Miyakogusa Predicted Gene
- chr2.CM0153.40.nc
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr2.CM0153.40.nc - phase: 0
(782 letters)
Database: TAIR8_pep
32,825 sequences; 13,166,001 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G13350.2 | Symbols: | human Rev interacting-like protein-rel... 356 3e-98
AT4G13350.1 | Symbols: | human Rev interacting-like protein-rel... 356 3e-98
AT1G08680.2 | Symbols: AGD14, ZIGA4 | ZIGA4 (ARF GAP-LIKE ZINC F... 229 7e-60
AT1G08680.1 | Symbols: AGD14, ZIGA4 | ZIGA4 (ARF GAP-LIKE ZINC F... 229 7e-60
AT1G08680.3 | Symbols: AGD14, ZIGA4 | ZIGA4 (ARF GAP-LIKE ZINC F... 229 7e-60
AT4G32630.1 | Symbols: | ARF GTPase activator/ zinc ion binding... 223 4e-58
AT4G32630.2 | Symbols: | ARF GTPase activator/ zinc ion binding... 223 4e-58
AT5G54310.1 | Symbols: AGD5 | AGD5 (ARF-GAP DOMAIN 5); DNA bindi... 77 5e-14
AT3G17660.1 | Symbols: AGD15 | AGD15 (ARF-GAP DOMAIN 15); DNA bi... 65 2e-10
AT4G05330.1 | Symbols: AGD13 | AGD13 (ARF-GAP DOMAIN 13); ARF GT... 64 3e-10
AT4G21160.4 | Symbols: AGD12, ZAC | ZAC (ARF-GAP DOMAIN 12); ARF... 61 3e-09
AT4G21160.2 | Symbols: AGD12, ZAC | ZAC (ARF-GAP DOMAIN 12); ARF... 61 3e-09
AT4G21160.3 | Symbols: AGD12, ZAC | ZAC (ARF-GAP DOMAIN 12); ARF... 61 3e-09
AT4G21160.1 | Symbols: AGD12, ZAC | ZAC (ARF-GAP DOMAIN 12); ARF... 61 3e-09
AT2G35210.1 | Symbols: RPA, AGD10, MEE28 | AGD10/MEE28/RPA (MATE... 59 1e-08
AT3G53710.2 | Symbols: AGD6 | AGD6; DNA binding | chr3:19914708-... 58 2e-08
AT3G53710.1 | Symbols: AGD6 | AGD6; DNA binding | chr3:19914708-... 58 2e-08
AT2G35210.2 | Symbols: RPA, AGD10, MEE28 | AGD10/MEE28/RPA (MATE... 57 4e-08
AT2G37550.2 | Symbols: AGD7, ASP1 | ASP1 (PDE1 SUPPRESSOR 1); DN... 57 6e-08
AT2G37550.1 | Symbols: AGD7, ASP1 | ASP1 (PDE1 SUPPRESSOR 1); DN... 57 6e-08
AT3G07940.1 | Symbols: | zinc finger and C2 domain protein, put... 55 1e-07
AT4G17890.2 | Symbols: AGD8 | AGD8 (ARF-GAP DOMAIN 8); DNA bindi... 53 1e-06
AT4G17890.1 | Symbols: AGD8 | AGD8 (ARF-GAP DOMAIN 8); DNA bindi... 52 1e-06
AT5G46750.1 | Symbols: AGD8 | AGD8 (ARF-GAP DOMAIN 8); DNA bindi... 52 1e-06
>AT4G13350.2 | Symbols: | human Rev interacting-like
protein-related / hRIP protein-related |
chr4:7770166-7773317 REVERSE
Length = 602
Score = 356 bits (914), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 200/386 (51%), Positives = 235/386 (60%), Gaps = 35/386 (9%)
Query: 1 MASR-KEDEKNERVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREFTHR 59
MA R KEDEKNE++IR LLKL N+RCINCNSLGPQYVCT FWTFVCTNCSGIHREFTHR
Sbjct: 1 MAGRVKEDEKNEKIIRSLLKLPENKRCINCNSLGPQYVCTTFWTFVCTNCSGIHREFTHR 60
Query: 60 VKSISMAKFTSQEVIALQEGGNQRAKEIYFKEWDAQHQSSPDSNNVNRLRDFIKHVYVDR 119
VKSISMAKFTSQEV AL+EGGNQ AK+IYFK D Q QS PD +NV RLRDFI+HVYV++
Sbjct: 61 VKSISMAKFTSQEVTALKEGGNQHAKDIYFKGLDQQRQSVPDGSNVERLRDFIRHVYVNK 120
Query: 120 RYTGDKTSDKPPKVKAGDK-------DDSYENRRAEAYQGGSRSPPYEDTYEXXXXXXXX 172
RYT +K DK P +D Y+ R + G RSP +E
Sbjct: 121 RYTNEKNDDKSPSETRSSSGSRSPPYEDGYDRRYGDRSSPGGRSPGFETG---------- 170
Query: 173 XXXXXXXXXQESRQYGDYKRSPGRPPIINDWRREDRRTSDGDYKVESQSPERVKDLNSSS 232
SR + ++SP RP I+NDWRREDR + SQSPE+VKDL S+S
Sbjct: 171 -----------SRNAVNNRKSPARPEILNDWRREDRFGGRKTSEEGSQSPEQVKDLGSAS 219
Query: 233 PPVVRPVRDILGDNVVPLRISEPPKPNSGRAADGSSLTQRTASSGSLASSIQNTVEVKLE 292
PPV RPVR+ILGD+V+PLR+ EPPKP R D S+ + S SL S+ + EVKLE
Sbjct: 220 PPVARPVREILGDSVIPLRVGEPPKPPVSRNTDASAHAKSGTSLSSLMSTNEKPPEVKLE 279
Query: 293 TAKSLXXXXXXXXX-XXXXXXXXXXXXXXXXVMQPANSSGDNWASFDIASEAKAT----P 347
TA SL QP SS DNWASFD A A + P
Sbjct: 280 TALSLIDFDTDFETPAPSVAIQAPLSTTSQPAPQPTTSSNDNWASFDAAPSAPSLNVSQP 339
Query: 348 SPSNLNPLESVLSQLSVPASSPAHSS 373
PS N L+S+LSQL+V +S P +S
Sbjct: 340 PPSG-NTLDSLLSQLAVTSSVPGQAS 364
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/118 (53%), Positives = 71/118 (60%), Gaps = 19/118 (16%)
Query: 529 EIKPSGRIELPEDLFTFKYPSYPAPVRGWQMGHPHGMGISM-QYSNVVPVPSFPQPSKST 587
E+KPSGR ELP DLF YPSY APV GWQ G PH M M QY+N VP + PQP KS
Sbjct: 426 EVKPSGRSELPADLFAVNYPSYHAPVPGWQAGPPHAMHYGMQQYNNPVPYQNVPQPGKSM 485
Query: 588 NPFDVSSKPTPDQAPT---FPSMSSLQGALP--------------NVPSSGANHPSSL 628
NPFD S P P Q T FPSM+ LQGALP N+PS G+ HPS++
Sbjct: 486 NPFDFSPGP-PSQTQTENMFPSMAPLQGALPPSGMMPSQGVHNQFNIPSQGSAHPSAM 542
>AT4G13350.1 | Symbols: | human Rev interacting-like
protein-related / hRIP protein-related |
chr4:7770166-7773317 REVERSE
Length = 602
Score = 356 bits (914), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 200/386 (51%), Positives = 235/386 (60%), Gaps = 35/386 (9%)
Query: 1 MASR-KEDEKNERVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREFTHR 59
MA R KEDEKNE++IR LLKL N+RCINCNSLGPQYVCT FWTFVCTNCSGIHREFTHR
Sbjct: 1 MAGRVKEDEKNEKIIRSLLKLPENKRCINCNSLGPQYVCTTFWTFVCTNCSGIHREFTHR 60
Query: 60 VKSISMAKFTSQEVIALQEGGNQRAKEIYFKEWDAQHQSSPDSNNVNRLRDFIKHVYVDR 119
VKSISMAKFTSQEV AL+EGGNQ AK+IYFK D Q QS PD +NV RLRDFI+HVYV++
Sbjct: 61 VKSISMAKFTSQEVTALKEGGNQHAKDIYFKGLDQQRQSVPDGSNVERLRDFIRHVYVNK 120
Query: 120 RYTGDKTSDKPPKVKAGDK-------DDSYENRRAEAYQGGSRSPPYEDTYEXXXXXXXX 172
RYT +K DK P +D Y+ R + G RSP +E
Sbjct: 121 RYTNEKNDDKSPSETRSSSGSRSPPYEDGYDRRYGDRSSPGGRSPGFETG---------- 170
Query: 173 XXXXXXXXXQESRQYGDYKRSPGRPPIINDWRREDRRTSDGDYKVESQSPERVKDLNSSS 232
SR + ++SP RP I+NDWRREDR + SQSPE+VKDL S+S
Sbjct: 171 -----------SRNAVNNRKSPARPEILNDWRREDRFGGRKTSEEGSQSPEQVKDLGSAS 219
Query: 233 PPVVRPVRDILGDNVVPLRISEPPKPNSGRAADGSSLTQRTASSGSLASSIQNTVEVKLE 292
PPV RPVR+ILGD+V+PLR+ EPPKP R D S+ + S SL S+ + EVKLE
Sbjct: 220 PPVARPVREILGDSVIPLRVGEPPKPPVSRNTDASAHAKSGTSLSSLMSTNEKPPEVKLE 279
Query: 293 TAKSLXXXXXXXXX-XXXXXXXXXXXXXXXXVMQPANSSGDNWASFDIASEAKAT----P 347
TA SL QP SS DNWASFD A A + P
Sbjct: 280 TALSLIDFDTDFETPAPSVAIQAPLSTTSQPAPQPTTSSNDNWASFDAAPSAPSLNVSQP 339
Query: 348 SPSNLNPLESVLSQLSVPASSPAHSS 373
PS N L+S+LSQL+V +S P +S
Sbjct: 340 PPSG-NTLDSLLSQLAVTSSVPGQAS 364
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/118 (53%), Positives = 71/118 (60%), Gaps = 19/118 (16%)
Query: 529 EIKPSGRIELPEDLFTFKYPSYPAPVRGWQMGHPHGMGISM-QYSNVVPVPSFPQPSKST 587
E+KPSGR ELP DLF YPSY APV GWQ G PH M M QY+N VP + PQP KS
Sbjct: 426 EVKPSGRSELPADLFAVNYPSYHAPVPGWQAGPPHAMHYGMQQYNNPVPYQNVPQPGKSM 485
Query: 588 NPFDVSSKPTPDQAPT---FPSMSSLQGALP--------------NVPSSGANHPSSL 628
NPFD S P P Q T FPSM+ LQGALP N+PS G+ HPS++
Sbjct: 486 NPFDFSPGP-PSQTQTENMFPSMAPLQGALPPSGMMPSQGVHNQFNIPSQGSAHPSAM 542
>AT1G08680.2 | Symbols: AGD14, ZIGA4 | ZIGA4 (ARF GAP-LIKE ZINC
FINGER-CONTAINING PROTEIN ZIGA4); DNA binding |
chr1:2762823-2768390 FORWARD
Length = 648
Score = 229 bits (583), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 100/164 (60%), Positives = 123/164 (75%)
Query: 1 MASRKEDEKNERVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREFTHRV 60
M S++E+E+NE++IRGL+KL NRRCINCNSLGPQYVCT FWTFVC CSGIHREFTHRV
Sbjct: 2 MGSKREEERNEKIIRGLMKLPPNRRCINCNSLGPQYVCTTFWTFVCMACSGIHREFTHRV 61
Query: 61 KSISMAKFTSQEVIALQEGGNQRAKEIYFKEWDAQHQSSPDSNNVNRLRDFIKHVYVDRR 120
KS+SM+KFTS+EV LQ GGNQRA+EIY K WD Q Q P+++N R+R+FIK+VYV ++
Sbjct: 62 KSVSMSKFTSKEVEVLQNGGNQRAREIYLKNWDHQRQRLPENSNAERVREFIKNVYVQKK 121
Query: 121 YTGDKTSDKPPKVKAGDKDDSYENRRAEAYQGGSRSPPYEDTYE 164
Y G +DKP K RRA +Y S+SPPY+ YE
Sbjct: 122 YAGANDADKPSKDSQDHVSSEDMTRRANSYHSYSQSPPYDYQYE 165
>AT1G08680.1 | Symbols: AGD14, ZIGA4 | ZIGA4 (ARF GAP-LIKE ZINC
FINGER-CONTAINING PROTEIN ZIGA4); DNA binding |
chr1:2762823-2768390 FORWARD
Length = 649
Score = 229 bits (583), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 100/164 (60%), Positives = 123/164 (75%)
Query: 1 MASRKEDEKNERVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREFTHRV 60
M S++E+E+NE++IRGL+KL NRRCINCNSLGPQYVCT FWTFVC CSGIHREFTHRV
Sbjct: 2 MGSKREEERNEKIIRGLMKLPPNRRCINCNSLGPQYVCTTFWTFVCMACSGIHREFTHRV 61
Query: 61 KSISMAKFTSQEVIALQEGGNQRAKEIYFKEWDAQHQSSPDSNNVNRLRDFIKHVYVDRR 120
KS+SM+KFTS+EV LQ GGNQRA+EIY K WD Q Q P+++N R+R+FIK+VYV ++
Sbjct: 62 KSVSMSKFTSKEVEVLQNGGNQRAREIYLKNWDHQRQRLPENSNAERVREFIKNVYVQKK 121
Query: 121 YTGDKTSDKPPKVKAGDKDDSYENRRAEAYQGGSRSPPYEDTYE 164
Y G +DKP K RRA +Y S+SPPY+ YE
Sbjct: 122 YAGANDADKPSKDSQDHVSSEDMTRRANSYHSYSQSPPYDYQYE 165
>AT1G08680.3 | Symbols: AGD14, ZIGA4 | ZIGA4 (ARF GAP-LIKE ZINC
FINGER-CONTAINING PROTEIN ZIGA4); DNA binding |
chr1:2762823-2768390 FORWARD
Length = 607
Score = 229 bits (583), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 100/164 (60%), Positives = 123/164 (75%)
Query: 1 MASRKEDEKNERVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREFTHRV 60
M S++E+E+NE++IRGL+KL NRRCINCNSLGPQYVCT FWTFVC CSGIHREFTHRV
Sbjct: 2 MGSKREEERNEKIIRGLMKLPPNRRCINCNSLGPQYVCTTFWTFVCMACSGIHREFTHRV 61
Query: 61 KSISMAKFTSQEVIALQEGGNQRAKEIYFKEWDAQHQSSPDSNNVNRLRDFIKHVYVDRR 120
KS+SM+KFTS+EV LQ GGNQRA+EIY K WD Q Q P+++N R+R+FIK+VYV ++
Sbjct: 62 KSVSMSKFTSKEVEVLQNGGNQRAREIYLKNWDHQRQRLPENSNAERVREFIKNVYVQKK 121
Query: 121 YTGDKTSDKPPKVKAGDKDDSYENRRAEAYQGGSRSPPYEDTYE 164
Y G +DKP K RRA +Y S+SPPY+ YE
Sbjct: 122 YAGANDADKPSKDSQDHVSSEDMTRRANSYHSYSQSPPYDYQYE 165
>AT4G32630.1 | Symbols: | ARF GTPase activator/ zinc ion binding |
chr4:15738321-15741418 FORWARD
Length = 627
Score = 223 bits (568), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 121/281 (43%), Positives = 163/281 (58%), Gaps = 32/281 (11%)
Query: 5 KEDEKNERVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREFTHRVKSIS 64
KEDE+ E+ IR LLKL NRRCINCNSLGPQYVC+ FWTFVC NCSGIHREFTHRVKS+S
Sbjct: 2 KEDERTEKAIRSLLKLPENRRCINCNSLGPQYVCSTFWTFVCVNCSGIHREFTHRVKSVS 61
Query: 65 MAKFTSQEVIALQEGGNQRAKEIYFKEWDAQHQSSPDSNNVNRLRDFIKHVYVDRRYTGD 124
MAKFT+ EV AL+ GGN+RA++IYFKEWDA PD +N+ +LRDFI+ VYVD+RY+
Sbjct: 62 MAKFTADEVSALRAGGNERARQIYFKEWDAHRDGYPDRSNIFKLRDFIRSVYVDKRYS-- 119
Query: 125 KTSDKPPKVKAGDKDDSYENRRAEAYQGGSRSPPYEDTYEXXXXXXXXXXXXXXXXXQES 184
+SDK + K+ +D E+++ A+ GSRS + +
Sbjct: 120 -SSDKISQQKSDVTEDYRESKKTSAHVLGSRS-----LHSVDKSDIERSSAAGRSGSESL 173
Query: 185 RQYGDYK-----------------RSPGRPPIINDWRREDRRTSDGDYKVESQSPERVKD 227
R Y D K +SP R I++D R+D D + +S+ + D
Sbjct: 174 RFYFDDKNHKQQHVTHNPRSRGLPKSPIRFEIVDDRFRDDGSVKRYDARKDSRGSSKSLD 233
Query: 228 LNSS----SPPVVRPVRDILGDNVVPLRISEPPKPNSGRAA 264
L+S+ S P+VR ++ N+V + + P N A+
Sbjct: 234 LSSNKDMPSFPIVRHTSEL---NIVKVEKKKDPVNNQMTAS 271
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 52/94 (55%), Gaps = 7/94 (7%)
Query: 529 EIKPSGRIELPEDLFTFKYPSYPAPVRGWQMGHPHGMGISMQYSNV-VPVPSFPQPSKST 587
E + S R LPEDLFT + P V G HGMG MQY V + + +K+
Sbjct: 437 ETQSSIRKALPEDLFTGGFSFAPQQVHGQH----HGMGYGMQYYQYPVAMGALTYTAKAA 492
Query: 588 NPFDVSSKPT-PDQAPTFPSMSSLQ-GALPNVPS 619
NPFD+S T P+Q P FP+M+ +Q G LP+V S
Sbjct: 493 NPFDLSYDDTAPNQTPQFPTMAYVQGGGLPHVSS 526
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 63/153 (41%), Gaps = 7/153 (4%)
Query: 635 WTQPPSAQGALSSTPPSGTMHPLGLGNQSHAWTPPMPSLQ----GALPR-GPPSGTLHPS 689
+ Q P A GAL+ T + L + + TP P++ G LP P G S
Sbjct: 475 YYQYPVAMGALTYTAKAANPFDLSYDDTAPNQTPQFPTMAYVQGGGLPHVSSPIGYSDSS 534
Query: 690 SLGNASHAWTXXXXXXYVPVLPAQAQAHASAFGPSAYMGQQLPTNM-PMPRQDVGSYGIE 748
S S + L + A AS P A MGQQ NM P RQ+ G E
Sbjct: 535 SPAADSIGLMTSQSPFHATALSPNSPALASHLSPGALMGQQSQVNMSPSFRQEYSGLGTE 594
Query: 749 GDFFGLANPNQQPAGRFPITSPPNTFPAGGNPF 781
G+ F + Q +P ++ PN + + GNPF
Sbjct: 595 GNTFNGVHTFHQANNGYP-SANPNAYVSRGNPF 626
>AT4G32630.2 | Symbols: | ARF GTPase activator/ zinc ion binding |
chr4:15738321-15741418 FORWARD
Length = 628
Score = 223 bits (568), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 121/281 (43%), Positives = 163/281 (58%), Gaps = 32/281 (11%)
Query: 5 KEDEKNERVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREFTHRVKSIS 64
KEDE+ E+ IR LLKL NRRCINCNSLGPQYVC+ FWTFVC NCSGIHREFTHRVKS+S
Sbjct: 2 KEDERTEKAIRSLLKLPENRRCINCNSLGPQYVCSTFWTFVCVNCSGIHREFTHRVKSVS 61
Query: 65 MAKFTSQEVIALQEGGNQRAKEIYFKEWDAQHQSSPDSNNVNRLRDFIKHVYVDRRYTGD 124
MAKFT+ EV AL+ GGN+RA++IYFKEWDA PD +N+ +LRDFI+ VYVD+RY+
Sbjct: 62 MAKFTADEVSALRAGGNERARQIYFKEWDAHRDGYPDRSNIFKLRDFIRSVYVDKRYS-- 119
Query: 125 KTSDKPPKVKAGDKDDSYENRRAEAYQGGSRSPPYEDTYEXXXXXXXXXXXXXXXXXQES 184
+SDK + K+ +D E+++ A+ GSRS + +
Sbjct: 120 -SSDKISQQKSDVTEDYRESKKTSAHVLGSRS-----LHSVDKSDIERSSAAGRSGSESL 173
Query: 185 RQYGDYK-----------------RSPGRPPIINDWRREDRRTSDGDYKVESQSPERVKD 227
R Y D K +SP R I++D R+D D + +S+ + D
Sbjct: 174 RFYFDDKNHKQQHVTHNPRSRGLPKSPIRFEIVDDRFRDDGSVKRYDARKDSRGSSKSLD 233
Query: 228 LNSS----SPPVVRPVRDILGDNVVPLRISEPPKPNSGRAA 264
L+S+ S P+VR ++ N+V + + P N A+
Sbjct: 234 LSSNKDMPSFPIVRHTSEL---NIVKVEKKKDPVNNQMTAS 271
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 52/95 (54%), Gaps = 8/95 (8%)
Query: 529 EIKPSGRIELPEDLFTFKYPSYPAPVRGWQMGHPHGMGISMQYSN--VVPVPSFPQPSKS 586
E + S R LPEDLFT + P V G HGMG MQY V + + +K+
Sbjct: 437 ETQSSIRKALPEDLFTGGFSFAPQQVHGQH----HGMGYGMQYYQYPVQAMGALTYTAKA 492
Query: 587 TNPFDVSSKPT-PDQAPTFPSMSSLQ-GALPNVPS 619
NPFD+S T P+Q P FP+M+ +Q G LP+V S
Sbjct: 493 ANPFDLSYDDTAPNQTPQFPTMAYVQGGGLPHVSS 527
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 67/167 (40%), Gaps = 9/167 (5%)
Query: 621 GANHPSSLGNAPYAWTQPPSAQGALSSTPPSGTMHPLGLGNQSHAWTPPMPSLQ----GA 676
G +H G Y + P A GAL+ T + L + + TP P++ G
Sbjct: 464 GQHHGMGYGMQYYQY--PVQAMGALTYTAKAANPFDLSYDDTAPNQTPQFPTMAYVQGGG 521
Query: 677 LPR-GPPSGTLHPSSLGNASHAWTXXXXXXYVPVLPAQAQAHASAFGPSAYMGQQLPTNM 735
LP P G SS S + L + A AS P A MGQQ NM
Sbjct: 522 LPHVSSPIGYSDSSSPAADSIGLMTSQSPFHATALSPNSPALASHLSPGALMGQQSQVNM 581
Query: 736 -PMPRQDVGSYGIEGDFFGLANPNQQPAGRFPITSPPNTFPAGGNPF 781
P RQ+ G EG+ F + Q +P ++ PN + + GNPF
Sbjct: 582 SPSFRQEYSGLGTEGNTFNGVHTFHQANNGYP-SANPNAYVSRGNPF 627
>AT5G54310.1 | Symbols: AGD5 | AGD5 (ARF-GAP DOMAIN 5); DNA binding
| chr5:22074488-22078292 REVERSE
Length = 483
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 86/162 (53%), Gaps = 15/162 (9%)
Query: 2 ASRKEDEKNERVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREF---TH 58
S++ + ++ +++ GLLK NR C +C + GP++ N F+C CSGIHR
Sbjct: 7 VSKELNARHRKILEGLLKHPENRECADCKTKGPRWASVNLGIFICMQCSGIHRSLGVHIS 66
Query: 59 RVKSISMAKFTSQEVIALQEGGNQRAKEIYFKEWDAQHQSSPDSNNVNRLRDFIKHVYVD 118
+V+S ++ + ++V +Q GN +A W+A+ P+ + V + +FI+ Y +
Sbjct: 67 KVRSATLDTWLPEQVAFIQSMGNDKANSY----WEAEL--PPNYDRVG-IENFIRAKYEE 119
Query: 119 RRYT--GDKTSDKPPKVKAGDKDDSYENRRAEAYQGGSRSPP 158
+R+ G+K + PP+V+ ++ S E R Y+ G S P
Sbjct: 120 KRWVSRGEK-ARSPPRVEQ-ERRKSVE-RSGPGYEHGHSSSP 158
>AT3G17660.1 | Symbols: AGD15 | AGD15 (ARF-GAP DOMAIN 15); DNA
binding | chr3:6037723-6039098 FORWARD
Length = 232
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 14/127 (11%)
Query: 2 ASRKEDEKNERVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREF---TH 58
S++ + K+ +++ LLK NR C +C S P++ N F+C CSGIHR
Sbjct: 7 VSKELNAKHSKILEALLKHPDNRECADCRSKAPRWASVNLGIFICMQCSGIHRSLGVHIS 66
Query: 59 RVKSISMAKFTSQEVIALQEGGNQRAKEIYFKEWDAQH--QSSPDSNNVNRLRDFIKHVY 116
+V+SI++ + +V ++ GN + E Y++ QH +SS D+ FI+ Y
Sbjct: 67 QVRSITLDTWLPDQVAFMKSTGNAKGNE-YWESELPQHFERSSSDT--------FIRAKY 117
Query: 117 VDRRYTG 123
++R+
Sbjct: 118 SEKRWVS 124
>AT4G05330.1 | Symbols: AGD13 | AGD13 (ARF-GAP DOMAIN 13); ARF
GTPase activator/ zinc ion binding |
chr4:2720769-2722676 REVERSE
Length = 336
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 6/111 (5%)
Query: 11 ERVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREF-TH--RVKSISMAK 67
+R IR LL NR C +C + P++ N F+C C G+HR TH +V S+++ +
Sbjct: 15 KRRIRDLLNQPDNRVCADCGASDPKWASANIGVFICLKCCGVHRSLGTHISKVLSVTLDE 74
Query: 68 FTSQEVIALQE-GGNQRAKEIYFKEW-DAQHQSSPDSNNVNRLRDFIKHVY 116
++ +EV ++ E GGN A IY D + PD N+ R+R FI+ Y
Sbjct: 75 WSDEEVDSMIEIGGNASANSIYEAFLPDTCSKPGPDVNHDQRMR-FIRAKY 124
>AT4G21160.4 | Symbols: AGD12, ZAC | ZAC (ARF-GAP DOMAIN 12); ARF
GTPase activator | chr4:11284704-11286542 FORWARD
Length = 337
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 6/116 (5%)
Query: 11 ERVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREF---THRVKSISMAK 67
+R IR LL NR C +C + P++ N F+C C G+HR +V S+++ +
Sbjct: 15 KRRIRDLLTQSDNRVCADCGAPDPKWASANIGVFICLKCCGVHRSLGSHISKVLSVTLDE 74
Query: 68 FTSQEVIALQE-GGNQRAKEIYFKEW-DAQHQSSPDSNNVNRLRDFIKHVYVDRRY 121
++ +EV ++ E GGN A IY + + PD+++ R+R FI+ Y + +
Sbjct: 75 WSDEEVDSMIEIGGNASANSIYEAFIPEGSSKPGPDASHDQRMR-FIRSKYEHQEF 129
>AT4G21160.2 | Symbols: AGD12, ZAC | ZAC (ARF-GAP DOMAIN 12); ARF
GTPase activator | chr4:11284704-11286542 FORWARD
Length = 337
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 6/116 (5%)
Query: 11 ERVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREF---THRVKSISMAK 67
+R IR LL NR C +C + P++ N F+C C G+HR +V S+++ +
Sbjct: 15 KRRIRDLLTQSDNRVCADCGAPDPKWASANIGVFICLKCCGVHRSLGSHISKVLSVTLDE 74
Query: 68 FTSQEVIALQE-GGNQRAKEIYFKEW-DAQHQSSPDSNNVNRLRDFIKHVYVDRRY 121
++ +EV ++ E GGN A IY + + PD+++ R+R FI+ Y + +
Sbjct: 75 WSDEEVDSMIEIGGNASANSIYEAFIPEGSSKPGPDASHDQRMR-FIRSKYEHQEF 129
>AT4G21160.3 | Symbols: AGD12, ZAC | ZAC (ARF-GAP DOMAIN 12); ARF
GTPase activator | chr4:11284704-11286542 FORWARD
Length = 337
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 6/116 (5%)
Query: 11 ERVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREF---THRVKSISMAK 67
+R IR LL NR C +C + P++ N F+C C G+HR +V S+++ +
Sbjct: 15 KRRIRDLLTQSDNRVCADCGAPDPKWASANIGVFICLKCCGVHRSLGSHISKVLSVTLDE 74
Query: 68 FTSQEVIALQE-GGNQRAKEIYFKEW-DAQHQSSPDSNNVNRLRDFIKHVYVDRRY 121
++ +EV ++ E GGN A IY + + PD+++ R+R FI+ Y + +
Sbjct: 75 WSDEEVDSMIEIGGNASANSIYEAFIPEGSSKPGPDASHDQRMR-FIRSKYEHQEF 129
>AT4G21160.1 | Symbols: AGD12, ZAC | ZAC (ARF-GAP DOMAIN 12); ARF
GTPase activator | chr4:11284704-11286542 FORWARD
Length = 337
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 6/116 (5%)
Query: 11 ERVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREF---THRVKSISMAK 67
+R IR LL NR C +C + P++ N F+C C G+HR +V S+++ +
Sbjct: 15 KRRIRDLLTQSDNRVCADCGAPDPKWASANIGVFICLKCCGVHRSLGSHISKVLSVTLDE 74
Query: 68 FTSQEVIALQE-GGNQRAKEIYFKEW-DAQHQSSPDSNNVNRLRDFIKHVYVDRRY 121
++ +EV ++ E GGN A IY + + PD+++ R+R FI+ Y + +
Sbjct: 75 WSDEEVDSMIEIGGNASANSIYEAFIPEGSSKPGPDASHDQRMR-FIRSKYEHQEF 129
>AT2G35210.1 | Symbols: RPA, AGD10, MEE28 | AGD10/MEE28/RPA
(MATERNAL EFFECT EMBRYO ARREST 28); DNA binding |
chr2:14843285-14845025 FORWARD
Length = 395
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 1 MASRKEDEKNERVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREF---T 57
MAS ++K V + L N+ C +CN+ P + + F+C +CS +HR
Sbjct: 1 MASENLNDKIS-VFKKLKAKSDNKICFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHI 59
Query: 58 HRVKSISMAKFTSQEVIALQEGGNQRAKEIYFKEWDAQHQSSPDSNNVNRLRDFIKHV 115
V+S ++ ++S+++ + GGN RA +++FK++ ++ +R D K +
Sbjct: 60 SFVRSTNLDSWSSEQLKMMIYGGNNRA-QVFFKQYGWSDGGKTEAKYTSRAADLYKQI 116
>AT3G53710.2 | Symbols: AGD6 | AGD6; DNA binding |
chr3:19914708-19916397 REVERSE
Length = 459
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 12 RVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREF---THRVKSISMAKF 68
R +R L N+ C++C PQ+ ++ F+C CSG HR V+S++M +
Sbjct: 5 RQLRTLQSQPENKVCVDCAQKNPQWASVSYGIFMCLECSGKHRGLGVHISFVRSVTMDSW 64
Query: 69 TSQEVIALQEGGNQRAKEIYFKEWDAQHQSSPDSNNVNRLRDFIKHVYVDR 119
++ ++ ++ GGN+R + + AQ+ + +++ +++ VY DR
Sbjct: 65 SAIQIKKMEAGGNERLNKFF-----AQYGIAKETDIISKYNSNAASVYRDR 110
>AT3G53710.1 | Symbols: AGD6 | AGD6; DNA binding |
chr3:19914708-19916397 REVERSE
Length = 459
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 57/111 (51%), Gaps = 8/111 (7%)
Query: 12 RVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREF---THRVKSISMAKF 68
R +R L N+ C++C PQ+ ++ F+C CSG HR V+S++M +
Sbjct: 5 RQLRTLQSQPENKVCVDCAQKNPQWASVSYGIFMCLECSGKHRGLGVHISFVRSVTMDSW 64
Query: 69 TSQEVIALQEGGNQRAKEIYFKEWDAQHQSSPDSNNVNRLRDFIKHVYVDR 119
++ ++ ++ GGN+R + + AQ+ + +++ +++ VY DR
Sbjct: 65 SAIQIKKMEAGGNERLNKFF-----AQYGIAKETDIISKYNSNAASVYRDR 110
>AT2G35210.2 | Symbols: RPA, AGD10, MEE28 | AGD10/MEE28/RPA
(MATERNAL EFFECT EMBRYO ARREST 28); DNA binding |
chr2:14843285-14844963 FORWARD
Length = 371
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 1 MASRKEDEKNERVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREF---T 57
MAS ++K V + L N+ C +CN+ P + + F+C +CS +HR
Sbjct: 1 MASENLNDKIS-VFKKLKAKSDNKICFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHI 59
Query: 58 HRVKSISMAKFTSQEVIALQEGGNQRAKEIYFKEWDAQHQSSPDSNNVNRLRDFIKHV 115
V+S ++ ++S+++ + GGN RA +++FK++ ++ +R D K +
Sbjct: 60 SFVRSTNLDSWSSEQLKMMIYGGNNRA-QVFFKQYGWSDGGKTEAKYTSRAADLYKQI 116
>AT2G37550.2 | Symbols: AGD7, ASP1 | ASP1 (PDE1 SUPPRESSOR 1); DNA
binding | chr2:15762622-15764534 REVERSE
Length = 456
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 8/111 (7%)
Query: 12 RVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREF---THRVKSISMAKF 68
R +R L N+ C++C+ PQ+ ++ F+C CSG HR V+S++M +
Sbjct: 5 RRLRTLQSQPENKVCVDCSQKNPQWASISYGIFMCLECSGKHRGLGVHISFVRSVTMDSW 64
Query: 69 TSQEVIALQEGGNQRAKEIYFKEWDAQHQSSPDSNNVNRLRDFIKHVYVDR 119
+ ++ + GGN+R AQ+ S +++ +++ VY DR
Sbjct: 65 SEIQIKKMDAGGNERLNNFL-----AQYGISKETDIISKYNSNAASVYRDR 110
>AT2G37550.1 | Symbols: AGD7, ASP1 | ASP1 (PDE1 SUPPRESSOR 1); DNA
binding | chr2:15762622-15764534 REVERSE
Length = 456
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 8/111 (7%)
Query: 12 RVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREF---THRVKSISMAKF 68
R +R L N+ C++C+ PQ+ ++ F+C CSG HR V+S++M +
Sbjct: 5 RRLRTLQSQPENKVCVDCSQKNPQWASISYGIFMCLECSGKHRGLGVHISFVRSVTMDSW 64
Query: 69 TSQEVIALQEGGNQRAKEIYFKEWDAQHQSSPDSNNVNRLRDFIKHVYVDR 119
+ ++ + GGN+R AQ+ S +++ +++ VY DR
Sbjct: 65 SEIQIKKMDAGGNERLNNFL-----AQYGISKETDIISKYNSNAASVYRDR 110
>AT3G07940.1 | Symbols: | zinc finger and C2 domain protein,
putative | chr3:2529548-2531374 FORWARD
Length = 385
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 55/113 (48%), Gaps = 6/113 (5%)
Query: 14 IRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREF---THRVKSISMAKFTS 70
+ LLK N+ C +C S P++V + F+C CSG+HR +V S+ + ++T
Sbjct: 50 LEKLLKQPGNKYCADCGSPEPKWVSLSLGVFICIKCSGVHRSLGVHISKVLSVKLDEWTD 109
Query: 71 QEV-IALQEGGNQRAKEIYFK-EWDAQHQSSPDSNNVNRLRDFIKHVYVDRRY 121
+V + + GGN E + D + PDS N R DFI+ Y ++
Sbjct: 110 DQVDMLVGYGGNTAVNERFEACNIDQSKKPKPDSTNEER-NDFIRKKYEQHQF 161
>AT4G17890.2 | Symbols: AGD8 | AGD8 (ARF-GAP DOMAIN 8); DNA
binding | chr4:9937134-9939001 FORWARD
Length = 384
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 1 MASRKEDEKNER--VIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREF-- 56
MAS D ++ V R L N+ C +C++ P + + F+C +CS HR
Sbjct: 1 MASSSADNLTDKNIVFRKLKSKSENKVCFDCSAKNPTWASVTYGIFLCIDCSATHRNLGV 60
Query: 57 -THRVKSISMAKFTSQEVIALQEGGNQRAKEIYFKE 91
V+S ++ ++ +++ + GGN RA +++FK+
Sbjct: 61 HISFVRSTNLDSWSPEQLRTMMFGGNNRA-QVFFKQ 95
>AT4G17890.1 | Symbols: AGD8 | AGD8 (ARF-GAP DOMAIN 8); DNA
binding | chr4:9937134-9939159 FORWARD
Length = 413
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 1 MASRKEDEKNER--VIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREF-- 56
MAS D ++ V R L N+ C +C++ P + + F+C +CS HR
Sbjct: 1 MASSSADNLTDKNIVFRKLKSKSENKVCFDCSAKNPTWASVTYGIFLCIDCSATHRNLGV 60
Query: 57 -THRVKSISMAKFTSQEVIALQEGGNQRAKEIYFKE 91
V+S ++ ++ +++ + GGN RA +++FK+
Sbjct: 61 HISFVRSTNLDSWSPEQLRTMMFGGNNRA-QVFFKQ 95
>AT5G46750.1 | Symbols: AGD8 | AGD8 (ARF-GAP DOMAIN 8); DNA
binding | chr5:18987177-18989044 REVERSE
Length = 402
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 1 MASRKEDEKNERVIRGLLKLESNRRCINCNSLGPQYVCTNFWTFVCTNCSGIHREF---T 57
MA+ +KN V R L N+ C +C++ P + + F+C +CS +HR
Sbjct: 1 MATENLTDKN-VVFRKLKSKSENKVCFDCSAKNPTWASVPYGIFLCIDCSAVHRSLGVHI 59
Query: 58 HRVKSISMAKFTSQEVIALQEGGNQRAKEIYFKE 91
V+S ++ ++ +++ + GGN RA +++FK+
Sbjct: 60 SFVRSTNLDSWSPEQLRTMMFGGNNRA-QVFFKQ 92