Miyakogusa Predicted Gene

chr2.LjT47G24.250.nd
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr2.LjT47G24.250.nd - phase: 0 
         (151 letters)

Database: TAIR8_pep 
           32,825 sequences; 13,166,001 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G26618.1 | Symbols: ERF1-3 | ERF1-3 (EUKARYOTIC RELEASE FACTO...   261   1e-70
AT1G12920.1 | Symbols: ERF1-2 | ERF1-2 (EUKARYOTIC RELEASE FACTO...   255   6e-69
AT5G47880.2 | Symbols: ERF1, ERF1-1 | ERF1-1 (EUKARYOTIC RELEASE...   233   3e-62
AT5G47880.1 | Symbols: ERF1, ERF1-1 | ERF1-1 (EUKARYOTIC RELEASE...   233   3e-62

>AT3G26618.1 | Symbols: ERF1-3 | ERF1-3 (EUKARYOTIC RELEASE FACTOR
           1-3); translation release factor | chr3:9790091-9791398
           FORWARD
          Length = 435

 Score =  261 bits (667), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 124/151 (82%), Positives = 138/151 (91%), Gaps = 1/151 (0%)

Query: 1   MIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLIVWENLDMNRYVLKNNVTGEIVIKH 60
           +IGKYFEEISQDTGKYVFGV+DTLKALEMGAVETLIVWENLD+NRY LKNN TGEIVIKH
Sbjct: 286 LIGKYFEEISQDTGKYVFGVEDTLKALEMGAVETLIVWENLDINRYELKNNTTGEIVIKH 345

Query: 61  YNKAEDADQSNFRDPESSADYEVQEKLSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRG 120
             K ++ +QSNF D E++A+ EVQEK+ LLEWFANEY+RFGCTLEFVTNKSQEGSQFCRG
Sbjct: 346 LGKDQENNQSNFHDAETNAELEVQEKMPLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRG 405

Query: 121 FGGIGGILRYQLDMRSFDEFSDDGGVYEDSE 151
           FGGIGG+LRYQLDMR+FDE S DG VYEDS+
Sbjct: 406 FGGIGGLLRYQLDMRTFDELS-DGEVYEDSD 435


>AT1G12920.1 | Symbols: ERF1-2 | ERF1-2 (EUKARYOTIC RELEASE FACTOR
           1-2); translation release factor | chr1:4396553-4397857
           REVERSE
          Length = 434

 Score =  255 bits (652), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 119/151 (78%), Positives = 138/151 (91%), Gaps = 1/151 (0%)

Query: 1   MIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLIVWENLDMNRYVLKNNVTGEIVIKH 60
           +IGKYFEEISQDTGKYVFGV+DTLKALEMGA+ETLIVWENLD+NRY LKN+ TGE+V+KH
Sbjct: 285 LIGKYFEEISQDTGKYVFGVEDTLKALEMGAIETLIVWENLDINRYELKNSTTGEMVVKH 344

Query: 61  YNKAEDADQSNFRDPESSADYEVQEKLSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRG 120
           + K +++D SNF D E++A+ EVQEK+ LLEWFANEY+RFGCTLEFVTNKSQEGSQFCRG
Sbjct: 345 FGKDQESDTSNFHDSETNAELEVQEKMPLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRG 404

Query: 121 FGGIGGILRYQLDMRSFDEFSDDGGVYEDSE 151
           FGGIGG+LRYQLDMR+FDE SD   VYEDS+
Sbjct: 405 FGGIGGMLRYQLDMRTFDELSDT-EVYEDSD 434


>AT5G47880.2 | Symbols: ERF1, ERF1-1 | ERF1-1 (EUKARYOTIC RELEASE
           FACTOR 1-1); translation release factor |
           chr5:19403781-19405091 REVERSE
          Length = 436

 Score =  233 bits (594), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 111/149 (74%), Positives = 127/149 (85%), Gaps = 2/149 (1%)

Query: 1   MIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLIVWENLDMNRYVLKNNVTGEIVIKH 60
           +IGKYFEEISQDTGKYVFGV+DTL ALE GA+ETLIVWENLD+NRYV+KN+ TGE VIKH
Sbjct: 287 LIGKYFEEISQDTGKYVFGVEDTLNALESGAIETLIVWENLDINRYVMKNSATGETVIKH 346

Query: 61  YNKAEDADQSNFRDPESSADYEVQEKLSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRG 120
            NK ++A+  NF+  +S    +V+EKLSLLEW ANEYRRFGC LEFVTNKSQEGSQFCRG
Sbjct: 347 LNKEQEANTENFKVADSDLALDVEEKLSLLEWLANEYRRFGCALEFVTNKSQEGSQFCRG 406

Query: 121 FGGIGGILRYQLDMRSFDEFSDDGGVYED 149
           FGGIGGILRYQLDM +FD  S+DG   +D
Sbjct: 407 FGGIGGILRYQLDMTAFD--SEDGEALDD 433


>AT5G47880.1 | Symbols: ERF1, ERF1-1 | ERF1-1 (EUKARYOTIC RELEASE
           FACTOR 1-1); translation release factor |
           chr5:19403781-19405091 REVERSE
          Length = 436

 Score =  233 bits (594), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 111/149 (74%), Positives = 127/149 (85%), Gaps = 2/149 (1%)

Query: 1   MIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLIVWENLDMNRYVLKNNVTGEIVIKH 60
           +IGKYFEEISQDTGKYVFGV+DTL ALE GA+ETLIVWENLD+NRYV+KN+ TGE VIKH
Sbjct: 287 LIGKYFEEISQDTGKYVFGVEDTLNALESGAIETLIVWENLDINRYVMKNSATGETVIKH 346

Query: 61  YNKAEDADQSNFRDPESSADYEVQEKLSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRG 120
            NK ++A+  NF+  +S    +V+EKLSLLEW ANEYRRFGC LEFVTNKSQEGSQFCRG
Sbjct: 347 LNKEQEANTENFKVADSDLALDVEEKLSLLEWLANEYRRFGCALEFVTNKSQEGSQFCRG 406

Query: 121 FGGIGGILRYQLDMRSFDEFSDDGGVYED 149
           FGGIGGILRYQLDM +FD  S+DG   +D
Sbjct: 407 FGGIGGILRYQLDMTAFD--SEDGEALDD 433