Miyakogusa Predicted Gene

chr2.CM0249.1160.nc
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr2.CM0249.1160.nc + phase: 0 
         (177 letters)

Database: TAIR8_pep 
           32,825 sequences; 13,166,001 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G18250.1 | Symbols: ATCOAD | ATCOAD (4-PHOSPHOPANTETHEINE ADE...   249   5e-67

>AT2G18250.1 | Symbols: ATCOAD | ATCOAD (4-PHOSPHOPANTETHEINE
           ADENYLYLTRANSFERASE); nucleotidyltransferase/
           pantetheine-phosphate adenylyltransferase |
           chr2:7947107-7948581 FORWARD
          Length = 176

 Score =  249 bits (637), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 117/158 (74%), Positives = 139/158 (87%)

Query: 13  LSPPNTYEAVVNGGTFDRLHDGHRLFLTASAQLARRRIVIGVCDGPMLAKKQFAELIQPI 72
           +SP N++ AVV GGTFDRLHDGHR+FL A+A+LAR RIV+GVCDGPML KKQF+++IQPI
Sbjct: 9   MSPANSFGAVVLGGTFDRLHDGHRMFLKAAAELARDRIVVGVCDGPMLTKKQFSDMIQPI 68

Query: 73  EKRTHEVEAFIKSIKPDLEVQAVPITDPYGPSIVDENLEAVIVSKETLPGGLAVNRKRVE 132
           E+R   VE ++KSIKP+L VQA PITDPYGPSIVDENLEA++VSKETLPGGL+VNRKR E
Sbjct: 69  EERMRNVETYVKSIKPELVVQAEPITDPYGPSIVDENLEAIVVSKETLPGGLSVNRKRAE 128

Query: 133 KGLSQLKIEVVDLVSGESGGTKLSSSMLRKLEAEKAQK 170
           +GLSQLKIEVV++VS  S G K+SSS LRK+EAEKA K
Sbjct: 129 RGLSQLKIEVVEIVSDGSSGNKISSSTLRKMEAEKASK 166