Miyakogusa Predicted Gene
- chr2.CM0168.280.nc
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr2.CM0168.280.nc - phase: 0
(601 letters)
Database: TAIR8_pep
32,825 sequences; 13,166,001 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G67530.1 | Symbols: | peptidyl-prolyl cis-trans isomerase cy... 761 0.0
AT1G01940.1 | Symbols: | peptidyl-prolyl cis-trans isomerase cy... 156 4e-38
AT2G36130.1 | Symbols: | peptidyl-prolyl cis-trans isomerase, p... 134 2e-31
AT3G44600.1 | Symbols: CYP71 | CYP71 (CYCLOPHILIN71); chromatin ... 133 3e-31
AT4G33060.1 | Symbols: | peptidyl-prolyl cis-trans isomerase cy... 116 5e-26
AT3G63400.2 | Symbols: | peptidyl-prolyl cis-trans isomerase cy... 105 9e-23
AT3G63400.1 | Symbols: | peptidyl-prolyl cis-trans isomerase cy... 104 2e-22
AT5G13120.1 | Symbols: | peptidyl-prolyl cis-trans isomerase cy... 102 7e-22
AT2G15790.1 | Symbols: CYP40, SQN | SQN (SQUINT) | chr2:6885226-... 97 2e-20
AT3G56070.2 | Symbols: ROC2 | ROC2 (rotamase CyP 2) | chr3:20817... 95 1e-19
AT3G56070.1 | Symbols: ROC2 | ROC2 (rotamase CyP 2); peptidyl-pr... 95 1e-19
AT1G53720.1 | Symbols: ATCYP59, CYP59 | ATCYP59/CYP59 (CYCLOPHIL... 94 2e-19
AT4G34870.1 | Symbols: ATCYP1, ROC5 | ROC5 (ROTAMASE CYP 5); pep... 88 2e-17
AT2G16600.1 | Symbols: ROC3 | ROC3 (rotamase CyP 3); peptidyl-pr... 88 2e-17
AT3G62030.1 | Symbols: ROC4 | ROC4 (ROTAMASE CYP 4); peptidyl-pr... 86 6e-17
AT3G55920.1 | Symbols: | peptidyl-prolyl cis-trans isomerase, p... 86 7e-17
AT4G38740.1 | Symbols: ROC1 | ROC1 (rotamase CyP 1); peptidyl-pr... 85 1e-16
AT2G29960.1 | Symbols: ATCYP5, CYP19-4, CYP5 | CYP5 (cyclophilin... 84 3e-16
AT2G21130.1 | Symbols: | peptidyl-prolyl cis-trans isomerase / ... 84 3e-16
AT2G38730.1 | Symbols: | peptidyl-prolyl cis-trans isomerase, p... 80 3e-15
AT5G58710.1 | Symbols: ROC7 | ROC7 (rotamase CyP 7); peptidyl-pr... 79 8e-15
AT4G34960.1 | Symbols: | peptidyl-prolyl cis-trans isomerase, p... 78 2e-14
AT2G16600.2 | Symbols: ROC3 | ROC3 (rotamase CyP 3) | chr2:72079... 73 7e-13
AT2G47320.1 | Symbols: | peptidyl-prolyl cis-trans isomerase cy... 67 4e-11
AT2G29960.2 | Symbols: ATCYP5, CYP19-4, CYP5 | CYP5 (cyclophilin... 64 2e-10
AT3G66654.2 | Symbols: | peptidyl-prolyl cis-trans isomerase cy... 55 1e-07
AT3G66654.3 | Symbols: | peptidyl-prolyl cis-trans isomerase cy... 55 1e-07
AT3G66654.1 | Symbols: | peptidyl-prolyl cis-trans isomerase cy... 55 1e-07
AT4G32420.1 | Symbols: | peptidyl-prolyl cis-trans isomerase cy... 49 7e-06
>AT5G67530.1 | Symbols: | peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein | chr5:26958486-26961104
FORWARD
Length = 595
Score = 761 bits (1965), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 378/602 (62%), Positives = 425/602 (70%), Gaps = 8/602 (1%)
Query: 1 MGKKQHSKDRMFITKTEWATEWGGFKSKDNRTVFKRLPFYCCALTFTPFEYPVCTPDGSV 60
MGKKQHSKDRMFITKTEWATEWGG KSK+NRT FK LP+YCCALTF PFE PVCT DGSV
Sbjct: 1 MGKKQHSKDRMFITKTEWATEWGGAKSKENRTPFKSLPYYCCALTFLPFEDPVCTIDGSV 60
Query: 61 FDVMNITPYVIKYGKHPVTGTPLKQQDLIPLNFHKNSEGEFQCPVLNKVFTEFTHIVAVK 120
F++ I PY+ K+GKHPVTG PLK +DLIPL FHKNSEGE+ CPVLNKVFTEFTHIVAVK
Sbjct: 61 FEITTIVPYIRKFGKHPVTGAPLKGEDLIPLIFHKNSEGEYHCPVLNKVFTEFTHIVAVK 120
Query: 121 TTGNVFCYEAVKELNIKTKNWKELLTDEPFTRDDLITIQNPNALDSKVLLDFDHVKHNLK 180
TTGNVFCYEA+KELNIKTKNWKELLT+EPFTR DLITIQNPNA+D KV ++FDHVK+ LK
Sbjct: 121 TTGNVFCYEAIKELNIKTKNWKELLTEEPFTRADLITIQNPNAVDGKVTVEFDHVKNGLK 180
Query: 181 IDDEELQKMSSDPTYNINMSGDLKQMFQEIGTEKGKETAMHXXXXXXXXXXXXXXXXXXX 240
IDDEEL+KM+SDP YNIN+SGD+K M ++GT+K KE A+H
Sbjct: 181 IDDEELKKMNSDPAYNINVSGDIKHMLADLGTDKAKEIALHGGGGNKARNERAAAIAAIL 240
Query: 241 XXXXXXKEDSKSNPNEEAKAPQAFSIVDAASASVHGRXXXXXXXXXXXXXXXRIAMHKAG 300
KE SK+ E+ K Q +S+VDAASASV GR RIAMH AG
Sbjct: 241 ESRSKIKEVSKA---EQPK--QTYSVVDAASASVFGRSADAAKAGSSDKTAARIAMHMAG 295
Query: 301 DRAPVNAKLVKSRYTTGAASRSFTSTSFDPVTKNEFEYVKVEKNPKKKGYVQLHTTHGEL 360
DR PVN+K+VKSRY++GAASRSFTS++F PVTKN+FE +KVEKNPKKKGYVQ TTHG+L
Sbjct: 296 DRTPVNSKMVKSRYSSGAASRSFTSSAFTPVTKNDFELIKVEKNPKKKGYVQFQTTHGDL 355
Query: 361 NIELHCDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQXXXXXXXXXXXESIWGKPFK 420
NIELHCDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQ ESIWGKPFK
Sbjct: 356 NIELHCDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQGGDPTGTGKGGESIWGKPFK 415
Query: 421 DELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVFXXXXXXXXXXXXME 480
DE NSKL+HSGRGVVSMANSGPHTNGSQFF+LYKSA HLN+KHTVF ME
Sbjct: 416 DEPNSKLLHSGRGVVSMANSGPHTNGSQFFVLYKSATHLNYKHTVFGGVVGGLATLAAME 475
Query: 481 KVPVDDDDRPLDEIKITNVTIFVNPYTEPXXXXXXXXXXXXXXXXXXXXXIGSWYSNPGA 540
VPVD+ DRPL+EIKI ++FVNPYTE IGSWYSNPG+
Sbjct: 476 NVPVDESDRPLEEIKIIEASVFVNPYTELDEEEEKEKAEKEKNEDKDIEKIGSWYSNPGS 535
Query: 541 GISEXXXXXXXXXXXXYLKARSAQA-ESANVDXXXXXXXXXXXXXXXXXXXXSSEFNDFS 599
YLKA S+ A + S+ F DFS
Sbjct: 536 --GTTEAGAGGGGVGKYLKAMSSTATKDTKGSLDSDISTIGVSKKRKTTASASTGFKDFS 593
Query: 600 AW 601
+W
Sbjct: 594 SW 595
>AT1G01940.1 | Symbols: | peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein | chr1:323082-324719
FORWARD
Length = 160
Score = 156 bits (394), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 74/155 (47%), Positives = 92/155 (59%)
Query: 351 VQLHTTHGELNIELHCDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQXXXXXXXXXX 410
V LHT G++ E+ CD P++ ENF+ LC GYY+G FHR+I+ FMIQ
Sbjct: 3 VTLHTNLGDIKCEIFCDEVPKSAENFLALCASGYYDGTIFHRNIKGFMIQGGDPKGTGKG 62
Query: 411 XESIWGKPFKDELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVFXXXX 470
SIWGK F DE+ L H+ RG++SMANSGP+TNGSQFFI Y PHLN +T+F
Sbjct: 63 GTSIWGKKFNDEIRDSLKHNARGMLSMANSGPNTNGSQFFITYAKQPHLNGLYTIFGKVI 122
Query: 471 XXXXXXXXMEKVPVDDDDRPLDEIKITNVTIFVNP 505
MEK DRPL EI++ VTI NP
Sbjct: 123 HGFEVLDIMEKTQTGPGDRPLAEIRLNRVTIHANP 157
>AT2G36130.1 | Symbols: | peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative |
chr2:15173942-15175338 FORWARD
Length = 164
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 89/152 (58%)
Query: 351 VQLHTTHGELNIELHCDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQXXXXXXXXXX 410
V L T+ G +E++ +PR C NF+ L RGYY+ V FHR +++F++Q
Sbjct: 12 VTLETSMGPFTVEMYYKHSPRTCRNFLELSRRGYYDNVLFHRIVKDFIVQGGDPTGTGRG 71
Query: 411 XESIWGKPFKDELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVFXXXX 470
ESI+G F+DE+N +L H+G G++SMAN+GP+TNGSQFFI P L+ KHT+F
Sbjct: 72 GESIYGSKFEDEINKELKHTGAGILSMANAGPNTNGSQFFITLAPQPSLDGKHTIFGRVC 131
Query: 471 XXXXXXXXMEKVPVDDDDRPLDEIKITNVTIF 502
+ V D+ DRP+ E+KI +
Sbjct: 132 RGMEVIKRLGSVQTDNTDRPIHEVKILRTKVI 163
>AT3G44600.1 | Symbols: CYP71 | CYP71 (CYCLOPHILIN71); chromatin
binding / histone binding / peptidyl-prolyl cis-trans
isomerase | chr3:16176355-16180188 REVERSE
Length = 631
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/151 (43%), Positives = 90/151 (59%)
Query: 351 VQLHTTHGELNIELHCDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQXXXXXXXXXX 410
V +HTT G+++++L+ + P+ ENF T C GYY+ FHR IR FMIQ
Sbjct: 478 VIMHTTLGDIHMKLYPEECPKTVENFTTHCRNGYYDNHLFHRVIRGFMIQTGDPLGDGTG 537
Query: 411 XESIWGKPFKDELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVFXXXX 470
+SIWG+ F+DE + L H +SMAN+GP+TNGSQFFI + P L+ KHTVF
Sbjct: 538 GQSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVATPWLDNKHTVFGRVV 597
Query: 471 XXXXXXXXMEKVPVDDDDRPLDEIKITNVTI 501
+EKV D +DRP ++KI NVT+
Sbjct: 598 KGMDVVQGIEKVKTDKNDRPYQDVKILNVTV 628
>AT4G33060.1 | Symbols: | peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein | chr4:15948538-15951957
FORWARD
Length = 504
Score = 116 bits (290), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 64/167 (38%), Positives = 92/167 (55%), Gaps = 3/167 (1%)
Query: 345 PKKKGYVQLHTTHGELNIELHCDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQXXXX 404
P KG V ++TTHG +++EL AP++ NF+ LC GY++ FHR I F++Q
Sbjct: 9 PPTKGKVIVNTTHGPIDVELWPKEAPKSVRNFVQLCLEGYFDNTIFHRVIPGFLVQGGDP 68
Query: 405 XXXXXXXESIWGKPFKDELNSKLVHSGRGVVSMAN-SGPHTNGSQFFILYKSAPHLNFKH 463
+SI+G F DE +S+L S RG+V+MAN S P++NGSQFF L+ KH
Sbjct: 69 TGSGTGGDSIYGGVFADEFHSRLRFSHRGIVAMANASSPNSNGSQFFFTLDKCDWLDKKH 128
Query: 464 TVFXXXXXXXX-XXXXMEKVPVDDDDRPLDEI-KITNVTIFVNPYTE 508
T+F + +V DDRPLD KI +V + NP+ +
Sbjct: 129 TIFGKVTGDSIYNLLRLGEVDTSKDDRPLDPAPKILSVEVLWNPFED 175
>AT3G63400.2 | Symbols: | peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein | chr3:23423424-23426410
FORWARD
Length = 387
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 78/149 (52%), Gaps = 14/149 (9%)
Query: 362 IELHCDIAPRACENFITLC--ERG---------YYNGVAFHRSIRNFMIQXXX-XXXXXX 409
IEL D+ P+ ENF LC E G ++ G +FHR I+ FM Q
Sbjct: 25 IELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSSFHRVIKGFMAQGGDFSNGNGT 84
Query: 410 XXESIWGKPFKDELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVFXXX 469
ESI+G F DE N +L H G GV+SMAN GP+TNGSQFFIL+K PHL+ KH VF
Sbjct: 85 GGESIYGGKFSDE-NFRLDHDGAGVLSMANCGPNTNGSQFFILFKRQPHLDGKHVVFGKV 143
Query: 470 XXXXXXXXXMEKVPVDDDDRPLDEIKITN 498
ME V D +P +KI +
Sbjct: 144 VEGMAVIKKMELVGT-SDGKPTSPVKIID 171
>AT3G63400.1 | Symbols: | peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein | chr3:23423424-23426410
FORWARD
Length = 570
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 78/149 (52%), Gaps = 14/149 (9%)
Query: 362 IELHCDIAPRACENFITLC--ERG---------YYNGVAFHRSIRNFMIQXXX-XXXXXX 409
IEL D+ P+ ENF LC E G ++ G +FHR I+ FM Q
Sbjct: 25 IELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGSSFHRVIKGFMAQGGDFSNGNGT 84
Query: 410 XXESIWGKPFKDELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVFXXX 469
ESI+G F DE N +L H G GV+SMAN GP+TNGSQFFIL+K PHL+ KH VF
Sbjct: 85 GGESIYGGKFSDE-NFRLDHDGAGVLSMANCGPNTNGSQFFILFKRQPHLDGKHVVFGKV 143
Query: 470 XXXXXXXXXMEKVPVDDDDRPLDEIKITN 498
ME V D +P +KI +
Sbjct: 144 VEGMAVIKKMELVGT-SDGKPTSPVKIID 171
>AT5G13120.1 | Symbols: | peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein | chr5:4162717-4164723
REVERSE
Length = 259
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 60/145 (41%), Positives = 80/145 (55%), Gaps = 5/145 (3%)
Query: 358 GELNIELHCDIAPRACENFITLC--ERGY-YNGVAFHRSIRNFMIQXXX-XXXXXXXXES 413
G + I L+ D P+ ENF LC E+G+ Y G FHR IR+FMIQ +S
Sbjct: 107 GRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVIRDFMIQGGDFEKGNGTGGKS 166
Query: 414 IWGKPFKDELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVFXXXXXXX 473
++G+ FKDE N KL H G GV+SMAN+GP+TNGSQFFI L+ +H VF
Sbjct: 167 VYGRTFKDE-NFKLSHVGPGVLSMANAGPNTNGSQFFICTIKTSWLDGRHVVFGQVIEGM 225
Query: 474 XXXXXMEKVPVDDDDRPLDEIKITN 498
+E+ D DRP ++ I +
Sbjct: 226 EVVKLIEEQETDRGDRPRKKVVIAD 250
>AT2G15790.1 | Symbols: CYP40, SQN | SQN (SQUINT) |
chr2:6885226-6887825 REVERSE
Length = 361
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 79/151 (52%), Gaps = 13/151 (8%)
Query: 358 GELNIELHCDIAPRACENFITLC--ERG---------YYNGVAFHRSIRNFMIQXXX-XX 405
G + IEL+ D+ P+ ENF LC E+G +Y G FHR I+ FMIQ
Sbjct: 18 GRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNRFHRVIKGFMIQGGDISA 77
Query: 406 XXXXXXESIWGKPFKDELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTV 465
ESI+G F DE N +L H +G++SMANSGP+TNGSQFFI HL+ KH V
Sbjct: 78 NDGTGGESIYGLKFDDE-NFELKHERKGMLSMANSGPNTNGSQFFITTTRTSHLDGKHVV 136
Query: 466 FXXXXXXXXXXXXMEKVPVDDDDRPLDEIKI 496
F +E V +++ P ++ I
Sbjct: 137 FGRVTKGMGVVRSIEHVSIEEQSCPSQDVVI 167
>AT3G56070.2 | Symbols: ROC2 | ROC2 (rotamase CyP 2) |
chr3:20817966-20818496 REVERSE
Length = 176
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 79/159 (49%), Gaps = 13/159 (8%)
Query: 358 GELNIELHCDIAPRACENFITLC--ERG--------YYNGVAFHRSIRNFMIQXXX-XXX 406
G + +EL D+ PR NF LC E G +Y G AFHR I FM Q
Sbjct: 18 GRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRIIPGFMCQGGDFTRG 77
Query: 407 XXXXXESIWGKPFKDELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVF 466
ESI+G F+DE N KL H+G G++SMANSGP+TNGSQFFI + L+ KH VF
Sbjct: 78 NGTGGESIYGSKFEDE-NFKLKHTGPGILSMANSGPNTNGSQFFICTEKTSWLDGKHVVF 136
Query: 467 XXXXXXXXXXXXMEKVPVDDDDRPLDEIKITNVTIFVNP 505
ME V D + P + + I + NP
Sbjct: 137 GKVVDGYNVVKAMEDVGSDMGN-PSERVVIEDCGELKNP 174
>AT3G56070.1 | Symbols: ROC2 | ROC2 (rotamase CyP 2);
peptidyl-prolyl cis-trans isomerase |
chr3:20817966-20818496 REVERSE
Length = 176
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/159 (39%), Positives = 79/159 (49%), Gaps = 13/159 (8%)
Query: 358 GELNIELHCDIAPRACENFITLC--ERG--------YYNGVAFHRSIRNFMIQXXX-XXX 406
G + +EL D+ PR NF LC E G +Y G AFHR I FM Q
Sbjct: 18 GRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAFHRIIPGFMCQGGDFTRG 77
Query: 407 XXXXXESIWGKPFKDELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVF 466
ESI+G F+DE N KL H+G G++SMANSGP+TNGSQFFI + L+ KH VF
Sbjct: 78 NGTGGESIYGSKFEDE-NFKLKHTGPGILSMANSGPNTNGSQFFICTEKTSWLDGKHVVF 136
Query: 467 XXXXXXXXXXXXMEKVPVDDDDRPLDEIKITNVTIFVNP 505
ME V D + P + + I + NP
Sbjct: 137 GKVVDGYNVVKAMEDVGSDMGN-PSERVVIEDCGELKNP 174
>AT1G53720.1 | Symbols: ATCYP59, CYP59 | ATCYP59/CYP59 (CYCLOPHILIN
59); RNA binding / nucleic acid binding /
peptidyl-prolyl cis-trans isomerase |
chr1:20060680-20063176 FORWARD
Length = 506
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 84/167 (50%), Gaps = 8/167 (4%)
Query: 351 VQLHTTHGELNIELHCDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQXXXXXXXXXX 410
V + T+ G++ I+LH D P C+NF+ LC+ YYNG FH ++F Q
Sbjct: 3 VLIVTSLGDIVIDLHSDKCPLTCKNFLKLCKIKYYNGCLFHTVQKDFTAQTGDPTGTGAG 62
Query: 411 XESIW-------GKPFKDELNSKLVHSGRGVVSMANSGPHTNGSQF-FILYKSAPHLNFK 462
+SI+ + +KDE++ L HS G V+MA+ G + N SQF F L +L+ K
Sbjct: 63 GDSIYKFLYGEQARFYKDEIHLDLKHSKTGTVAMASGGENLNASQFYFTLRDDLDYLDGK 122
Query: 463 HTVFXXXXXXXXXXXXMEKVPVDDDDRPLDEIKITNVTIFVNPYTEP 509
HTVF + + VD +RP I+I + I +P+ +P
Sbjct: 123 HTVFGQIAEGFDTLTRINEAYVDPKNRPYKNIRIKHTHILDDPFDDP 169
>AT4G34870.1 | Symbols: ATCYP1, ROC5 | ROC5 (ROTAMASE CYP 5);
peptidyl-prolyl cis-trans isomerase |
chr4:16614456-16614974 FORWARD
Length = 172
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 68/139 (48%), Gaps = 12/139 (8%)
Query: 358 GELNIELHCDIAPRACENFITLC--ERG--------YYNGVAFHRSIRNFMIQXXX-XXX 406
G + +EL D P ENF LC E+G ++ G FHR I FM Q
Sbjct: 18 GRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIFHRVIPGFMCQGGDFTAK 77
Query: 407 XXXXXESIWGKPFKDELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVF 466
ESI+G FKDE N H+G G++SMANSGP+TNGSQFFI L+ KH VF
Sbjct: 78 NGTGGESIYGAKFKDE-NFIKKHTGAGILSMANSGPNTNGSQFFICTDKTSWLDGKHVVF 136
Query: 467 XXXXXXXXXXXXMEKVPVD 485
+EKV D
Sbjct: 137 GQVVKGLDVVKAIEKVGSD 155
>AT2G16600.1 | Symbols: ROC3 | ROC3 (rotamase CyP 3);
peptidyl-prolyl cis-trans isomerase |
chr2:7207944-7208465 FORWARD
Length = 173
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 70/139 (50%), Gaps = 12/139 (8%)
Query: 358 GELNIELHCDIAPRACENFITLC--ERG--------YYNGVAFHRSIRNFMIQXXX-XXX 406
G + +EL+ D P ENF LC ERG +Y G +FHR I FM Q
Sbjct: 19 GRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRVIPKFMCQGGDFTAG 78
Query: 407 XXXXXESIWGKPFKDELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVF 466
ESI+G FKDE N H+G G++SMAN+G +TNGSQFFI + L+ KH VF
Sbjct: 79 NGTGGESIYGSKFKDE-NFIKKHTGPGILSMANAGANTNGSQFFICTEKTSWLDGKHVVF 137
Query: 467 XXXXXXXXXXXXMEKVPVD 485
+EKV D
Sbjct: 138 GQVVEGLNVVRDIEKVGSD 156
>AT3G62030.1 | Symbols: ROC4 | ROC4 (ROTAMASE CYP 4);
peptidyl-prolyl cis-trans isomerase |
chr3:22984683-22986114 FORWARD
Length = 260
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/143 (37%), Positives = 73/143 (51%), Gaps = 5/143 (3%)
Query: 358 GELNIELHCDIAPRACENFITLC--ERGY-YNGVAFHRSIRNFMIQXXXXXXXXXXXE-S 413
G + + L ++ P+ ENF LC E+ Y Y G +FHR I++FMIQ S
Sbjct: 109 GRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIKDFMIQGGDFTEGNGTGGIS 168
Query: 414 IWGKPFKDELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVFXXXXXXX 473
I+G F+DE N L H+G G++SMAN+GP+TNGSQFFI L+ KH VF
Sbjct: 169 IYGAKFEDE-NFTLKHTGPGILSMANAGPNTNGSQFFICTVKTSWLDNKHVVFGQVIEGM 227
Query: 474 XXXXXMEKVPVDDDDRPLDEIKI 496
+E D P +I
Sbjct: 228 KLVRTLESQETRAFDVPKKGCRI 250
>AT3G55920.1 | Symbols: | peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative |
chr3:20754508-20756028 REVERSE
Length = 228
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 66/120 (55%), Gaps = 12/120 (10%)
Query: 358 GELNIELHCDIAPRACENFITLC--ERG--------YYNGVAFHRSIRNFMIQXXX-XXX 406
G + I L +I P+ ENF +LC E+G Y+ G +FHR I FMIQ
Sbjct: 73 GRILIGLFGNIVPKTAENFRSLCTGEKGVGNMGKPLYFKGSSFHRIIPGFMIQGGDFTRG 132
Query: 407 XXXXXESIWGKPFKDELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVF 466
ESI+G F DE N KL H+G G +SMANSGP +NGSQFFI + L+ H VF
Sbjct: 133 DGRGGESIYGDKFADE-NFKLKHTGPGFLSMANSGPDSNGSQFFITTVTTSWLDGHHVVF 191
>AT4G38740.1 | Symbols: ROC1 | ROC1 (rotamase CyP 1);
peptidyl-prolyl cis-trans isomerase |
chr4:18083614-18084132 REVERSE
Length = 172
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 70/136 (51%), Gaps = 12/136 (8%)
Query: 358 GELNIELHCDIAPRACENFITLC--ERG--------YYNGVAFHRSIRNFMIQXXX-XXX 406
G + +EL+ D PR ENF LC E+G ++ G FHR I NFM Q
Sbjct: 18 GRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKFHRVIPNFMCQGGDFTAG 77
Query: 407 XXXXXESIWGKPFKDELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVF 466
ESI+G F+DE N + H+G G++SMAN+G +TNGSQFFI L+ KH VF
Sbjct: 78 NGTGGESIYGSKFEDE-NFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVF 136
Query: 467 XXXXXXXXXXXXMEKV 482
+EKV
Sbjct: 137 GQVVEGLDVVKAIEKV 152
>AT2G29960.1 | Symbols: ATCYP5, CYP19-4, CYP5 | CYP5 (cyclophilin
5); peptidyl-prolyl cis-trans isomerase |
chr2:12776260-12777605 REVERSE
Length = 201
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 65/120 (54%), Gaps = 12/120 (10%)
Query: 358 GELNIELHCDIAPRACENFITLC--ERG--------YYNGVAFHRSIRNFMIQXXX-XXX 406
G + I L P+ ENF LC E+G +Y G FHR I +FMIQ
Sbjct: 46 GRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDFTHG 105
Query: 407 XXXXXESIWGKPFKDELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVF 466
ESI+G+ F DE N KL H+G GV+SMANSG TNGSQFFI + L+ +H VF
Sbjct: 106 NGMGGESIYGQKFADE-NFKLKHTGPGVLSMANSGEDTNGSQFFITTVTTSWLDGRHVVF 164
>AT2G21130.1 | Symbols: | peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase | chr2:9062700-9063224
REVERSE
Length = 174
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 72/136 (52%), Gaps = 12/136 (8%)
Query: 358 GELNIELHCDIAPRACENFITLC--ERG--------YYNGVAFHRSIRNFMIQXXX-XXX 406
G++ +EL+ D P+ ENF LC E+G ++ G +FHR I NFM Q
Sbjct: 19 GKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFHRVIPNFMCQGGDFTKG 78
Query: 407 XXXXXESIWGKPFKDELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVF 466
ESI+G F+DE N + H+G G++SMAN+G +TNGSQFFI L+ KH VF
Sbjct: 79 NGTGGESIYGAKFEDE-NFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVF 137
Query: 467 XXXXXXXXXXXXMEKV 482
+EK+
Sbjct: 138 GQVVEGLDVVKAIEKI 153
>AT2G38730.1 | Symbols: | peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative |
chr2:16199657-16201116 REVERSE
Length = 199
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Query: 358 GELNIELHCDIAPRACENFITLCERGY--------YNGVAFHRSIRNFMIQXXX-XXXXX 408
G + +EL DIAP+ ENF C Y FHR I++FM+Q
Sbjct: 46 GRIKMELFADIAPKTAENFRQFCTGELRKAGKPLGYKECQFHRVIKDFMVQSGDFLKNDG 105
Query: 409 XXXESIWGKPFKDELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVFXX 468
SI+G F+DE N H+G G++SMANSGP+TNG QFFI L+ KH VF
Sbjct: 106 SGCMSIYGHKFEDE-NFTAKHTGPGLLSMANSGPNTNGCQFFITCAKCDWLDNKHVVFGR 164
Query: 469 XXX-XXXXXXXMEKVPVDDDDRPLDEIKIT 497
+E V + ++RP + IT
Sbjct: 165 VLGDGLLVMRKIENVAIGPNNRPKLAVVIT 194
>AT5G58710.1 | Symbols: ROC7 | ROC7 (rotamase CyP 7);
peptidyl-prolyl cis-trans isomerase |
chr5:23735066-23736721 FORWARD
Length = 204
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 65/120 (54%), Gaps = 12/120 (10%)
Query: 358 GELNIELHCDIAPRACENFITLC--ERG--------YYNGVAFHRSIRNFMIQXXX-XXX 406
G + + L P+ ENF LC E+G +Y G +FHR I +FM+Q
Sbjct: 49 GRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRIIPSFMLQGGDFTHG 108
Query: 407 XXXXXESIWGKPFKDELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVF 466
ESI+G+ F DE N KL H+G G +SMAN+G TNGSQFFI + L+ +H VF
Sbjct: 109 NGMGGESIYGEKFADE-NFKLKHTGPGFLSMANAGQDTNGSQFFITTVTTSWLDGRHVVF 167
>AT4G34960.1 | Symbols: | peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative |
chr4:16648870-16650651 FORWARD
Length = 224
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 63/120 (52%), Gaps = 12/120 (10%)
Query: 358 GELNIELHCDIAPRACENFITLC--ERG--------YYNGVAFHRSIRNFMIQXXXXX-X 406
G + I L+ + P+ ENF LC E+G +Y G FHR I F+IQ
Sbjct: 61 GRIVIGLYGTVVPKTVENFRALCTGEKGKTSSGKPLHYKGTPFHRIISGFVIQGGDIIHG 120
Query: 407 XXXXXESIWGKPFKDELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVF 466
+SI+G F DE N K+ HS G+V+MAN+GP +NGSQFFI A L +H V
Sbjct: 121 DGKSSDSIYGGTFPDE-NFKIQHSHAGMVAMANTGPDSNGSQFFITTVKASWLEGEHVVL 179
>AT2G16600.2 | Symbols: ROC3 | ROC3 (rotamase CyP 3) |
chr2:7207944-7208465 FORWARD
Length = 151
Score = 72.8 bits (177), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 61/132 (46%), Gaps = 16/132 (12%)
Query: 356 THGELNIELHCDIAPRACENFITLC--ERGYYNGVAFHRSIRNFMIQXXXXXXXXXXXES 413
+ G + +EL+ D P ENF LC ERG Q ES
Sbjct: 17 SAGRIVMELYADTTPETAENFRALCTGERGIGK-------------QGDFTAGNGTGGES 63
Query: 414 IWGKPFKDELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVFXXXXXXX 473
I+G FKDE N H+G G++SMAN+G +TNGSQFFI + L+ KH VF
Sbjct: 64 IYGSKFKDE-NFIKKHTGPGILSMANAGANTNGSQFFICTEKTSWLDGKHVVFGQVVEGL 122
Query: 474 XXXXXMEKVPVD 485
+EKV D
Sbjct: 123 NVVRDIEKVGSD 134
>AT2G47320.1 | Symbols: | peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein | chr2:19434781-19435909
FORWARD
Length = 230
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 4/160 (2%)
Query: 343 KNPKKKGYVQLHTTHGELNIELHCDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQXX 402
KN + L T G + IEL D AP + F+ C+ GY+ G F R +++F+IQ
Sbjct: 72 KNVDLPRFATLDTGKGSVTIELFKDTAPNVVDQFMKFCQDGYFKGFLFSRVVKHFVIQAG 131
Query: 403 XXXXXXXXXESIWGKPFKDELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFK 462
+ W K+ +++ L H +V + G +FFI+ LN K
Sbjct: 132 DSAEFDAVKD--WALDRKN-IDTSLKHE-EFMVGTPKAKNEQGGFEFFIVSAQIKDLNEK 187
Query: 463 HTVFXXXXXXXXXXXXMEKVPVDDDDRPLDEIKITNVTIF 502
TVF +E+V DD +P I+I +VT+
Sbjct: 188 LTVFGRVSKGQDVVQEIEEVETDDQYQPKSPIEIMSVTLL 227
>AT2G29960.2 | Symbols: ATCYP5, CYP19-4, CYP5 | CYP5 (cyclophilin 5)
| chr2:12776260-12777605 REVERSE
Length = 191
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 57/120 (47%), Gaps = 22/120 (18%)
Query: 358 GELNIELHCDIAPRACENFITLC--ERG--------YYNGVAFHRSIRNFMIQXXX-XXX 406
G + I L P+ ENF LC E+G +Y G FHR I +FMIQ
Sbjct: 46 GRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRIIPSFMIQGGDFTHG 105
Query: 407 XXXXXESIWGKPFKDELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVF 466
ESI+G+ F DE N KL H+G P TNGSQFFI + L+ +H VF
Sbjct: 106 NGMGGESIYGQKFADE-NFKLKHTG----------PDTNGSQFFITTVTTSWLDGRHVVF 154
>AT3G66654.2 | Symbols: | peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein | chr3:2088700-2090303
FORWARD
Length = 236
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 349 GYVQLHTTHGELNIELHCDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQXXXXXXXX 408
G+ ++T+ G + +EL + +P + F+ LC++ ++ G+ F R I+N+++Q
Sbjct: 81 GFADINTSKGLITVELFKEGSPEVVDKFLDLCQKDHFKGMPFQRVIKNYLVQAGHSPSSI 140
Query: 409 XXXESIWGKPFKDELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSA--PHLNFKHTVF 466
E + L+ H + + N G N F +L +A P LN + VF
Sbjct: 141 PVEEWTAKGKLRGRLHIGPKHEAFMLGTPKNKG---NNKDFELLITTAPIPDLNDQLIVF 197
Query: 467 XXXXXXXXXXXXMEKVPVDDDDRPLDEIKITNVTI 501
+E+V D+ +P I IT V +
Sbjct: 198 GRVLKGEDVVQEIEEVDTDEHFQPKSPIGITGVVL 232
>AT3G66654.3 | Symbols: | peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein | chr3:2088700-2090303
FORWARD
Length = 236
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 349 GYVQLHTTHGELNIELHCDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQXXXXXXXX 408
G+ ++T+ G + +EL + +P + F+ LC++ ++ G+ F R I+N+++Q
Sbjct: 81 GFADINTSKGLITVELFKEGSPEVVDKFLDLCQKDHFKGMPFQRVIKNYLVQAGHSPSSI 140
Query: 409 XXXESIWGKPFKDELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSA--PHLNFKHTVF 466
E + L+ H + + N G N F +L +A P LN + VF
Sbjct: 141 PVEEWTAKGKLRGRLHIGPKHEAFMLGTPKNKG---NNKDFELLITTAPIPDLNDQLIVF 197
Query: 467 XXXXXXXXXXXXMEKVPVDDDDRPLDEIKITNVTI 501
+E+V D+ +P I IT V +
Sbjct: 198 GRVLKGEDVVQEIEEVDTDEHFQPKSPIGITGVVL 232
>AT3G66654.1 | Symbols: | peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein | chr3:2088700-2090303
FORWARD
Length = 236
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 68/155 (43%), Gaps = 5/155 (3%)
Query: 349 GYVQLHTTHGELNIELHCDIAPRACENFITLCERGYYNGVAFHRSIRNFMIQXXXXXXXX 408
G+ ++T+ G + +EL + +P + F+ LC++ ++ G+ F R I+N+++Q
Sbjct: 81 GFADINTSKGLITVELFKEGSPEVVDKFLDLCQKDHFKGMPFQRVIKNYLVQAGHSPSSI 140
Query: 409 XXXESIWGKPFKDELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSA--PHLNFKHTVF 466
E + L+ H + + N G N F +L +A P LN + VF
Sbjct: 141 PVEEWTAKGKLRGRLHIGPKHEAFMLGTPKNKG---NNKDFELLITTAPIPDLNDQLIVF 197
Query: 467 XXXXXXXXXXXXMEKVPVDDDDRPLDEIKITNVTI 501
+E+V D+ +P I IT V +
Sbjct: 198 GRVLKGEDVVQEIEEVDTDEHFQPKSPIGITGVVL 232
>AT4G32420.1 | Symbols: | peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein | chr4:15647556-15652109
REVERSE
Length = 837
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 65/146 (44%), Gaps = 14/146 (9%)
Query: 363 ELHCDIAPRACENFITLC--ERG---------YYNGVAFHRSIRNFMIQXXX-XXXXXXX 410
EL ++AP+ ENF LC E+G +Y G FHR ++ Q
Sbjct: 26 ELFPEVAPKTSENFRALCTGEKGIGPRSGKPLHYKGSFFHRIMKGSSAQAGDFVNRNGTA 85
Query: 411 XESIWGKPFKDELNSKLVHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVFXXXX 470
ESI+ F DE + KL H G++SM+ + GS F I ++ L+ + VF
Sbjct: 86 GESIYAGKFPDE-SPKLRHEETGLLSMSIADRDKFGSHFHITFRPNQQLDRNNVVFGKLI 144
Query: 471 XXXXXXXXMEKVPVDDDDRPLDEIKI 496
+E+V D++ +P +KI
Sbjct: 145 QGKEILKKIERV-GDEEGKPTVSVKI 169