSLSLRR 758
                          ENR+QCLKVLRLWLER+I PES++R ++ ++  S  ++   L  RR
Sbjct: 938  RLLTAAVPAGATTQENRKQCLKVLRLWLERRILPESIVRHHIRELD-SLSNVPACLYSRR 996

Query: 759  PSRAERSVDDPIREMEGMLVDEYGSNATFQLPGFLSSHAFEDEDEDDLQINSCKDTQDAS 818
             +R ER++DDP+R+MEG+LVDEYGSN+T QL GF       DEDE     +   D +  +
Sbjct: 997  SARTERALDDPVRDMEGILVDEYGSNSTLQLHGFCIPPILRDEDEG--SDSDGGDFESVT 1054

Query: 819  PADPTLTLGESETSTVTPNDKRHCILEDVDGELEMEDVS 857
            P   + +L E  T ++T    R  ILEDVDGELEMEDV+
Sbjct: 1055 PEHESRSLEEHVTPSITERHTR--ILEDVDGELEMEDVA 1091


>AT2G48160.1 | Symbols:  | PWWP domain-containing protein |
            chr2:19696854-19703654 REVERSE
          Length = 1366

 Score =  219 bits (557), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 135/338 (39%), Positives = 188/338 (55%), Gaps = 29/338 (8%)

Query: 533  GTPSPSSVQPILSISNSFVQTDVQGVYEHTALASP--PTNEHHSASRNLLDADEIEERRV 590
            GTP  SSV     IS S    D+Q    + +  SP  PT E  +    ++  +E  E  V
Sbjct: 773  GTPHSSSV--YYHISTSESANDMQ----NNSSGSPNIPTGEKKNDCDAIVKEEEKIETGV 826

Query: 591  GSAQRGVGGSLSGGTEAAVARDAFEGMIETLSRTKESIGRATRLAIDCAKYGIANEVVEV 650
               Q+ V        +    R+++E  + +L RTKESIGRAT LA+D  K+G++ + +E+
Sbjct: 827  CQGQKVVS------CDVQSTRESYEDALCSLVRTKESIGRATCLAMDLMKFGVSAKAMEI 880

Query: 651  LIRKLENETSFHRKVDLFFLVDSITQCSHSHKGIAGASYIPTVQXXXXXXXXXXXXXXXX 710
            L   LE+E++  R+VDLFFLVDSI QCS   KG  G  Y+  +Q                
Sbjct: 881  LAHTLESESNLKRRVDLFFLVDSIAQCSKGLKGDTGCVYLSAIQVILPRLLAAAVPAGAT 940

Query: 711  XXENRRQCLKVLRLWLERKIFPESVIRRYMDDIGVSNDDMTVSLSLRRPSRAERSVDDPI 770
              ENR+QCLKVL+LWLER+I PES++R ++ ++  S+  +   L  RR +R ERS+DDP+
Sbjct: 941  TQENRKQCLKVLKLWLERRILPESIVRHHIRELD-SHSIVPACLYSRRSARTERSLDDPV 999

Query: 771  REMEGMLVDEYGSNATFQLPGFLSSHAFEDEDEDDLQINSCK----------DTQDASPA 820
            R+ME MLVDEYGSN+T QLPGF      +DE+        C           D +  +P 
Sbjct: 1000 RDMEDMLVDEYGSNSTLQLPGFCMPALLKDEEGGSDSEGGCDSEGGSDSDGGDFESVTPE 1059

Query: 821  DPTLTLGESETSTVTPNDKRH-CILEDVDGELEMEDVS 857
              +  L E+ +S+     +RH  ILEDVDGELEMEDV+
Sbjct: 1060 HESRILEENVSSSTA---ERHTLILEDVDGELEMEDVA 1094