Miyakogusa Predicted Gene
- chr3.CM0047.550.nd
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr3.CM0047.550.nd - phase: 0 /partial
(550 letters)
Database: TAIR8_pep
32,825 sequences; 13,166,001 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G26450.1 | Symbols: WIP1 | WIP1 (WPP-DOMAIN INTERACTING PROTE... 111 1e-24
AT5G56210.1 | Symbols: WIP2 | WIP2 (WPP-DOMAIN INTERACTING PROTE... 89 1e-17
AT3G13360.1 | Symbols: WIP3 | WIP3 (WPP-DOMAIN INTERACTING PROTE... 57 4e-08
>AT4G26450.1 | Symbols: WIP1 | WIP1 (WPP-DOMAIN INTERACTING PROTEIN
1); protein heterodimerization/ protein homodimerization
| chr4:13362564-13368686 FORWARD
Length = 1248
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 147/557 (26%), Positives = 233/557 (41%), Gaps = 138/557 (24%)
Query: 1 MDL-----GTESVEENELNHDGDENGTRDGDSI-----GDENLGLGFDGNSGVSTDQKEE 50
MDL ESV++N L N DG S+ DE++ L NS + +
Sbjct: 703 MDLESESSALESVDDNVLIQQSASNVCDDGRSLDNGSCSDESVKLLSTSNS---VELGKP 759
Query: 51 VVDEGSGDASSSKGTPTKGFGLKKWKRIRRDVVKDPNSSAESGKVLLKRGLSGSGNVNLS 110
+ + GD + KG GL+KW+RIRRD+VKD +++ E+ K LKRGLSG + +
Sbjct: 760 MSFDSPGDGGGAYSPVLKGQGLRKWRRIRRDLVKDTSANMENSKA-LKRGLSGVAHSHGK 818
Query: 111 ENQPFSRDVKEKNDGSSNTFGNVVFP-EGFAGRGSS-SDSRYAVGSGFVVGTXXXXXXXX 168
+ Q S +V++++ GS + + +GF GSS DSR+ G GF G
Sbjct: 819 QMQFQSPEVEQESQGSVGSVNMLKSSGDGFDILGSSGYDSRFVAGVGFSAGMDLEIDDDR 878
Query: 169 XXXXXTAASEPK-IRHDKSRSKNTNSKNVGNTAQRVLQQGKG---RIESSKNPGGGAGVR 224
T A PK IR++K ++ G+G R+E+SK G + V
Sbjct: 879 SSKSSTVARAPKVIRYEKP----------------MISSGQGGNIRVENSKKHRGES-VD 921
Query: 225 IEKXXXXXXXXXXXXXXXXXQGVFSVTSNGKHNGRPFIYDGGNGSEALINEHLTEGVEAS 284
EK + + K +GR Y+G NG ++ +
Sbjct: 922 FEKENSYSSLE---------------SDSRKQSGRMMDYNGENGETSMRKDDA-----GG 961
Query: 285 YGNENIGEDDDLLPENSVTNLSWGATEEKSVDNQSSNMEDPLIESIRSXXXXXXXXXXXX 344
G E+I + DN+ S+ DPL E+I
Sbjct: 962 EGGESI-----------------------NTDNRYSDEMDPLTEAINGFLALQDALEKEV 998
Query: 345 XKFKETGIEVVSPDDDLAKCSSASAGTIGVDIGLHNSCVSAHSGAEEIKQTASSSLELQV 404
+F+E G E + H+ VS ++S ++
Sbjct: 999 QQFQEIGNEPMPQ---------------------HHEQVS-----------EANSPHPEI 1026
Query: 405 LNLTQNISSLENKLKELQGMVALKDSRIVELETALSSGKSPKEESASTIGLXXXXXXXXX 464
+ L N+ LEN L+E + M+ +K+S I +LE+ ++ +S + I +
Sbjct: 1027 VTLVNNVEQLENMLEETRSMLEVKESHIRDLES--TTNQSKHSWGGTEIVVED------- 1077
Query: 465 XXXXGLFRQKIEAEIEYLAISKVMQNLKAGKDFQLTLLEEQEKLSENQE--------QVE 516
+FRQKIEAEIEYL S+ + NL + Q+ L++EQE L+E Q +V+
Sbjct: 1078 -----IFRQKIEAEIEYLIYSRSIDNLNS----QMKLIDEQESLAEEQTHETLNKLGRVQ 1128
Query: 517 IKASALKNKAEELEKYC 533
KA+ N+A++L+ C
Sbjct: 1129 TKAANFTNRAQDLQNDC 1145
>AT5G56210.1 | Symbols: WIP2 | WIP2 (WPP-DOMAIN INTERACTING PROTEIN
2); protein heterodimerization/ protein homodimerization
| chr5:22767886-22769589 REVERSE
Length = 509
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 134/490 (27%), Positives = 211/490 (43%), Gaps = 58/490 (11%)
Query: 67 TKGFGLKKWKRIRR-DVVKDPNSSAESGKVLLKRGLSGSGNVNLSENQPFSRDVKEKNDG 125
+KGFGL+KWKR R D+VKD S + LKR LSG + N + +V++ + G
Sbjct: 38 SKGFGLRKWKRRLRRDLVKDDTSVSMENSKALKRVLSGLVDPNAKQMHLPGPEVRQDSVG 97
Query: 126 SSNTFGNVVFPEGFAGRGSSSDSRYAVGSGFVVGTXXXXXXXXXXXXXTAASEPKIRHDK 185
S + +VV GF G S Y G F G + DK
Sbjct: 98 SVGSVNSVV---GFVMGGES----YGNGLAFAAGVDSDNSEDRSSTMSHSW-------DK 143
Query: 186 SRSKNTNSKNVGNTAQRVLQQGKGRIESSKNPGGGAGVRIEKXXXXXXXXXXXXXXXX-- 243
R K + K+V ++ QQ K +E S N G ++IEK
Sbjct: 144 HRGKVSGGKSVISSGDSS-QQRKSSVEKS-NKLRGERIKIEKENSHSSMESADSRSSNFV 201
Query: 244 -XQGV-FSVTSNGKHNGRPFIYDGGNGSEALINEHLTEGVEASYGNENIGEDDDLLPENS 301
QG +S++S + R YD N + VE D + E+
Sbjct: 202 FMQGASYSLSSREQGGRRMMDYDDENSDHDAHTSKRKDNVEEEEEETEDYSQGDCVEESQ 261
Query: 302 VTNLSWGATEEKSVDNQSSNMEDPLIESIRSXXXXXXXXXXXXXKFKETGIE--VVSPDD 359
+ + N SS+ DPLI ++ S KF+E G E + S D
Sbjct: 262 IKS------------NGSSDNLDPLIVAVNSFQTLQEALQKELQKFQELGKEEPITSLHD 309
Query: 360 DLAKCSSASAGTIGVDIGLHNSCVSAHSGAEEIKQTASSSLELQVLNLTQNISSLENKLK 419
S AG G + S G+E++ + +SL+ ++LNL N+ LE KL+
Sbjct: 310 GGESSSCIHAGHEGAS----EASSSYRFGSEKMGEMELTSLDSEILNLVNNVEHLEIKLE 365
Query: 420 ELQGMVALKDSRIVELETALSSGKSPKEESASTIGLXXXXXXXXXXXXXGLFRQKIEAEI 479
E + ++ +K+++I ELE STI + +F+QK+EAEI
Sbjct: 366 EAKRILEVKETQIRELE--------------STINVSETCNGGTEIGIEDIFQQKVEAEI 411
Query: 480 EYLAISKVMQNLKAGKDFQLTLLEEQEKLSENQ-EQVEIKASALKNKAEELEKYCGDSLV 538
EY+ S+ + NLK ++ L+EE++ L ++ ++ E KA LKN+A++L+ +C +
Sbjct: 412 EYIIFSRSVGNLKR----RIKLIEEEKTLGLSKLDKAETKAENLKNQAQDLQNHCVEITE 467
Query: 539 VEESFVLQKR 548
++E L+KR
Sbjct: 468 IQEVECLKKR 477
>AT3G13360.1 | Symbols: WIP3 | WIP3 (WPP-DOMAIN INTERACTING PROTEIN
3) | chr3:4338479-4339989 REVERSE
Length = 459
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 58/116 (50%), Gaps = 5/116 (4%)
Query: 42 GVSTDQKEEVVDEGSGDASSSKGTPTKGFGLKKWKRIRRD-VVKDPNSSAESGKVLLKRG 100
GV + Q+ V+ G S++ KGFGLKKW+RI+RD V+D + + G LLKRG
Sbjct: 33 GVGSPQRSNSVESPGGSVHSTR----KGFGLKKWRRIKRDGPVRDEAAPVDDGSKLLKRG 88
Query: 101 LSGSGNVNLSENQPFSRDVKEKNDGSSNTFGNVVFPEGFAGRGSSSDSRYAVGSGF 156
L+G N + S + ++ ++GS + V P G +AVG F
Sbjct: 89 LAGLVNPPSKHVEFSSVEARQSSEGSVGSVNMVHHPGVANGFSPDIGCMFAVGQAF 144