Miyakogusa Predicted Gene

chr2.LjT30P12.40.nc
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr2.LjT30P12.40.nc - phase: 0 
         (195 letters)

Database: TAIR8_pep 
           32,825 sequences; 13,166,001 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G27660.1 | Symbols: OLEO4 | OLEO4 (OLEOSIN4) | chr3:10245088-...   145   1e-35
AT5G40420.1 | Symbols: PA23, OLEO2 | OLEO2 (OLEOSIN 2) | chr5:16...   144   3e-35
AT3G01570.1 | Symbols:  | glycine-rich protein / oleosin | chr3:...   134   3e-32
AT2G25890.1 | Symbols:  | glycine-rich protein / oleosin | chr2:...    69   2e-12
AT4G25140.1 | Symbols: OLEO1 | OLEO1 (OLEOSIN1) | chr4:12900508-...    67   5e-12
AT5G51210.1 | Symbols: OLEO3 | OLEO3 (OLEOSIN3) | chr5:20837397-...    64   8e-11
AT5G61610.1 | Symbols:  | glycine-rich protein / oleosin | chr5:...    46   1e-05
AT5G07550.1 | Symbols: ATGRP19, GRP19 | GRP19 (Glycine rich prot...    42   2e-04
AT5G07550.2 | Symbols: ATGRP19, GRP19 | GRP19 (Glycine rich prot...    42   2e-04
AT3G18570.1 | Symbols:  | glycine-rich protein / oleosin | chr3:...    41   4e-04

>AT3G27660.1 | Symbols: OLEO4 | OLEO4 (OLEOSIN4) |
           chr3:10245088-10246058 FORWARD
          Length = 191

 Score =  145 bits (367), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 75/141 (53%), Positives = 87/141 (61%)

Query: 52  SLFPERGPSASQIIAVAAGVPXXXXXXXXXXXXXXXXXXXXXVFTPLLILFSPVIVPAVM 111
           S +  RGPS +QI+A+ AGVP                     V  PL +LFSPVIVPA +
Sbjct: 40  SDYKSRGPSTNQILALIAGVPIGGTLLTLAGLTLAGSVIGLLVSIPLFLLFSPVIVPAAL 99

Query: 112 TIGLAVAGILTSGAFGLTGLMSFSWLMNYIRETRGIVPEQLDYAKNRMADMADYVGQKTK 171
           TIGLAV GIL SG FGLTGL S SW++NY+R T   VPEQLDYAK RMAD   Y G K K
Sbjct: 100 TIGLAVTGILASGLFGLTGLSSVSWVLNYLRGTSDTVPEQLDYAKRRMADAVGYAGMKGK 159

Query: 172 EVGHDIQTKAHEAKRTPITTH 192
           E+G  +Q KAHEA+ T   T 
Sbjct: 160 EMGQYVQDKAHEARETEFMTE 180


>AT5G40420.1 | Symbols: PA23, OLEO2 | OLEO2 (OLEOSIN 2) |
           chr5:16190850-16191968 REVERSE
          Length = 199

 Score =  144 bits (364), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 73/144 (50%), Positives = 91/144 (63%), Gaps = 1/144 (0%)

Query: 52  SLFPERGPSASQIIAVAAGVPXXXXXXXXXXXXXXXXXXXXXVFTPLLILFSPVIVPAVM 111
           S+ PE GPS++Q++++  GVP                     V  PL +LFSPVIVPA +
Sbjct: 42  SMMPESGPSSTQVLSLLIGVPVVGSLLALAGLLLAGSVIGLMVALPLFLLFSPVIVPAAL 101

Query: 112 TIGLAVAGILTSGAFGLTGLMSFSWLMNYIRETRGIVPEQLDYAKNRMADMADYVGQKTK 171
           TIGLA+ G L SG FGLTGL S SW+MNY+R TR  VPEQL+YAK RMAD   Y GQK K
Sbjct: 102 TIGLAMTGFLASGMFGLTGLSSISWVMNYLRGTRRTVPEQLEYAKRRMADAVGYAGQKGK 161

Query: 172 EVGHDIQTKAHEAKRTPITT-HDT 194
           E+G  +Q KA + K+  I+  HDT
Sbjct: 162 EMGQHVQNKAQDVKQYDISKPHDT 185


>AT3G01570.1 | Symbols:  | glycine-rich protein / oleosin |
           chr3:222159-222785 REVERSE
          Length = 183

 Score =  134 bits (338), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 74/172 (43%), Positives = 96/172 (55%), Gaps = 19/172 (11%)

Query: 26  PQRYEAGGINFNNQPQRYXXXXXXFSSLFPERGPSASQIIAVAAGVPXXXXXXXXXXXXX 85
           PQR   GGI                  L+P+ GPS++Q++AV  GVP             
Sbjct: 15  PQRQHEGGIKV----------------LYPQSGPSSTQVLAVFVGVPIGGTLLTIAGLTL 58

Query: 86  XXXXXXXXVFTPLLILFSPVIVPAVMTIGLAVAGILTSGAFGLTGLMSFSWLMNYIRETR 145
                   +  PL ++FSPVIVPA   IGLA+ G L SGA GLTGL S SW++NYIR   
Sbjct: 59  AGSVIGLMLAFPLFLIFSPVIVPAAFVIGLAMTGFLASGAIGLTGLSSMSWVLNYIRRAG 118

Query: 146 GIVPEQLDYAKNRMADMADYVGQKTKEVGHDIQTKAH---EAKRTPITTHDT 194
             +PE+L+ AK+R+ADMA+YVGQ+TK+ G  I+ KAH   EAK   +   DT
Sbjct: 119 QHIPEELEEAKHRLADMAEYVGQRTKDAGQTIEDKAHDVREAKTFDVRDRDT 170


>AT2G25890.1 | Symbols:  | glycine-rich protein / oleosin |
           chr2:11044513-11044962 FORWARD
          Length = 149

 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 51/82 (62%), Gaps = 7/82 (8%)

Query: 94  VFTPLLILFSPVIVPAVMTIGLAVAGILTSGAFGLTGLMSFSWLMNYIRETRGIVPEQLD 153
           V TPL++LFSPV+VPAV+TIGL   G L SG  G+    + +W+  Y+     +  +++D
Sbjct: 58  VATPLMVLFSPVLVPAVITIGLLTMGFLFSGGCGVAAATALTWIYKYVTGKHPMGADKVD 117

Query: 154 YAKNRMADMADYVGQKTKEVGH 175
           YA+ R+A       +K KE+GH
Sbjct: 118 YARMRIA-------EKAKELGH 132


>AT4G25140.1 | Symbols: OLEO1 | OLEO1 (OLEOSIN1) |
           chr4:12900508-12901269 FORWARD
          Length = 173

 Score = 67.4 bits (163), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 33/101 (32%), Positives = 54/101 (53%)

Query: 94  VFTPLLILFSPVIVPAVMTIGLAVAGILTSGAFGLTGLMSFSWLMNYIRETRGIVPEQLD 153
           V TPLL++FSP++VPA++T+ L + G L+SG FG+  +  FSW+  Y         ++LD
Sbjct: 73  VATPLLVIFSPILVPALITVALLITGFLSSGGFGIAAITVFSWIYKYATGEHPQGSDKLD 132

Query: 154 YAKNRMADMADYVGQKTKEVGHDIQTKAHEAKRTPITTHDT 194
            A+ ++   A  +  + +  G       H+  RT    H T
Sbjct: 133 SARMKLGSKAQDLKDRAQYYGQQHTGGEHDRDRTRGGQHTT 173


>AT5G51210.1 | Symbols: OLEO3 | OLEO3 (OLEOSIN3) |
           chr5:20837397-20837932 FORWARD
          Length = 141

 Score = 63.5 bits (153), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 7/122 (5%)

Query: 56  ERGPSASQIIAVAAGVPXXXXXXXXXXXXXXXXXXXXXVFTPLLILFSPVIVPAVMTIGL 115
           E  P A Q++  A  V                      V TPLL++FSPV+VPAV+T+ L
Sbjct: 19  EAHPKARQMVKAATAVTAGGSLLVLSGLTLAGTVIALTVATPLLVIFSPVLVPAVVTVAL 78

Query: 116 AVAGILTSGAFGLTGLMSFSWLMNYIRETRGIVPEQLDYAKNRMADMADYVGQKTKEVGH 175
            + G L SG FG+  + +FSWL    R   G   ++++ A+ ++        Q TK   H
Sbjct: 79  IITGFLASGGFGIAAITAFSWLY---RHMTGSGSDKIENARMKVGSRV----QDTKYGQH 131

Query: 176 DI 177
           +I
Sbjct: 132 NI 133


>AT5G61610.1 | Symbols:  | glycine-rich protein / oleosin |
           chr5:24787325-24788139 FORWARD
          Length = 225

 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 5/83 (6%)

Query: 94  VFTPLLILFSPVIVPAVMTIGLAVAGILTSGAFGLTGLMSFSWLMNYIRETRGIVPEQLD 153
           V  P+L++ SP++VPAV+T      G L SG+ G  G+    WL      +R  +     
Sbjct: 38  VMIPVLVVLSPILVPAVITSSFLATGFLASGSLGALGIALLIWLYKKEEYSRATL----- 92

Query: 154 YAKNRMADMADYVGQKTKEVGHD 176
           +A+    D  + + +  K+ G D
Sbjct: 93  HARGGRPDGPNKLAESGKQSGGD 115


>AT5G07550.1 | Symbols: ATGRP19, GRP19 | GRP19 (Glycine rich protein
           19) | chr5:2388575-2389185 REVERSE
          Length = 106

 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 26/42 (61%)

Query: 96  TPLLILFSPVIVPAVMTIGLAVAGILTSGAFGLTGLMSFSWL 137
           TPL ++FSPV+VPA +   L  +G   SG+FG T     SWL
Sbjct: 36  TPLFVIFSPVLVPATIATTLLASGFTASGSFGATAFTILSWL 77


>AT5G07550.2 | Symbols: ATGRP19, GRP19 | GRP19 (Glycine rich protein
           19) | chr5:2388597-2389185 REVERSE
          Length = 95

 Score = 42.4 bits (98), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/42 (47%), Positives = 26/42 (61%)

Query: 96  TPLLILFSPVIVPAVMTIGLAVAGILTSGAFGLTGLMSFSWL 137
           TPL ++FSPV+VPA +   L  +G   SG+FG T     SWL
Sbjct: 36  TPLFVIFSPVLVPATIATTLLASGFTASGSFGATAFTILSWL 77


>AT3G18570.1 | Symbols:  | glycine-rich protein / oleosin |
           chr3:6396078-6396578 REVERSE
          Length = 166

 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 21/70 (30%), Positives = 33/70 (47%)

Query: 115 LAVAGILTSGAFGLTGLMSFSWLMNYIRETRGIVPEQLDYAKNRMADMADYVGQKTKEVG 174
           + V G LT   F +  +   SW   Y R    +   Q+DYA++R+ D A +V    +E G
Sbjct: 93  VVVGGFLTVSGFLVGTVALVSWTYRYFRGMHPVGSNQMDYARSRIYDTASHVKDYAREYG 152

Query: 175 HDIQTKAHEA 184
                +A +A
Sbjct: 153 GYFHGRAKDA 162