Miyakogusa Predicted Gene
- chr2.CM0304.1000.nc
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr2.CM0304.1000.nc + phase: 0
(605 letters)
Database: TAIR8_pep
32,825 sequences; 13,166,001 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G11560.1 | Symbols: | bromo-adjacent homology (BAH) domain-c... 578 e-165
AT4G23120.1 | Symbols: | bromo-adjacent homology (BAH) domain-c... 216 3e-56
AT2G25120.1 | Symbols: | bromo-adjacent homology (BAH) domain-c... 211 1e-54
AT3G43990.1 | Symbols: | bromo-adjacent homology (BAH) domain-c... 195 6e-50
AT3G48050.2 | Symbols: | bromo-adjacent homology (BAH) domain-c... 107 3e-23
AT3G48050.1 | Symbols: | bromo-adjacent homology (BAH) domain-c... 107 3e-23
AT3G48060.1 | Symbols: | bromo-adjacent homology (BAH) domain-c... 106 4e-23
AT1G68580.2 | Symbols: | agenet domain-containing protein / bro... 60 3e-09
AT4G22140.2 | Symbols: | DNA binding | chr4:11728105-11730242 R... 60 3e-09
AT4G22140.1 | Symbols: | DNA binding | chr4:11728568-11730242 R... 59 9e-09
AT1G68580.1 | Symbols: | agenet domain-containing protein / bro... 58 1e-08
AT4G04260.1 | Symbols: | bromo-adjacent homology (BAH) domain-c... 50 6e-06
AT5G25520.2 | Symbols: | transcription elongation factor-relate... 46 8e-05
AT5G25520.1 | Symbols: | transcription elongation factor-relate... 45 1e-04
AT5G11430.1 | Symbols: | transcription elongation factor-relate... 42 0.001
>AT4G11560.1 | Symbols: | bromo-adjacent homology (BAH)
domain-containing protein | chr4:7000089-7003439 REVERSE
Length = 587
Score = 578 bits (1491), Expect = e-165, Method: Compositional matrix adjust.
Identities = 289/500 (57%), Positives = 359/500 (71%), Gaps = 25/500 (5%)
Query: 80 PEDAKPIGDPVRFSGKGRGRKKHFNSFEFDGSQYTLEDPVLLVPEDKEQKPYVAIIKDIT 139
P+DA P+GD V +GKG+G++ HFN F +DG+ Y LE PVLLVPEDK QKPYVAIIKDIT
Sbjct: 98 PDDACPVGDSVNVTGKGKGKRTHFNQFAYDGNTYDLEVPVLLVPEDKSQKPYVAIIKDIT 157
Query: 140 QPYNGNIMVTGQWFYRPEEAEKKGGGSWISRDTRELFYSFHTDDIPAESVMHKCVVHFIP 199
Q +G++M+ GQWFYRPEEAEK+GGG+W S DTRELFYSFH D++PAESVMH+CVV+F+P
Sbjct: 158 QTKDGSMMILGQWFYRPEEAEKRGGGNWQSSDTRELFYSFHRDEVPAESVMHRCVVYFVP 217
Query: 200 LHKQLPKRKEHPGFVVQKVYDTVERKLWMLTDKDYEDIKQQEIDELVKKTVERIGEPLDV 259
HKQLPKRK +PGF+V+KVYDTVE+KLW LTDKDYED KQ+EID LVKKT+ +G+ D+
Sbjct: 218 AHKQLPKRKNNPGFIVRKVYDTVEKKLWKLTDKDYEDSKQREIDVLVKKTMNVLGDLPDL 277
Query: 260 EPEDAPDDQEDLVKNKRSLRRKSVSPPDVSKEEEGVPKSDQHPKPETPGSCINNASEHYR 319
E ED DQE+++K KRS R+ ++SP DV +EE D K ETPGS +SEHY
Sbjct: 278 ESEDMLVDQENVLKAKRSFRKVNISPVDVRREE------DASLKAETPGSGAGISSEHYA 331
Query: 320 ILVSFNALTGDVQRDKWLERSLQHLQYMCSSDDSTER-DNKGSNVNCDEIKHQNSNTSSE 378
IL F++LTGD RDK L + L+ +Q++C ++ + D + ++ +T E
Sbjct: 332 ILEKFDSLTGDAHRDKCLGKLLEAVQHICYIPENKQAGDEAKVGSDASHLEQDEKDTKPE 391
Query: 379 IANDCQDKGQKSSKPFKWPDAAVSAIVALEKASHDAFSSDFQKYNQKLRQLTFNLKNNAF 438
D + F WPDAAV + ALE ASH + +SDFQKYNQK+R L FNLKN A
Sbjct: 392 NGKD---------EKFLWPDAAVPQVCALENASHASLASDFQKYNQKMRTLVFNLKNTAL 442
Query: 439 LARRLLNGELEPSKILNMTYSELKEGLTAEEKTKKEPDESEHMQMTDARCSRCMEFKVGL 498
LARRLLNGELEP+ ILNM+ +ELKEGLTA+E TKKEPD+++ MQMT RCSRC + VGL
Sbjct: 443 LARRLLNGELEPATILNMSPTELKEGLTADETTKKEPDDADRMQMTSVRCSRCSQLTVGL 502
Query: 499 RDIIHAGHNDRYQLECVSCGNSWYASRDEVSSLTIDGSDSKKSIGTAPWATAKFEVIQKK 558
RDII AGH DRYQLECV CG SWYASRDEVS+LTI + P + E I+K
Sbjct: 503 RDIIQAGHGDRYQLECVDCGYSWYASRDEVSTLTI--------VTDKPAQGTEKEDIEKN 554
Query: 559 LLSPRESENSANDISGKTNE 578
L SPRE+ N D + KTN+
Sbjct: 555 LTSPRET-NKPKDEALKTND 573
>AT4G23120.1 | Symbols: | bromo-adjacent homology (BAH)
domain-containing protein | chr4:12113319-12115534
FORWARD
Length = 360
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 138/357 (38%), Positives = 195/357 (54%), Gaps = 60/357 (16%)
Query: 80 PED-AKPIGDPVRFSGKGRGRKKHFNSFEFDGSQYTLEDPVLLVPEDKEQKPYVAIIKDI 138
PED A+ IG + +GKG +K H+ +F+F ++Y LED VLLVPED E KPYVAIIKDI
Sbjct: 25 PEDYAQAIGLSHKCTGKGEKKKCHYKTFQFHANKYGLEDSVLLVPEDGE-KPYVAIIKDI 83
Query: 139 -TQPYNGNIMVTGQWFYRPEEAEKKGGGSWISRDTRELFYSFHTDDIPAESVMHKCVVHF 197
TQ G++ + QW YRPEE EKK G+W S+ +R+LFYSFH D++ AESV C+VHF
Sbjct: 84 YTQRKEGHVKLEVQWLYRPEEVEKKYVGNWKSKGSRDLFYSFHRDEVFAESVKDDCIVHF 143
Query: 198 IPLHKQLPKRKEHPGFVVQKVYDTVERKLWMLTDKDYEDIKQQEIDELVKKTVERIGEPL 257
+ +KQ+P R++HPGF+VQ VYD V++KL LT ++ +++EID V+KT+ RIG
Sbjct: 144 VQENKQIPNRRKHPGFIVQHVYDNVKKKLRKLTFNGFDLQQKREIDHFVEKTILRIGHL- 202
Query: 258 DVEPEDAPDDQEDLVKNKRSLRRKSVSPPDVSKEEEGVPKSDQHPKPETPGSCINNASEH 317
D+VK +++L +S+ + VP+S ET N +
Sbjct: 203 -----------RDIVKEQKTL---------ISRSKRTVPQSYIIKAVETSRESNNVVNS- 241
Query: 318 YRILVSFNALTGDVQRDKWLERSLQHLQYMCSSDDSTERDNKGSNVNCDEIKHQNSNTSS 377
IL SF+ LTGD RDK LE L+ ++ C T R + + +
Sbjct: 242 --ILESFDLLTGDSDRDKSLEELLEVVKPKC----RTSRKKQAGDYDSF----------- 284
Query: 378 EIANDCQDKGQKSSKPFKWPDAAVSAIVALEKASHDAFSSDFQKYNQKLRQLTFNLK 434
WP+ VS + ALE+A +D+ D KY+ K+ L LK
Sbjct: 285 ------------------WPNDVVSVVSALEQALYDSLKDDIAKYSNKVEILVGKLK 323
>AT2G25120.1 | Symbols: | bromo-adjacent homology (BAH)
domain-containing protein | chr2:10697013-10698648
FORWARD
Length = 380
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 138/361 (38%), Positives = 193/361 (53%), Gaps = 75/361 (20%)
Query: 80 PED-AKPIGDPVRFSGKGRGRKKHFNSFEFDGSQYTLEDPVLLVPEDKEQKPYVAIIKDI 138
PED AKP+G+ + +GKG+ +K HF +F F G+QY LED V LVP+D KPY AIIKDI
Sbjct: 62 PEDCAKPLGEVSKVTGKGKKKKSHFKTFTFRGNQYALEDSVQLVPDDPNSKPYCAIIKDI 121
Query: 139 TQPYNGN-IMVTGQWFYRPEEAEKKGGGSWISRDTRELFYSFHTDDIPAESVMHKCVVHF 197
P + + WFYRPE+ +KK G W S+D+R LFYSFH D++ AESV HKCVV+F
Sbjct: 122 YIPNKEKYVKLAVHWFYRPEDVDKKHVGKWESKDSRNLFYSFHRDEVFAESVKHKCVVNF 181
Query: 198 IPLHKQLPKRKEHPGFVVQKVYDTVERKLWMLTDKDYEDIKQQEIDELVKKTVERIGEPL 257
+P +KQ+P R+EHP F+VQ VYD V++K+ TDK+++ ++ EID LV KT R+G
Sbjct: 182 VPENKQIPNRREHPCFIVQNVYDFVKKKVRKFTDKNFDVHQKNEIDRLVAKTSLRLG--- 238
Query: 258 DVEPEDAPDDQEDLV----KNKRSLRRKSVSPPDVSKEEEGVPKSDQHPKPETPGSCINN 313
D PD ++D V K KR+++RKS PK+
Sbjct: 239 -----DLPDIEKDQVTKTSKGKRTVQRKS-------------PKT--------------- 265
Query: 314 ASEHYRILVSFNALTGDVQRDKWLERSLQHLQYMCSSDDSTERDNKGSNVNCDEIKHQNS 373
++ + IL F+ LTGD RDK L L+ +++ C +
Sbjct: 266 STVYKSILEDFDLLTGDSDRDKRLGELLEAVKHECRTS---------------------- 303
Query: 374 NTSSEIANDCQDKGQKSSKPFKWPDAAVSAIVALEKASHDAFSSDFQKYNQKLRQLTFNL 433
+ KG + + WPD V + ALE +D+ + D KY+ KL L L
Sbjct: 304 ----------KKKGARDDDSY-WPDDVVPVVRALEHVFYDSMAEDMSKYHHKLEILVDEL 352
Query: 434 K 434
K
Sbjct: 353 K 353
>AT3G43990.1 | Symbols: | bromo-adjacent homology (BAH)
domain-containing protein | chr3:15793525-15796165
REVERSE
Length = 380
Score = 195 bits (496), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 100/223 (44%), Positives = 149/223 (66%), Gaps = 6/223 (2%)
Query: 78 QPPEDAKPIGDPVRFSGKGRGRKKHFNSFEFDGSQYTLEDPVLLVPEDKEQKPYVAIIKD 137
+P + AK IG P++F+GKG+ +K H+ +FEF G QY L+D VLL PED +QK Y+AIIKD
Sbjct: 49 RPSDCAKSIGKPIKFTGKGQNKKCHYETFEFHGKQYRLKDFVLLYPEDNKQKEYIAIIKD 108
Query: 138 I-TQPYNGNIMVTGQWFYRPEEAEKKGGGSWISRDTRELFYSFHTDDIPAESVMHKCVVH 196
I +Q +G + + QWFYR E+ E+K G W + + RE+F+SFH D++ AESV +KC+V+
Sbjct: 109 IYSQEKDGLVKMEVQWFYRREDIEEKHFGKWKTENPREIFFSFHCDEVFAESVKYKCLVY 168
Query: 197 FIPLHKQLPKRKEHPGFVVQKVYDTVERKLWMLTDKDYEDIKQQEIDELVKKTVERIGEP 256
F+P KQ+P R H GF+VQ VYD V +K+ + + +E+ ++ EID LV KTV RIG
Sbjct: 169 FVPDDKQIPNRIHHSGFIVQMVYDNVRKKVRKFSHEGFEEEQKFEIDMLVAKTVSRIGNL 228
Query: 257 LDVEPEDAPDDQEDLVKNKRSLRR-KSVSPPDVSKEEEGVPKS 298
+DVE + + KR +R+ + +S +S++ E +P S
Sbjct: 229 VDVEKVQTT----TIPRRKRIVRKCERMSSNPISEKLESLPSS 267
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 400 AVSAIVALEKASHDAFSSDFQKYNQKLRQLTFNLKNNAFLARRLLNGELEPSKILNMT 457
V ++ALE+A +D+F+ D KYN KL L LKN+ LA RLLNGEL+P + + M
Sbjct: 298 VVQMVLALEEALYDSFADDVPKYNYKLELLVERLKNSRVLATRLLNGELKPEQAIKMA 355
>AT3G48050.2 | Symbols: | bromo-adjacent homology (BAH)
domain-containing protein | chr3:17745255-17750397
REVERSE
Length = 1613
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 80/141 (56%), Gaps = 4/141 (2%)
Query: 109 DGSQYTLEDPVLLVPEDKEQKPYVAIIKDITQPYNGNIMVTGQWFYRPEEAEKKGGGSWI 168
DG + ++ D L P ++ P++ II+ I + + W YRP E K G G +
Sbjct: 47 DGRKISVGDCALFKPP-QDCPPFIGIIRLIIAEEEDKLKLGVNWLYRPTEL-KLGKGILL 104
Query: 169 SRDTRELFYSFHTDDIPAESVMHKCVVHFIPLHKQLPKRKEHPGFVVQKVYDTVERKLWM 228
+ ELFYSFH D+IPA S++H C V F+P +LP FV ++VYD +LW
Sbjct: 105 EAEPNELFYSFHEDNIPAASLLHPCKVAFLPRGVELPSGISS--FVCRRVYDVTNERLWW 162
Query: 229 LTDKDYEDIKQQEIDELVKKT 249
LTD+DY D +Q E+D+L+ KT
Sbjct: 163 LTDQDYIDDRQLEVDKLLCKT 183
>AT3G48050.1 | Symbols: | bromo-adjacent homology (BAH)
domain-containing protein | chr3:17745255-17750397
REVERSE
Length = 1613
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 80/141 (56%), Gaps = 4/141 (2%)
Query: 109 DGSQYTLEDPVLLVPEDKEQKPYVAIIKDITQPYNGNIMVTGQWFYRPEEAEKKGGGSWI 168
DG + ++ D L P ++ P++ II+ I + + W YRP E K G G +
Sbjct: 47 DGRKISVGDCALFKPP-QDCPPFIGIIRLIIAEEEDKLKLGVNWLYRPTEL-KLGKGILL 104
Query: 169 SRDTRELFYSFHTDDIPAESVMHKCVVHFIPLHKQLPKRKEHPGFVVQKVYDTVERKLWM 228
+ ELFYSFH D+IPA S++H C V F+P +LP FV ++VYD +LW
Sbjct: 105 EAEPNELFYSFHEDNIPAASLLHPCKVAFLPRGVELPSGISS--FVCRRVYDVTNERLWW 162
Query: 229 LTDKDYEDIKQQEIDELVKKT 249
LTD+DY D +Q E+D+L+ KT
Sbjct: 163 LTDQDYIDDRQLEVDKLLCKT 183
>AT3G48060.1 | Symbols: | bromo-adjacent homology (BAH)
domain-containing protein | chr3:17754219-17759357
REVERSE
Length = 1611
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 55/141 (39%), Positives = 80/141 (56%), Gaps = 4/141 (2%)
Query: 109 DGSQYTLEDPVLLVPEDKEQKPYVAIIKDITQPYNGNIMVTGQWFYRPEEAEKKGGGSWI 168
DG + ++ D L P ++ P++ II+ I + + W YRP E K G G +
Sbjct: 47 DGRKISVGDCALFKPP-QDCPPFIGIIRLIIAEEEDKLKLGVNWLYRPTEL-KLGKGILL 104
Query: 169 SRDTRELFYSFHTDDIPAESVMHKCVVHFIPLHKQLPKRKEHPGFVVQKVYDTVERKLWM 228
+ ELFYSFH D+IPA S++H C V F+P +LP FV ++VYD +LW
Sbjct: 105 EAEPNELFYSFHEDNIPAASLLHPCKVAFLPRGVELPSGISS--FVCRRVYDVTNERLWW 162
Query: 229 LTDKDYEDIKQQEIDELVKKT 249
LTD+DY D +Q E+D+L+ KT
Sbjct: 163 LTDQDYIDDRQLEVDKLLCKT 183
>AT1G68580.2 | Symbols: | agenet domain-containing protein /
bromo-adjacent homology (BAH) domain-containing protein
| chr1:25756532-25759294 FORWARD
Length = 648
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 14/134 (10%)
Query: 92 FSGKGRGRKKHFNSFEFDGSQYTLEDPVLLVPEDKEQKPYVAIIKDITQPYNGNIMVTGQ 151
FS R R+KH+ S+ +G + ++ D V ++ E + K VA I+D+ + G MV +
Sbjct: 130 FSWTCRKRRKHYQSYLRNGVRISVNDFVYVLAE--QHKRLVAYIEDLYEDSKGKKMVVVR 187
Query: 152 WFYRPEEAEKKGGGSWISRD--TRELFYSFHTDDIPAESVMHKCVVHFIPLHKQ----LP 205
WF++ EE GS +S D RE+F+S + DI E + + V P H + +P
Sbjct: 188 WFHKTEEV-----GSVLSDDDNDREIFFSLNRQDISIECIDYLATV-LSPQHYEKFLKVP 241
Query: 206 KRKEHPGFVVQKVY 219
+ F QK+Y
Sbjct: 242 MHVQTVAFFCQKLY 255
>AT4G22140.2 | Symbols: | DNA binding | chr4:11728105-11730242
REVERSE
Length = 224
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 100 KKHFNSFEFDGSQYTLE--DPVLLVPEDKEQKPYVAIIKDITQPYNGNIMVTGQWFYRPE 157
+K +S+ G+ + D VL+ P D + PYVA ++ I N+ V +W+YRPE
Sbjct: 16 RKELDSYTIKGTNKVVRAGDCVLMRPSDAGKPPYVARVEKIEADARNNVKVHCRWYYRPE 75
Query: 158 EAEKKGGGSWISRDTRELFYSFHTDDIPAESVMHKCVVHFIPLHKQL 204
E+ GG +ELF S H D A ++ KC+VH + +L
Sbjct: 76 ESL---GGRRQFHGAKELFLSDHFDVQSAHTIEGKCIVHTFKNYTRL 119
>AT4G22140.1 | Symbols: | DNA binding | chr4:11728568-11730242
REVERSE
Length = 234
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 5/107 (4%)
Query: 100 KKHFNSFEFDGSQYTLE--DPVLLVPEDKEQKPYVAIIKDITQPYNGNIMVTGQWFYRPE 157
+K +S+ G+ + D VL+ P D + PYVA ++ I N+ V +W+YRPE
Sbjct: 16 RKELDSYTIKGTNKVVRAGDCVLMRPSDAGKPPYVARVEKIEADARNNVKVHCRWYYRPE 75
Query: 158 EAEKKGGGSWISRDTRELFYSFHTDDIPAESVMHKCVVHFIPLHKQL 204
E+ GG +ELF S H D A ++ KC+VH + +L
Sbjct: 76 ESL---GGRRQFHGAKELFLSDHFDVQSAHTIEGKCIVHTFKNYTRL 119
>AT1G68580.1 | Symbols: | agenet domain-containing protein /
bromo-adjacent homology (BAH) domain-containing protein
| chr1:25757245-25758722 FORWARD
Length = 396
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 14/134 (10%)
Query: 92 FSGKGRGRKKHFNSFEFDGSQYTLEDPVLLVPEDKEQKPYVAIIKDITQPYNGNIMVTGQ 151
FS R R+KH+ S+ +G + ++ D V ++ E + K VA I+D+ + G MV +
Sbjct: 34 FSWTCRKRRKHYQSYLRNGVRISVNDFVYVLAE--QHKRLVAYIEDLYEDSKGKKMVVVR 91
Query: 152 WFYRPEEAEKKGGGSWISRD--TRELFYSFHTDDIPAESVMHKCVVHFIPLHKQ----LP 205
WF++ EE GS +S D RE+F+S + DI E + + V P H + +P
Sbjct: 92 WFHKTEEV-----GSVLSDDDNDREIFFSLNRQDISIECIDYLATV-LSPQHYEKFLKVP 145
Query: 206 KRKEHPGFVVQKVY 219
+ F QK+Y
Sbjct: 146 MHVQTVAFFCQKLY 159
>AT4G04260.1 | Symbols: | bromo-adjacent homology (BAH)
domain-containing protein | chr4:2054634-2055847 FORWARD
Length = 193
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 123 PEDKEQKPYVAIIKDITQPYNGNIMVTGQWFYRPEEAEKKGGGSWISRDTRELFYSFHTD 182
P D + PYVA ++ I N+ V +W+Y PEE+ GG +ELF S H D
Sbjct: 3 PSDAGKAPYVARVEKIEADARNNVKVHCRWYYCPEESH---GGRRQLHGAKELFLSDHFD 59
Query: 183 DIPAESVMHKCVVH 196
A ++ KC+VH
Sbjct: 60 VQSAHTIEGKCIVH 73
>AT5G25520.2 | Symbols: | transcription elongation factor-related |
chr5:8885553-8889487 FORWARD
Length = 997
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 24/163 (14%)
Query: 365 CDEIKHQNS----------NTSSEIANDCQDKGQ-KSSKPFKWPDAAVSAIVALEKASHD 413
CD+++ +S N S + D G+ ++ K F+ P+ S I E
Sbjct: 317 CDDVRFSDSIFTGDELLQGNGLSWVLEPVSDFGENETQKSFEDPELLASKI---ELELFK 373
Query: 414 AFSSDFQKYNQKLRQLTFNLK--NNAFLARRLLNGELEPSKILNMTYSELKEGLTAEEKT 471
F +KY +K R L FNLK NN L +++G++ P ++ NMT EL ++ +
Sbjct: 374 LFGGVNKKYKEKGRSLLFNLKDKNNPELRESVMSGKISPERLCNMTAEELASKELSQWRQ 433
Query: 472 KKEPDESEHMQMTDARCSRCMEFKVGLRDIIHAGHNDRYQLEC 514
K + +E + + D + +R+++ H +Q+E
Sbjct: 434 AKAEEMAEMVVLRDT--------DIDVRNLVRKTHKGEFQVEI 468
>AT5G25520.1 | Symbols: | transcription elongation factor-related |
chr5:8885553-8888160 FORWARD
Length = 735
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 73/163 (44%), Gaps = 24/163 (14%)
Query: 365 CDEIKHQNS----------NTSSEIANDCQDKGQ-KSSKPFKWPDAAVSAIVALEKASHD 413
CD+++ +S N S + D G+ ++ K F+ P+ S I E
Sbjct: 317 CDDVRFSDSIFTGDELLQGNGLSWVLEPVSDFGENETQKSFEDPELLASKI---ELELFK 373
Query: 414 AFSSDFQKYNQKLRQLTFNLK--NNAFLARRLLNGELEPSKILNMTYSELKEGLTAEEKT 471
F +KY +K R L FNLK NN L +++G++ P ++ NMT EL ++ +
Sbjct: 374 LFGGVNKKYKEKGRSLLFNLKDKNNPELRESVMSGKISPERLCNMTAEELASKELSQWRQ 433
Query: 472 KKEPDESEHMQMTDARCSRCMEFKVGLRDIIHAGHNDRYQLEC 514
K + +E + + D + +R+++ H +Q+E
Sbjct: 434 AKAEEMAEMVVLRDT--------DIDVRNLVRKTHKGEFQVEI 468
>AT5G11430.1 | Symbols: | transcription elongation factor-related |
chr5:3648470-3652257 FORWARD
Length = 873
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 13/136 (9%)
Query: 381 NDCQDKGQKSSKPFKWPDAAVSAIVALEKASHDAFSSDFQKYNQKLRQLTFNLK--NNAF 438
+ +D G K F+ P S I E + F +KY ++ R L FNLK NN
Sbjct: 245 GETKDYGTGGEKSFQDPKLLASKI---EMELYKLFGGVNKKYRERGRSLLFNLKDKNNPE 301
Query: 439 LARRLLNGELEPSKILNMTYSELKEGLTAEEKTKKEPDESEHMQMTDARCSRCMEFKVGL 498
L R+++ E+ ++ +MT E L ++E ++ ++E M A+ + + +
Sbjct: 302 LRERVMSEEISAERLCSMTAEE----LASKELSQWRQAKAEEM----AKMVVLQDTDIDV 353
Query: 499 RDIIHAGHNDRYQLEC 514
R ++ H +Q+E
Sbjct: 354 RSLVRKTHKGEFQVEI 369