Miyakogusa Predicted Gene
- chr2.CM0081.330.nc
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr2.CM0081.330.nc - phase: 0
(1158 letters)
Database: TAIR8_pep
32,825 sequences; 13,166,001 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G15020.1 | Symbols: | similar to unknown protein [Arabidopsi... 1104 0.0
AT3G01320.1 | Symbols: | similar to paired amphipathic helix re... 1050 0.0
AT1G24190.1 | Symbols: SIN3, ATSIN3 | ATSIN3/SIN3 (Arabidopsis t... 833 0.0
AT1G70060.1 | Symbols: | paired amphipathic helix repeat-contai... 820 0.0
AT1G10450.1 | Symbols: | paired amphipathic helix repeat-contai... 377 e-104
AT1G59890.1 | Symbols: | paired amphipathic helix repeat-contai... 375 e-104
AT1G24200.1 | Symbols: | paired amphipathic helix repeat-contai... 190 5e-48
AT1G70030.1 | Symbols: | paired amphipathic helix repeat-contai... 172 8e-43
AT5G15030.1 | Symbols: | paired amphipathic helix repeat-contai... 134 3e-31
AT1G24230.1 | Symbols: | paired amphipathic helix repeat-contai... 111 3e-24
AT5G35610.1 | Symbols: | paired amphipathic helix repeat-contai... 110 4e-24
AT1G24250.1 | Symbols: | paired amphipathic helix repeat-contai... 102 1e-21
AT4G12020.1 | Symbols: ATWRKY19, MAPKKK11, WRKY19 | WRKY19 (WRKY... 100 4e-21
AT4G12020.2 | Symbols: ATWRKY19, MAPKKK11, WRKY19 | WRKY19 (WRKY... 100 4e-21
AT1G23810.1 | Symbols: | paired amphipathic helix repeat-contai... 99 2e-20
AT1G27280.1 | Symbols: | paired amphipathic helix repeat-contai... 97 9e-20
AT1G24210.1 | Symbols: | paired amphipathic helix repeat-contai... 89 1e-17
AT1G27260.1 | Symbols: | paired amphipathic helix repeat-contai... 89 2e-17
AT5G15040.1 | Symbols: | paired amphipathic helix repeat-contai... 85 2e-16
AT1G27240.1 | Symbols: | paired amphipathic helix repeat-contai... 81 4e-15
AT1G27220.1 | Symbols: | paired amphipathic helix repeat-contai... 77 5e-14
AT1G27250.1 | Symbols: | paired amphipathic helix repeat-contai... 75 4e-13
AT1G27270.1 | Symbols: | paired amphipathic helix repeat-contai... 71 4e-12
AT1G24220.1 | Symbols: | paired amphipathic helix repeat-contai... 55 2e-07
AT3G24260.1 | Symbols: | similar to unknown protein [Arabidopsi... 50 6e-06
AT3G28870.1 | Symbols: | similar to unknown protein [Arabidopsi... 43 0.001
>AT5G15020.1 | Symbols: | similar to unknown protein [Arabidopsis
thaliana] (TAIR:AT3G01320.1); similar to paired
amphipathic helix repeat-containing protein [Arabidopsis
thaliana] (TAIR:AT1G70060.1); similar to ATSIN3/SIN3
(Arabidopsis thaliana sin3 homolog) [Arabidopsis
thaliana] (TAIR:AT1G24190.1); similar to unnamed protein
product [Vitis vinifera] (GB:CAO40976.1); similar to
hypothetical protein OsJ_000071 [Oryza sativa (japonica
cultivar-group)] (GB:EAZ10246.1); similar to unnamed
protein product [Vitis vinifera] (GB:CAO14871.1);
contains InterPro domain Histone deacetylase interacting
(InterPro:IPR013194); contains InterPro domain Paired
amphipathic helix; (InterPro:IPR003822) |
chr5:4859411-4865572 REVERSE
Length = 1367
Score = 1104 bits (2856), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 619/1201 (51%), Positives = 777/1201 (64%), Gaps = 119/1201 (9%)
Query: 1 MKRARDDIYSASASQFKRPFASSRGDSYGQSQVPXXXXXXXXXXXXXEATTSQKLTTNDA 60
MKR RDDIY A+ SQFKRP SSRG+SY QS +QKLTT+DA
Sbjct: 1 MKRIRDDIY-ATGSQFKRPLGSSRGESYEQSP------ITGGGSIGEGGINTQKLTTDDA 53
Query: 61 LSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHLIFGFNTFL 120
L+YLK+VK+MFQDQR+KYD+FLEVMKDFKAQ+TDT+GVI+RVKELFKGHN+LIFGFNTFL
Sbjct: 54 LTYLKEVKEMFQDQRDKYDMFLEVMKDFKAQKTDTSGVISRVKELFKGHNNLIFGFNTFL 113
Query: 121 PKGYEITLDEDEAPAKKTVEFEEAISFVNKIKKRFQSDEHVYKSFLDILNMYRKEHKDIG 180
PKG+EITLD+ EAP+KKTVEFEEAISFVNKIK RFQ +E VYKSFL+ILNMYRK++KDI
Sbjct: 114 PKGFEITLDDVEAPSKKTVEFEEAISFVNKIKTRFQHNELVYKSFLEILNMYRKDNKDIT 173
Query: 181 EVYSEVATLFKDHRDLLEEFTRFLPDTSAAPSTQHAPFGRNSLQRFNERNSMTPMMRQMQ 240
EVY+EV+TLF+DH DLLEEFTRFLPD S AP T+ A R+ QR+++R S P++R+M
Sbjct: 174 EVYNEVSTLFEDHSDLLEEFTRFLPD-SLAPHTE-AQLLRSQAQRYDDRGSGPPLVRRMF 231
Query: 241 VDKQRYRRDRLPSHDRDRDLSVEHPEMDDDKTMINLHXXXXXXXXXXXXXXXXXPDLDN- 299
++K R RR+R + DRD SV+ +++DDK+M+ +H D DN
Sbjct: 232 MEKDR-RRERTVASRGDRDHSVDRSDLNDDKSMVKMHRDQRKRV-----------DKDNR 279
Query: 300 ---SRDLTS--------QRFRDKKKTVKKAEG------------------MYGEAFSFCE 330
SRDL Q F +K+K+ ++ EG MY +AF FCE
Sbjct: 280 ERRSRDLEDGEAEQDNLQHFSEKRKSSRRMEGFEAYSGPASHSEKNNLKSMYNQAFLFCE 339
Query: 331 KVKEKLSSSDDYQTFLKCLNIFNNGIIKKNDLQNLVTDLLGKHSDLMDEFKDFLERCENI 390
KVKE+L S DDYQ FLKCLN+F+NGII++ DLQNLV+D+LGK DLMDEF F ERCE+I
Sbjct: 340 KVKERLCSQDDYQAFLKCLNMFSNGIIQRKDLQNLVSDVLGKFPDLMDEFNQFFERCESI 399
Query: 391 EGF--LAGVMSKKSLSTDAHLSRSSKLEDKDKDQKREMDGAKEKDRYKEKYMGKSIQELD 448
+GF LAGVMSKKSL ++ +LSRS K E+KD++ KR+++ AKEK+R K+KYMGKSIQELD
Sbjct: 400 DGFQHLAGVMSKKSLGSEENLSRSVKGEEKDREHKRDVEAAKEKERSKDKYMGKSIQELD 459
Query: 449 LSDCKRCTPSYRLLPSDYPIPTASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRKNQYEE 508
LSDC+RCTPSYRLLP DYPIP+ R + GA VLNDHWVSVTSGSEDYSFKHMR+NQYEE
Sbjct: 460 LSDCERCTPSYRLLPPDYPIPSVRHRQKSGAAVLNDHWVSVTSGSEDYSFKHMRRNQYEE 519
Query: 509 SLFRCXXXXXXXXXXXXSVSSASKRAEELYNNINENKISVEALSRIEDHFTVLNLRCIER 568
SLFRC SV SA+K AEEL N I + KIS E RIEDHFT LNLRCIER
Sbjct: 520 SLFRCEDDRFELDMLLESVGSAAKSAEELLNIIIDKKISFEGSFRIEDHFTALNLRCIER 579
Query: 569 LYGDHGLDVIDILRKNPTHALPVILTRLKQKQEEWNRCRSDFNKVWAEIYAKNHYKSLDH 628
LYGDHGLDV D++RKNP ALPVILTRLKQKQ+EW +CR FN VWA++YAKNHYKSLDH
Sbjct: 580 LYGDHGLDVTDLIRKNPAAALPVILTRLKQKQDEWTKCREGFNVVWADVYAKNHYKSLDH 639
Query: 629 RSFYFKQQDSKNLSTKSLVAXXXXXXXXXXXXDHIIQSIAAENRQPLIPHLEFEYSDGGI 688
RSFYFKQQDSKNLS K+LV+ D ++ SI+A RQP+IPHLE++Y D I
Sbjct: 640 RSFYFKQQDSKNLSAKALVSEVKDLKEKSQKEDDVVLSISAGYRQPIIPHLEYDYLDRAI 699
Query: 689 HEDLYKLVQYSCEEVFSSKELLNKIMRLWSTFLEPMLGVTSQSHGTERVEDRKAGHSSRN 748
HEDL+KLVQ+SCEE+ S+KE K+++LW+ FLE ML V ++ G++ VED R
Sbjct: 700 HEDLFKLVQFSCEEICSTKEQTGKVLKLWANFLELMLDVAPRAKGSDSVEDVVETQHQRA 759
Query: 749 FAASNVGGDGSPHRDSISTNSRLPKSDKNEVDGRVTEVKNIHRTSVAANDKENGSV---- 804
F + G+ + D+IS SR K N ++H +S + E G +
Sbjct: 760 FTS----GEANESSDAISLVSRQLKFATN---------GDVHASSGVSKHGETGLLNRDS 806
Query: 805 GGELVCRDDQLMDKGLKKVECSDKAGFSKQFAS---------DEQGVKNNPSIAIRGENS 855
G+ +D L +K + C++K ++ + DE+ ++ S EN+
Sbjct: 807 SGKENLKDGDLANKDV--ATCAEKPQKDQEIGNGAAKRSGDVDERVATSSSSFPSGVENN 864
Query: 856 LNRTNLDVSPGCVSAPSRPTDADDSVAKSQTVNLPLVEGGDIAAPVPVANGVLVENSKVK 915
+ S G S+P++A D V Q +G DI + + NG+ + SK
Sbjct: 865 NGKVGSRDSSGSRGILSKPSEAIDKVDSIQH-----TQGVDIGRIIVLGNGLQSDTSKAN 919
Query: 916 S-HEESSGPCKVEKEEGELSPNGDSEEDFVAYRDSNAQSMAKSKHNIERRKYESRDREEE 974
S ++ES GP K+EKEEGELSP GDSE++FV Y D ++ AK++H++
Sbjct: 920 SNYDESGGPSKIEKEEGELSPVGDSEDNFVVYEDRELKATAKTEHSV------------- 966
Query: 975 CGPETGGXXXXXXXXXXXXXXXXXGEDVSGSESAGDECFQXXX-XXXXXXXXXXXGKAES 1033
E G GED SG+ES GDEC Q GKAES
Sbjct: 967 ---EAEGENDEDADDEDGDDASEAGEDASGTESIGDECSQDDNGVEEEGEHDEIDGKAES 1023
Query: 1034 EGEAEGMCDAQGGGDSSSLPLSERFLSSVKPLTKHVSAVSFAEE-MKDSRVFYGNDDFYA 1092
EGEAEGM ++ D P SER L SVKPL+KH++A + +E KDSRVFYGNDDFY
Sbjct: 1024 EGEAEGM-ESHLIEDKGLFPSSERVLLSVKPLSKHIAAAALVDEKKKDSRVFYGNDDFYV 1082
Query: 1093 LFRLHQ------------ILYERILSAKINSMSAEMKWK-AKDASSPDPYSRYICSFSQL 1139
LFRLH+ ILYERILSAK +EMK + KD SPDPY+R++ + L
Sbjct: 1083 LFRLHRVSAIDSYDLLSHILYERILSAKTYCSGSEMKLRNTKDTCSPDPYARFMNALFSL 1142
Query: 1140 V 1140
+
Sbjct: 1143 L 1143
>AT3G01320.1 | Symbols: | similar to paired amphipathic helix
repeat-containing protein [Arabidopsis thaliana]
(TAIR:AT1G70060.1); similar to ATSIN3/SIN3 (Arabidopsis
thaliana sin3 homolog) [Arabidopsis thaliana]
(TAIR:AT1G24190.1); similar to unknown protein
[Arabidopsis thaliana] (TAIR:AT5G15020.1); similar to
unnamed protein product [Vitis vinifera] (GB:CAO40976.1);
similar to hypothetical protein OsJ_000071 [Oryza sativa
(japonica cultivar-group)] (GB:EAZ10246.1); similar to
unnamed protein product [Vitis vinifera] (GB:CAO14871.1);
contains InterPro domain Histone deacetylase interacting
(InterPro:IPR013194); contains InterPro domain Paired
amphipathic helix; (InterPro:IPR003822) |
chr3:106737-113204 FORWARD
Length = 1372
Score = 1050 bits (2715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 609/1198 (50%), Positives = 756/1198 (63%), Gaps = 113/1198 (9%)
Query: 1 MKRARDDIYSASASQFKRPFASSRGDSYGQSQVPXXXXXXXXXXXXXEATTSQKLTTNDA 60
MKR RDD+Y AS SQF+RP SSRG GQS V SQKLTTNDA
Sbjct: 1 MKRIRDDVY-ASGSQFRRPLGSSRGQLCGQSPVHGSGDTEEEEEGGSR-RVSQKLTTNDA 58
Query: 61 LSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHLIFGFNTFL 120
LSYL++VK+MFQDQREKYD FLEVMKDFKAQRTDT GVIARVKELFKGHN+LI+GFNTFL
Sbjct: 59 LSYLREVKEMFQDQREKYDRFLEVMKDFKAQRTDTGGVIARVKELFKGHNNLIYGFNTFL 118
Query: 121 PKGYEITL-DEDEAPAKKTVEFEEAISFVNKIKKRFQSDEHVYKSFLDILNMYRKEHKDI 179
PKGYEITL +ED+A KKTVEFE+AI+FVNKIK RF+ DEHVYKSFL+ILNMYRKE+K+I
Sbjct: 119 PKGYEITLIEEDDALPKKTVEFEQAINFVNKIKMRFKHDEHVYKSFLEILNMYRKENKEI 178
Query: 180 GEVYSEVATLFKDHRDLLEEFTRFLPDTSAAPSTQHAPFGRNSLQRFNERNSMTPMMRQM 239
EVY+EV+ LF+ H DLLE+FTRFLP ++ PS A R+ Q++++R S P++ QM
Sbjct: 179 KEVYNEVSILFQGHLDLLEQFTRFLP--ASLPSHSAAQHSRSQAQQYSDRGSDPPLLHQM 236
Query: 240 QVDKQRYRRDRLPSHDRDRDLSVEHPEMDDDKTMINLHXXXXXXXXXXXXXXXXXPDLDN 299
QV+K+R RR+R + D SVE +++DDKTM+ + DLD+
Sbjct: 237 QVEKER-RRERAVA--LRGDYSVERYDLNDDKTMVKIQREQRKRLDKENRARRGR-DLDD 292
Query: 300 --SRDLTSQRFRDKKKTVKKAEG------------------MYGEAFSFCEKVKEKLSSS 339
+ F +K+K+ ++AE MY +AF FCEKVK++L S
Sbjct: 293 REAGQDNLHHFPEKRKSSRRAEALEAYSGSASHSEKDNLKSMYKQAFVFCEKVKDRLCSQ 352
Query: 340 DDYQTFLKCLNIFNNGIIKKNDLQNLVTDLLGKHSDLMDEFKDFLERCENI-EGF--LAG 396
DDYQTFLKCLNIF+NGII++ DLQNLV+DLLGK DLMDEF F ERCE+I +GF LAG
Sbjct: 353 DDYQTFLKCLNIFSNGIIQRKDLQNLVSDLLGKFPDLMDEFNQFFERCESITDGFQRLAG 412
Query: 397 VMSKKSLSTDAHLSRSSKLEDKDKDQKREMDGAKEKDRYKEKYMGKSIQELDLSDCKRCT 456
VMSKK S++ LSR K+E+K+ + K E++ KE ++ K++YMGKSIQELDLSDC+ CT
Sbjct: 413 VMSKKLFSSEEQLSRPMKVEEKESEHKPELEAVKETEQCKKEYMGKSIQELDLSDCECCT 472
Query: 457 PSYRLLPSDYPIPTASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCXXX 516
PSYRLLP+DYPIP ASQRSELGA+VLNDHWVSVTSGSEDYSFKHMR+NQYEESLFRC
Sbjct: 473 PSYRLLPADYPIPIASQRSELGAEVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDD 532
Query: 517 XXXXXXXXXSVSSASKRAEELYNNINENKISVEALSRIEDHFTVLNLRCIERLYGDHGLD 576
SVSSA++ AE L N I E KIS RIEDHFT LNLRCIERLYGDHGLD
Sbjct: 533 RFELDMLLESVSSAARSAESLLNIITEKKISFSGSFRIEDHFTALNLRCIERLYGDHGLD 592
Query: 577 VIDILRKNPTHALPVILTRLKQKQEEWNRCRSDFNKVWAEIYAKNHYKSLDHRSFYFKQQ 636
VIDIL KNP ALPVILTRLKQKQ EW +CR DF+KVWA +YAKNHYKSLDHRSFYFKQQ
Sbjct: 593 VIDILNKNPATALPVILTRLKQKQGEWKKCRDDFDKVWANVYAKNHYKSLDHRSFYFKQQ 652
Query: 637 DSKNLSTKSLVAXXXXXXXXXXXXDHIIQSIAAENRQPLIPHLEFEYSDGGIHEDLYKLV 696
DSKNLS KSL+A D ++ SI+A RQP+ P+LE+EY + IHED++K+V
Sbjct: 653 DSKNLSAKSLLAEIKELKEKSQNDDDVLLSISAGYRQPINPNLEYEYLNRAIHEDMFKVV 712
Query: 697 QYSCEEVFSSKELLNKIMRLWSTFLEPMLGVTSQSHGTERVED-------RKAGHSSRNF 749
Q+SCEE+ S+KE L+K++RLW FLE +LGV ++ GT+ VED HS+
Sbjct: 713 QFSCEELCSTKEQLSKVLRLWENFLEAVLGVPPRAKGTDLVEDVVINPKTLDVNHSTSPN 772
Query: 750 AASNVGGDGSPHRDSISTNSRLPKSDKNEVDGRVTEVKNIHRTSVAANDKENGSVG---- 805
+ V G D+ SR KS AAN EN S G
Sbjct: 773 GEAAVSSGG----DTARLASRKLKS--------------------AANGDENSSSGTFKH 808
Query: 806 GELVCRDDQLMDKGLKKVECSDKAG---------------------FSKQFASD--EQGV 842
G + D + L+ VE +++ G F K D E+
Sbjct: 809 GIGLLNKDSTGKENLEDVEIANRDGVACSAVKPQKEQETGNEAEKRFGKPIPMDISERAA 868
Query: 843 KNNPSIAIRGENSLNRTNLDVSPGCVSAPSRP----TDADDSVAKSQTVNLPLVEGGDIA 898
++ SI EN+ +V PG ++P TD V +TV+ +GGD+
Sbjct: 869 ISSISIPSGAENNHCVVGKEVLPGAHEIQAKPSDTLTDIHHDVDSIETVH--STQGGDVG 926
Query: 899 APVPVANGVLVENSK-VKSHEESSGPCKVEKEEGELSPNGDSEEDFVAYRDSNAQSMAKS 957
+ +ANG+ ++SK ++ ++ GP + EKEEGELSPNGD E++F Y+D +S +K
Sbjct: 927 NSIVLANGLRSDSSKGTRNSDDPEGPSRNEKEEGELSPNGDFEDNFGVYKDHGVKSTSKP 986
Query: 958 KHNIERRKYESRDREEECGPETGGXXXXXXXXXXXXXXXXXGEDVSGSESAGDECFQ-XX 1016
+++ E + E E + SG+ES GD C Q
Sbjct: 987 ENSAEAEVEADAEVENE--------------DDADDVDSENASEASGTESGGDVCSQDED 1032
Query: 1017 XXXXXXXXXXXXGKAESEGEAEGMCDAQGGGDSSSLPLSERFLSSVKPLTKHVSAVSFAE 1076
GKAESEGEAEGM G+S LP SER L SV+PL+KHV+AV E
Sbjct: 1033 REEENGEHDEIDGKAESEGEAEGMDPHLLEGESELLPQSERVLLSVRPLSKHVAAVLCDE 1092
Query: 1077 EMKDSRVFYGNDDFYALFRLHQILYERILSAKINSMSAEMKWK-AKDASSPDPYSRYI 1133
KD +VFYGNDDFY LFRLHQILYERIL AK N E+K K KD ++ DPY+R++
Sbjct: 1093 RTKDLQVFYGNDDFYVLFRLHQILYERILYAKRNCSGGELKSKNLKDTNAGDPYARFM 1150
>AT1G24190.1 | Symbols: SIN3, ATSIN3 | ATSIN3/SIN3 (Arabidopsis
thaliana sin3 homolog) | chr1:8563847-8569985 REVERSE
Length = 1353
Score = 833 bits (2152), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/1140 (44%), Positives = 681/1140 (59%), Gaps = 85/1140 (7%)
Query: 51 TSQKLTTNDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHN 110
++QKLTTNDAL+YLK VKD FQDQR KYD FLEVMK+FK+QR DTAGVI RVKELFKGH
Sbjct: 29 SAQKLTTNDALAYLKAVKDKFQDQRGKYDEFLEVMKNFKSQRVDTAGVITRVKELFKGHQ 88
Query: 111 HLIFGFNTFLPKGYEITL--DEDEAPAKKTVEFEEAISFVNKIKKRFQSDEHVYKSFLDI 168
LI GFNTFLPKG+EITL ++ + P KK VEFEEAISFVNKIK RFQ D+ VYKSFLDI
Sbjct: 89 ELILGFNTFLPKGFEITLQPEDGQPPLKKRVEFEEAISFVNKIKTRFQGDDRVYKSFLDI 148
Query: 169 LNMYRKEHKDIGEVYSEVATLFKDHRDLLEEFTRFLPDTSAA---PSTQHAPFGRNSLQR 225
LNMYR++ K I EVY EVA LF+DH DLL EFT FLPDTSA PS + + R
Sbjct: 149 LNMYRRDSKSITEVYQEVAILFRDHSDLLVEFTHFLPDTSATASIPSVKTSVRERGVSLA 208
Query: 226 FNERNSMTPM------MRQMQVDKQRYRRDRLPSHDRDRDLSVEHPEMDDDKTMINLHXX 279
+ +TP + D++R + H R + EH + D H
Sbjct: 209 DKKDRIITPHPDHDYGTEHIDQDRERPIKKENKEHMRGTNKENEHRDARD----FEPHSK 264
Query: 280 XXXXXXXXXXXXXXXPD---LDNSRDLTSQRFRDKKKTVKKAEGMYGEAFSFCEKVKEKL 336
D + N L+ K A Y + + ++VKEKL
Sbjct: 265 KEQFLNKKQKLHIRGDDPAEISNQSKLSGAVPSSSTYDEKGAMKSYSQDLAIVDRVKEKL 324
Query: 337 SSSDDYQTFLKCLNIFNNGIIKKNDLQNLVTDLLGKHSDLMDEFKDFLERCENIEGFLAG 396
++S+ YQ FL+CLN+F+ II + +LQ+LV +L+G + DLMD F +FL +CE EG L+G
Sbjct: 325 NASE-YQEFLRCLNLFSKEIISRPELQSLVGNLIGVYPDLMDSFIEFLVQCEKNEGLLSG 383
Query: 397 VMSKKS----LSTDAHLSRSSKLEDKDKDQKREMDGAKEKDRYKEKY--------MGKSI 444
+++K L + + S D+D++ KR+ DG +++D KE+ K I
Sbjct: 384 ILTKSKSTYLLQGEGKYPQPSLDNDRDQEHKRD-DGLRDRDHEKERLEKAAANLKWAKPI 442
Query: 445 QELDLSDCKRCTPSYRLLPSDYPIPTASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRKN 504
ELDLS+C++CTPSYRLLP +YPI ASQ++E+G VLNDHWVSVTSGSEDYSF HMRKN
Sbjct: 443 SELDLSNCEQCTPSYRLLPKNYPISIASQKTEIGKLVLNDHWVSVTSGSEDYSFSHMRKN 502
Query: 505 QYEESLFRCXXXXXXXXXXXXSVSSASKRAEELYNNINENKISVEALSRIEDHFTVLNLR 564
QYEESLF+C SV+S +K EEL IN N++ + R+EDH T LNLR
Sbjct: 503 QYEESLFKCEDDRFELDMLLESVNSTTKHVEELLTKINSNELKTNSPIRVEDHLTALNLR 562
Query: 565 CIERLYGDHGLDVIDILRKNPTHALPVILTRLKQKQEEWNRCRSDFNKVWAEIYAKNHYK 624
CIERLYGDHGLDV+D+L+KN + ALPVILTRLKQKQEEW RCRSDF+KVWAEIYAKN+YK
Sbjct: 563 CIERLYGDHGLDVMDVLKKNVSLALPVILTRLKQKQEEWARCRSDFDKVWAEIYAKNYYK 622
Query: 625 SLDHRSFYFKQQDSKNLSTKSLVAXXXXXXXXXXXXDHIIQSIAAENRQPLIPHLEFEYS 684
SLDHRSFYFKQQDSK LS K+L+A D ++ + AA NR + P LEF+Y
Sbjct: 623 SLDHRSFYFKQQDSKKLSMKALLAEIKEITEKKREDDSLL-AFAAGNRLSISPDLEFDYP 681
Query: 685 DGGIHEDLYKLVQYSCEEVFSSKELLNKIMRLWSTFLEPMLGVTSQSHGTERVED--RKA 742
D +HEDLY+L++YSC E+ S+ E L+K+M++W+TF+E + GV S+ G E ED +
Sbjct: 682 DHDLHEDLYQLIKYSCAEMCST-EQLDKVMKIWTTFVEQIFGVPSRPQGAEDQEDVVKSM 740
Query: 743 GHSSRNFAASNVGGDGSPHRDSISTNSRLPKSDKNEVDGRVTEVKNIHRTSVAANDKENG 802
+ ++ ++S +GSPH + +SR KS + + E + +TS N + +G
Sbjct: 741 NQNVKSGSSSAGESEGSPHNYASVADSRRSKSSR-----KANEHSQLGQTS---NSERDG 792
Query: 803 SVG--GELVCRDDQLMDKGLKKVECSDKAGFSKQFASDEQGVKNNPSIAIRGENSLNRTN 860
+ G + +C Q +K LK V SD+ SKQ S E+ + S A+ + L+++N
Sbjct: 793 AAGRTSDALCETAQ-HEKMLKNVVTSDEKPESKQAVSIERA---HDSTALAVDGLLDQSN 848
Query: 861 -----LDVSPGCVSAPSRPTDADDSVAKSQTVNLPLVEGGDIAAPVPVANGVLVENSKVK 915
+ ++ C + T + K N P +E G+ + NG+ VE +
Sbjct: 849 GGSSIVHMTGHCNNNLKPVTCGTELELKMNDGNGPKLEVGNKKL---LTNGIAVE---IT 902
Query: 916 SHEESSGPCKVEKEEGELSPNGDSEED-FVAYRDSNAQSMAKSKHNIERRKYESRDREEE 974
S +E +G KVE+EEGELSPNGD EED F Y ++ ++ +K+ + R RE E
Sbjct: 903 SDQEMAGTSKVEREEGELSPNGDFEEDNFAVYAKTDFETFSKANDSTGNNISGDRSREGE 962
Query: 975 -------CGPETGGXXXXXXXXXXXXXXXXXGEDVSGSESAGDECFQXXXXXXXXXXXXX 1027
+ G G DVSG+ES G E
Sbjct: 963 PSCLETRAENDAEGDENAARSSEDSRNEYENG-DVSGTESGGGE--------DPEDDLDN 1013
Query: 1028 XGKAESEGEAEGMCDAQGGGDS-SSLPLSERFLSSVKPLTKHV-SAVSFAEE----MKDS 1081
K ESEGEAE M DA ++ S+LP+S RFL VKPL K+V SA++ ++ +K+S
Sbjct: 1014 NNKGESEGEAECMADAHDAEENGSALPVSARFLLHVKPLVKYVPSAIALHDKDKDSLKNS 1073
Query: 1082 RVFYGNDDFYALFRLHQILYERILSAKINSMSAEMKWKAKDASSP-DPYSRYICSFSQLV 1140
+VFYGND FY LFRLH+ILYERILSAK+NS S E KW+ + +P D Y+R++ + L+
Sbjct: 1074 QVFYGNDSFYVLFRLHRILYERILSAKVNSSSPEGKWRTSNTKNPTDSYARFMTALYNLL 1133
>AT1G70060.1 | Symbols: | paired amphipathic helix repeat-containing
protein | chr1:26387452-26393231 FORWARD
Length = 1362
Score = 820 bits (2119), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/1195 (42%), Positives = 685/1195 (57%), Gaps = 169/1195 (14%)
Query: 49 ATTSQKLTTNDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKG 108
+++QKLTTNDAL+YLK VKD FQD+R+KYD FLEVMKDFKAQR DT GVI RVKELFKG
Sbjct: 4 GSSAQKLTTNDALAYLKAVKDKFQDKRDKYDEFLEVMKDFKAQRVDTTGVILRVKELFKG 63
Query: 109 HNHLIFGFNTFLPKGYEITL-DEDEAPA--KKTVEFEEAISFVNKIKKRFQSDEHVYKSF 165
+ LI GFNTFLPKG+EITL ED+ PA KK VEFEEAISFVNKIK RFQ D+ VYKSF
Sbjct: 64 NRELILGFNTFLPKGFEITLRPEDDQPAAPKKPVEFEEAISFVNKIKTRFQGDDRVYKSF 123
Query: 166 LDILNMYRKEHKDIGEVYSEVATLFKDHRDLLEEFTRFLPDTSAAPSTQHA---PFGRNS 222
LDILNMYRKE+K I EVY EVA LF+DH DLL EFT FLPDTSA ST + P
Sbjct: 124 LDILNMYRKENKSITEVYHEVAILFRDHHDLLGEFTHFLPDTSATASTNDSVKVPVRDRG 183
Query: 223 LQRFNERNSMTPMMRQMQVDKQRYRRDRLPSHDRDRDLSVEHPEMDDDKTMINLHXXXXX 282
++ P MRQ+ +DK +DR+ + +R L E+ ++D +++++
Sbjct: 184 IKSL-------PTMRQIDLDK----KDRIITSHPNRALKTENMDVDHERSLLK------- 225
Query: 283 XXXXXXXXXXXXPDLDNSRDLTSQR-----------FRDKKKTVKKA--------EGMYG 323
D + RD R F KKK ++K + G
Sbjct: 226 DSKEEVRRIDKKNDFMDDRDRKDYRGLDHDSHKEHFFNSKKKLIRKDDDSAEMSDQAREG 285
Query: 324 EAFS---------------------------FCEKVKEKLSSSDDYQTFLKCLNIFNNGI 356
+ FS F ++VK KL ++D+ Q FL+CLN+++ I
Sbjct: 286 DKFSGAIPSSSTYDEKGFIIDFLESHSQELAFVDRVKAKLDTADN-QEFLRCLNLYSKEI 344
Query: 357 IKKNDLQNLVTDLLGKHSDLMDEFKDFLERCENIEGFLAGVMSK---------------- 400
I + +LQ+LV+DL+G + DLMD FK FL +C+ +G L+G++SK
Sbjct: 345 ISQPELQSLVSDLIGVYPDLMDAFKVFLAQCDKNDGLLSGIVSKSKSSTFYNILLTYLFG 404
Query: 401 KSLSTDAHLSRSSKLEDKDKDQKRE-MDGAKEKDRYKEKY--------MGKSIQELDLSD 451
+SL ++ + +K DKD D++RE ++ +E+DR KE+ K I ELDLS+
Sbjct: 405 QSLWSEGKCPQPTKSLDKDTDREREKIERYRERDREKERLEKVAASQKWAKPISELDLSN 464
Query: 452 CKRCTPSYRLLPSDYPIPTASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRKNQYEESLF 511
C++CTPSYR LP +YPIP ASQ+ E+G+QVLNDHWVSVTSGSEDYSFKHMRKNQYEESLF
Sbjct: 465 CEQCTPSYRRLPKNYPIPIASQKMEIGSQVLNDHWVSVTSGSEDYSFKHMRKNQYEESLF 524
Query: 512 RCXXXXXXXXXXXXSVSSASKRAEELYNNINENKISVEALSRIEDHFTVLNLRCIERLYG 571
+C SV SA+ R EEL IN N++ + IEDH T LNLRCIERLY
Sbjct: 525 KCEDDRFELDMLLESVISATNRVEELLAKINSNELKTDTPICIEDHLTALNLRCIERLYS 584
Query: 572 DHGLDVIDILRKNPTHALPVILTRLKQKQEEWNRCRSDFNKVWAEIYAKNHYKSLDHRSF 631
DHGLDV+D+L+KN ALPVILTRLKQKQEEW RCR++FNKVWA+IY KN+++SLDHRSF
Sbjct: 585 DHGLDVLDLLKKNAYLALPVILTRLKQKQEEWARCRTEFNKVWADIYTKNYHRSLDHRSF 644
Query: 632 YFKQQDSKNLSTKSLVAXXXXXXXXXXXXDHIIQSIAAENRQPLIPHLEFEYSDGGIHED 691
YFKQQDSKNLSTK+L+A D + ++AA NR+ + ++ F+Y D +HED
Sbjct: 645 YFKQQDSKNLSTKALLAEIKEISEKKRGEDDALLALAAGNRRTISSNMSFDYPDPDLHED 704
Query: 692 LYKLVQYSCEEVFSSKELLNKIMRLWSTFLEPMLGVTSQSHGTERVEDRKAGHSSRNFAA 751
LY+L++YSC E+ S+ E L+K+M++W+ FLEP+ GV S+ G E ED A
Sbjct: 705 LYQLIKYSCGEMCST-EQLDKVMKVWTEFLEPIFGVPSRPQGAEDRED----------AV 753
Query: 752 SNVGGDGSPHRDSISTNSRLPKSDKNEVDG--RVTEVKNIHRTSVAANDKENGSVGGELV 809
+ D D++S + ++ +G +V E + + S D + L+
Sbjct: 754 KSTNHDREDQEDAVSPQNGASIANSMRSNGPRKVNESNQVRQASELDKDVTSSKTSDALL 813
Query: 810 CRDDQLMDKGLKKVECSDKAGFSKQFASDEQGVKNN--PSIAIRGENSLNRTNLDV---- 863
D+ DK K + D+ +KQ S E+ +N P + + + ++L V
Sbjct: 814 SCDNTQNDKMPKNLTTPDERAETKQAVSIERAHNSNALPLDGLLPQRNGKISSLSVADEE 873
Query: 864 -------SPGCVSAPSRPT-DADDSVAKSQTVNLPLVEGGDIAAPVPVANGVLVENSKVK 915
SPG ++ +P + K VN P VE GD PV + NG +
Sbjct: 874 WYPFLLYSPGLSNSNPKPALTSGTEELKPNYVNGPRVEIGD--NPV-IPNGTVA------ 924
Query: 916 SHEESSGPCKVEKEEGELSPNGDSEED-FVAYRDSNAQSMAKSKHNIERRKYESRDREEE 974
E +G KVE+EEGELSP GD EED + + +++ ++++KSK N S R +
Sbjct: 925 --EWFAGEAKVEREEGELSPTGDFEEDNYAVHGENDMEALSKSKENDATADDASAPRSSD 982
Query: 975 CGPETGGXXXXXXXXXXXXXXXXXGEDVSGSESA-GDECFQXXXXXXXXXXXXXXGKAES 1033
T DVSG++S G++C++ K ES
Sbjct: 983 GSGNTS-----------------HNGDVSGTDSGDGEDCYR--------EDDIDHNKVES 1017
Query: 1034 EGEA-EGMCDAQGG--GDSSSLPLSERFLSSVKPLTKHVSAVSFAEEMKDSR----VFYG 1086
EGEA EGM D GD L +S + L VKPL K+V + ++ DSR VFYG
Sbjct: 1018 EGEAEEGMSDGHDDTEGDMPVLSISVKNLLHVKPLAKYVPPALYDKDNDDSRKNSQVFYG 1077
Query: 1087 NDDFYALFRLHQILYERILSAKINSMSAEMKWKAKDASSP-DPYSRYICSFSQLV 1140
ND FY LFRLHQILY+RILSAKINS S + KWK + ++P D Y+R + + L+
Sbjct: 1078 NDSFYVLFRLHQILYDRILSAKINSSSPDRKWKTSNPTNPADSYARIMDALYNLL 1132
>AT1G10450.1 | Symbols: | paired amphipathic helix
repeat-containing protein | chr1:3432161-3437980 FORWARD
Length = 1173
Score = 377 bits (967), Expect = e-104, Method: Compositional matrix adjust.
Identities = 228/544 (41%), Positives = 292/544 (53%), Gaps = 83/544 (15%)
Query: 322 YGEAFSFCEKVKEKLSSSDD-YQTFLKCLNIFNNGIIKKNDLQNLVTDLLGKHSDLMDEF 380
+ +A F K+K + + Y+ FL LN++ +++ VT L H DL+ EF
Sbjct: 166 FKDAIGFVTKIKTRFGDDEHAYKRFLDILNLYRKEKKSISEVYEEVTMLFKGHEDLLMEF 225
Query: 381 KDFLERC-ENIEGFLAGVMSKKSLSTDAHLS-----RSSKLED----------------- 417
+FL C E+ V K +T A S + KLED
Sbjct: 226 VNFLPNCPESAPSTKNAVPRHKGTATTAMHSDKKRKQRCKLEDYSGHSDQREDGDENLVT 285
Query: 418 ----------------------------KDKDQKREMDGAKEKDRYKE--KYMGKSIQEL 447
D+ +K G+++ +K KY+G I EL
Sbjct: 286 CSADSPVGEGQPGYFRDYENREDTETDTADRTEKSAASGSQDIGNHKSTTKYVGTPINEL 345
Query: 448 DLSDCKRCTPSYRLLPSDYPIPTASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRKNQYE 507
DLS+C +CTPSYRLLP DY + S R+ LG + LNDH VSVTSGSEDYSF HMRKNQYE
Sbjct: 346 DLSECTQCTPSYRLLPKDYAVEIPSYRNTLGKKTLNDHLVSVTSGSEDYSFSHMRKNQYE 405
Query: 508 ESLFRCXXXXXXXXXXXXSVSSASKRAEELYNNINENKISVEALSRIEDHFTVLNLRCIE 567
ESLFRC SVSSA K+ E L +N N ISV++ IE H + +NLRCIE
Sbjct: 406 ESLFRCEDDRYEMDMLLGSVSSAIKQVEILLEKMNNNTISVDSTICIEKHLSAMNLRCIE 465
Query: 568 RLYGDHGLDVIDILRKNPTHALPVILTRLKQKQEEWNRCRSDFNKVWAEIYAKNHYKSLD 627
RLYGD+GLDV+D+L+KN ALPVILTRLKQKQEEW RC SDF KVWAE+YAKNH+KSLD
Sbjct: 466 RLYGDNGLDVMDLLKKNMHSALPVILTRLKQKQEEWARCHSDFQKVWAEVYAKNHHKSLD 525
Query: 628 HRSFYFKQQDSKNLSTKSLVAXXXXXXXXXXXXDHIIQSIAAENRQPLIPHLEFEYSDGG 687
HRSFYFKQQDSKNLSTK LVA D ++Q+IA P LEF Y D
Sbjct: 526 HRSFYFKQQDSKNLSTKCLVAEVKDISEKKHQED-LLQAIAVRVMPLFTPDLEFNYCDTQ 584
Query: 688 IHEDLYKLVQYSCEEVFSSKELLNKIMRLWSTFLEPMLGVTSQSHGTERVED-------- 739
IHEDLY L++Y CEE+ ++ E +K+M+LW TFLEP+ G+ S+S +ED
Sbjct: 585 IHEDLYLLIKYYCEEICAT-EQSDKVMKLWITFLEPIFGILSRSQDNLALEDVSKLKNNR 643
Query: 740 -----------------RKAGHSSRNFAASNVGGDGSPHRDSISTNSRL--PKSDKNEVD 780
RK S + + N GS R+ +S N ++ + DK + D
Sbjct: 644 ELQDACLAVKETASGSNRKHPISPKRLSKDNTKMQGSSSREDVSANIKVKTAQPDKLQDD 703
Query: 781 GRVT 784
+T
Sbjct: 704 AAMT 707
Score = 212 bits (540), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 114/217 (52%), Positives = 145/217 (66%), Gaps = 27/217 (12%)
Query: 1 MKRARDDIYSASASQFKRPFASSRGDSYGQSQVPXXXXXXXXXXXXXEATTSQKLTTNDA 60
MKRAR+D+++ + Q ++P SSRG++ +++P T DA
Sbjct: 52 MKRAREDVHTDT--QKRKPEVSSRGET---NKLPR---------------------TIDA 85
Query: 61 LSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHLIFGFNTFL 120
L+YLK VKD+F D +EKY+ FLE+MK+FKAQ DT GVI R+K LFKG+ L+ GFNTFL
Sbjct: 86 LTYLKAVKDIFHDNKEKYESFLELMKEFKAQTIDTNGVIERIKVLFKGYRDLLLGFNTFL 145
Query: 121 PKGYEITLDEDEAPAKKTVEFEEAISFVNKIKKRFQSDEHVYKSFLDILNMYRKEHKDIG 180
PKGY+ITL +E K V+F++AI FV KIK RF DEH YK FLDILN+YRKE K I
Sbjct: 146 PKGYKITLLPEEEKPKIRVDFKDAIGFVTKIKTRFGDDEHAYKRFLDILNLYRKEKKSIS 205
Query: 181 EVYSEVATLFKDHRDLLEEFTRFLPDT-SAAPSTQHA 216
EVY EV LFK H DLL EF FLP+ +APST++A
Sbjct: 206 EVYEEVTMLFKGHEDLLMEFVNFLPNCPESAPSTKNA 242
Score = 96.3 bits (238), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 66/109 (60%), Gaps = 6/109 (5%)
Query: 1035 GEAEGMCDAQGGGDSSSLPLSERFLSSVKPLTKHVSAVSFAEEM---KDSRVFYGNDDFY 1091
G G G+ S SERFL +VKP+ KH+S A E DS+VFYGND +Y
Sbjct: 841 GSVAGEMANGNQGEDGSFAFSERFLQTVKPVAKHLSWPLQASETCSQNDSQVFYGNDSYY 900
Query: 1092 ALFRLHQILYERILSAKINSMSAEMKWKAKDASSPDPYSRYICSFSQLV 1140
LFRLHQ+LYERI +AK +S E KWKA D ++PD Y R++ + L+
Sbjct: 901 VLFRLHQMLYERIQTAKKHS---EKKWKAADNTTPDSYPRFMDALYNLL 946
>AT1G59890.1 | Symbols: | paired amphipathic helix
repeat-containing protein | chr1:22047991-22054335
FORWARD
Length = 1159
Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust.
Identities = 218/501 (43%), Positives = 277/501 (55%), Gaps = 73/501 (14%)
Query: 325 AFSFCEKVKEKLSSSD-DYQTFLKCLNIFNNGIIKKNDLQNLVTDLLGKHSDLM------ 377
A F ++K + D Y+ FL LN++ N++ VT L H DL+
Sbjct: 130 AIEFVNRIKARFGGDDRAYKKFLDILNMYRKETKSINEVYQEVTLLFQDHEDLLGEFVHF 189
Query: 378 ---------------------------------------------DEFKDFLERCENIEG 392
DE+ + ++ E+ +
Sbjct: 190 LPDFRGSVSVNDPLFQRNTIPRDRNSTFPGMHPKHFEKKIKRSRHDEYTELSDQREDGDE 249
Query: 393 FLAGVMSKKSLSTDAHLSRSSKLEDKDKDQKREMDGAKEKD--------RYKEKYMGKSI 444
L S +SL+ K+ED + Q E +G E+D +M K+I
Sbjct: 250 NLVA-YSAESLANQGQWPGYPKVEDTEGIQIYESNGGHERDPDIGSQKNLLSTNHMAKAI 308
Query: 445 QELDLSDCKRCTPSYRLLPSDYPIPTASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRKN 504
ELDL+DC +CTPSYR LP DYPI S R+ LG +VLNDHWVSVTSGSEDYSFKHMRKN
Sbjct: 309 NELDLTDCAQCTPSYRRLPDDYPIQIPSYRNSLGEKVLNDHWVSVTSGSEDYSFKHMRKN 368
Query: 505 QYEESLFRCXXXXXXXXXXXXSVSSASKRAEELYNNINENKISVEALSRIEDHFTVLNLR 564
QYEESLFRC SVS+A KR E L IN N IS+E I +H L+ +
Sbjct: 369 QYEESLFRCEDDRFELDMLLESVSAAIKRVESLLEKINNNTISIETPICIREH---LSGK 425
Query: 565 CIERLYGDHGLDVIDILRKNPTHALPVILTRLKQKQEEWNRCRSDFNKVWAEIYAKNHYK 624
CIERLYGD+GLDV+D L+KN ALPVILTRLKQKQEEW RCR+DF KVWAE+YAKNH+K
Sbjct: 426 CIERLYGDYGLDVMDFLKKNSHIALPVILTRLKQKQEEWARCRADFRKVWAEVYAKNHHK 485
Query: 625 SLDHRSFYFKQQDSKNLSTKSLVAXXXXXXXXXXXXDHIIQSIAAENRQPLIPHLEFEYS 684
SLDHRSFYFKQQDSKNLSTK LVA D ++++IA + P +EF Y+
Sbjct: 486 SLDHRSFYFKQQDSKNLSTKGLVAEIKDISERKHKED-LLRAIAVGTKPSFTPDVEFIYT 544
Query: 685 DGGIHEDLYKLVQYSCEEVFSSKELLNKIMRLWSTFLEPMLGVTSQSHGTE------RVE 738
D +H DLYKL++Y CEE+ ++ E +K+M+LW TFLEPM GV S+S E ++E
Sbjct: 545 DTKVHTDLYKLIKYYCEEICAT-EQSDKVMKLWVTFLEPMFGVPSRSETIETMKDVAKIE 603
Query: 739 DRKAGHSSRNFAASNVGGDGS 759
D + H + N DGS
Sbjct: 604 DNQEHHDASEAVKENT-CDGS 623
Score = 233 bits (595), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 139/271 (51%), Positives = 172/271 (63%), Gaps = 22/271 (8%)
Query: 1 MKRARDDIYSASASQFKRPFASSRGDSYGQSQVPXXXXXXXXXXXXXEATTSQKLTTNDA 60
MKR R+++Y Q + P SSRG++ G+ T+ LTT DA
Sbjct: 1 MKRVREEVYVEP--QMRGPTVSSRGETNGRP------------STISGGGTTGGLTTVDA 46
Query: 61 LSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHLIFGFNTFL 120
L+YLK VKDMFQD +EKY+ FL VMKDFKAQR DT GVIARVK+LFKG++ L+ GFNTFL
Sbjct: 47 LTYLKAVKDMFQDNKEKYETFLGVMKDFKAQRVDTNGVIARVKDLFKGYDDLLLGFNTFL 106
Query: 121 PKGYEITLD-EDEAPAKKTVEFEEAISFVNKIKKRFQSDEHVYKSFLDILNMYRKEHKDI 179
PKGY+ITL EDE P KK V+F+ AI FVN+IK RF D+ YK FLDILNMYRKE K I
Sbjct: 107 PKGYKITLQPEDEKP-KKPVDFQVAIEFVNRIKARFGGDDRAYKKFLDILNMYRKETKSI 165
Query: 180 GEVYSEVATLFKDHRDLLEEFTRFLPDTSAAPSTQHAPFGRNSLQRFNERNSMTPMMRQM 239
EVY EV LF+DH DLL EF FLPD + S F RN++ R +RNS P M
Sbjct: 166 NEVYQEVTLLFQDHEDLLGEFVHFLPDFRGSVSVNDPLFQRNTIPR--DRNSTFPGMHPK 223
Query: 240 QVDKQRYRRDRLPSHDRDRDLSVEHPEMDDD 270
+K + +R R HD +LS + + D++
Sbjct: 224 HFEK-KIKRSR---HDEYTELSDQREDGDEN 250
Score = 127 bits (319), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 98/284 (34%), Positives = 135/284 (47%), Gaps = 17/284 (5%)
Query: 866 GCVSAPSRPTDADDSVAKSQTVNLPLVEGGDIAAP---VPVANGVLVENSKVKSH--EES 920
G A P + +S+ + + ++ + D + P V N +++E + +S + S
Sbjct: 646 GSSFAQDLPVNTGESIQQDKLHDVAAITNED-SQPSKLVSTRNDLIMEGVENRSRVSDVS 704
Query: 921 SGPCKVEKEEGELSPNGDSE-EDFVAYRDSNAQSMAKSKHNIERRKYESRDREEECGPET 979
G KVE+EEGELSP E E+F Y+++ + + K N E + +E CG E
Sbjct: 705 MGGHKVEREEGELSPTESCEQENFEVYKENGLEPVQKLPDN-EISNTDREPKEGACGTEA 763
Query: 980 GGXXXXXXXXXXXXXXXXXGEDVSGSESAGDECFQXXXXXXXXXXXXXXGKAESEGEAEG 1039
E G E+A AESE EA G
Sbjct: 764 VTRSNALPEDDDNKITQKLSE---GDENASKFIVSASKFGGQVSSDEEHKGAESENEAGG 820
Query: 1040 MCDAQGGGDSSSLPLSERFLSSVKPLTKHVSAVSFAEEM---KDSRVFYGNDDFYALFRL 1096
M ++ G D S SER+L VKPL KHV A E DSRVFYGND Y LFRL
Sbjct: 821 MVNSNEGEDGSFFTFSERYLQPVKPLAKHVPGTLQASECDTRNDSRVFYGNDSLYVLFRL 880
Query: 1097 HQILYERILSAKINSMSAEMKWKAKDASSPDPYSRYICSFSQLV 1140
HQ+LYERI SAKI+S E KWKA D++S D Y+R++ + L+
Sbjct: 881 HQMLYERIQSAKIHS---ERKWKAPDSTSTDSYTRFMEALYNLL 921
>AT1G24200.1 | Symbols: | paired amphipathic helix
repeat-containing protein | chr1:8571162-8572366 REVERSE
Length = 196
Score = 190 bits (482), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 117/175 (66%), Gaps = 4/175 (2%)
Query: 52 SQKLTTNDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNH 111
+ K TTNDAL YL+ VK FQ QREKYD FL++M D+K QR D +GVI R+KEL K
Sbjct: 7 AHKPTTNDALKYLRAVKAKFQGQREKYDEFLQIMIDYKTQRIDISGVIIRMKELLKEQQG 66
Query: 112 LIFGFNTFLPKGYEITLDEDEAPAKKTVEFEEAISFVNKIKKRFQSDEHVYKSFLDILNM 171
L+ GFN FLP GY IT E + KK VE EAISF+NKIK RFQ D+ VYKS LDILNM
Sbjct: 67 LLLGFNAFLPNGYMITHHE-QPSQKKPVELGEAISFINKIKTRFQGDDRVYKSVLDILNM 125
Query: 172 YRKEHKDIGEVYSEVATLFKDHRDLLEEFTRFLPDTSAAPSTQHAPFGRNSLQRF 226
YRK+ K I VY EVA LF DH +LL EFT FLP A P + + N + +F
Sbjct: 126 YRKDRKPITAVYREVAILFLDHNNLLVEFTHFLP---ATPDKGYRNYSTNKVTKF 177
>AT1G70030.1 | Symbols: | paired amphipathic helix
repeat-containing protein | chr1:26382881-26383854
FORWARD
Length = 160
Score = 172 bits (437), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 87/155 (56%), Positives = 113/155 (72%), Gaps = 2/155 (1%)
Query: 52 SQKLTTNDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNH 111
++KLTT DAL +L VK +QD RE YD FL +MKDF+ QR T VI++VKELFKG
Sbjct: 4 NKKLTTTDALDFLHLVKTKYQDNREIYDSFLTIMKDFRGQRAKTCDVISKVKELFKGQPE 63
Query: 112 LIFGFNTFLPKGYEITLDEDEAPAK-KTVEFEEAISFVNKIKKRFQSDEHVYKSFLDILN 170
L+ GFNTFLP G+EITL +DE + K F+EA FVNK+K RFQ+++ V+ SFL++L
Sbjct: 64 LLLGFNTFLPTGFEITLSDDELTSNSKFAHFDEAYEFVNKVKTRFQNND-VFNSFLEVLK 122
Query: 171 MYRKEHKDIGEVYSEVATLFKDHRDLLEEFTRFLP 205
++KE+K + E+Y EVA LF+ HRDLLEEF FLP
Sbjct: 123 THKKENKSVAELYQEVAILFQGHRDLLEEFHLFLP 157
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%)
Query: 135 AKKTVEFEEAISFVNKIKKRFQSDEHVYKSFLDILNMYRKEHKDIGEVYSEVATLFKDHR 194
A K + +A+ F++ +K ++Q + +Y SFL I+ +R + +V S+V LFK
Sbjct: 3 ANKKLTTTDALDFLHLVKTKYQDNREIYDSFLTIMKDFRGQRAKTCDVISKVKELFKGQP 62
Query: 195 DLLEEFTRFLP 205
+LL F FLP
Sbjct: 63 ELLLGFNTFLP 73
>AT5G15030.1 | Symbols: | paired amphipathic helix
repeat-containing protein | chr5:4866957-4869136 REVERSE
Length = 271
Score = 134 bits (337), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 70/132 (53%), Positives = 85/132 (64%), Gaps = 12/132 (9%)
Query: 1 MKRARDDIYSASASQFKRPFASSRGDSYGQSQVPXXXXXXXXXXXXXEATTSQKLTTNDA 60
MKR D S SQ + P S R + GQS P T LTT+DA
Sbjct: 150 MKRIGDKEIDGSGSQNQHPVGSPRNELQGQSPKPG------------NGNTKDALTTDDA 197
Query: 61 LSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHLIFGFNTFL 120
L+YLK++KD+F DQ+ KY LFLE+M DFKAQRTDT+ VIARVK+L KGHNHLI FN FL
Sbjct: 198 LAYLKEIKDVFHDQKYKYHLFLEIMSDFKAQRTDTSVVIARVKDLLKGHNHLILVFNKFL 257
Query: 121 PKGYEITLDEDE 132
P G+EITLD+++
Sbjct: 258 PHGFEITLDDED 269
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 89/182 (48%), Gaps = 30/182 (16%)
Query: 52 SQKLTTNDALSYLKQVKDMF--QDQREKYDLFLEVMKDFKAQ-----RTDTAGVIARVKE 104
S +T +DA +YL+QVK+ F D+R+KY +F +V+ DFKAQ R+D+A + +K+
Sbjct: 79 SLGMTISDARAYLQQVKNTFIDHDERDKYAMFRKVLFDFKAQRIVADRSDSARFCSHLKD 138
Query: 105 LFKGHNHLIF---------------GFNTFLPKGYEITLDEDEAP------AKKTVEFEE 143
L IF G P G + ++P K + ++
Sbjct: 139 LSDLFQ--IFSERMKRIGDKEIDGSGSQNQHPVGSPRNELQGQSPKPGNGNTKDALTTDD 196
Query: 144 AISFVNKIKKRFQSDEHVYKSFLDILNMYRKEHKDIGEVYSEVATLFKDHRDLLEEFTRF 203
A++++ +IK F ++ Y FL+I++ ++ + D V + V L K H L+ F +F
Sbjct: 197 ALAYLKEIKDVFHDQKYKYHLFLEIMSDFKAQRTDTSVVIARVKDLLKGHNHLILVFNKF 256
Query: 204 LP 205
LP
Sbjct: 257 LP 258
>AT1G24230.1 | Symbols: | paired amphipathic helix
repeat-containing protein | chr1:8584028-8585124 REVERSE
Length = 245
Score = 111 bits (277), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/165 (36%), Positives = 97/165 (58%), Gaps = 5/165 (3%)
Query: 54 KLTTNDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHLI 113
K T +D SY+ +K+ F+D+ KY FLE++ D+ A+R D +AR+ EL K H +L+
Sbjct: 81 KETFHDVRSYIYSLKESFRDEPAKYAQFLEILNDYSARRVDAPSAVARMTELMKDHRNLV 140
Query: 114 FGFNTFLPKG-YEITLDEDEAPAKKTVEFEEAISFVNKIKKRFQ-SDEHVYKSFLDILNM 171
GF+ L G + T E E K + +F++K+K RFQ +D HVY+SFL+IL M
Sbjct: 141 LGFSVLLSTGDTKTTPLEAEPDNNKRI---RVANFISKLKARFQGNDGHVYESFLEILTM 197
Query: 172 YRKEHKDIGEVYSEVATLFKDHRDLLEEFTRFLPDTSAAPSTQHA 216
Y++ +K + ++Y EV L + H DL+ EF+ T+ ++ A
Sbjct: 198 YQQGNKSVNDLYQEVVALLQGHEDLVMEFSNVFKRTTGPSGSKSA 242
Score = 93.6 bits (231), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/166 (35%), Positives = 86/166 (51%), Gaps = 16/166 (9%)
Query: 49 ATTSQKLTTNDALSYLKQVKDMF-QDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFK 107
+ S T ++A SY+ VK+ F DQ KY FL++M D +A R D A V+ R++EL K
Sbjct: 4 GSLSPAFTIDEATSYINAVKEAFGADQPAKYREFLDIMLDLRANRVDLATVVPRMRELLK 63
Query: 108 GHNHLIFGFNTFLPKGYEITLDEDEAPAKKTVEFEEAISFVNKIKKRFQSDEHVYKSFLD 167
H +L+ FN FLP A AK+T F + S++ +K+ F+ + Y FL+
Sbjct: 64 DHVNLLLRFNAFLP-----------AEAKET--FHDVRSYIYSLKESFRDEPAKYAQFLE 110
Query: 168 ILNMYRKEHKDIGEVYSEVATLFKDHRDLLEEFTRFLP--DTSAAP 211
ILN Y D + + L KDHR+L+ F+ L DT P
Sbjct: 111 ILNDYSARRVDAPSAVARMTELMKDHRNLVLGFSVLLSTGDTKTTP 156
>AT5G35610.1 | Symbols: | paired amphipathic helix
repeat-containing protein | chr5:13836736-13837523
REVERSE
Length = 155
Score = 110 bits (276), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 93/149 (62%), Gaps = 17/149 (11%)
Query: 51 TSQKLTTNDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHN 110
++ K+T ++ YLK VK+ Q++RE Y FL+VM + AQR D +GV + VKELFK
Sbjct: 2 SASKITKSNPRKYLKIVKNKLQNKREIYVRFLQVMTAYSAQRIDPSGVKSVVKELFKEDQ 61
Query: 111 HLIFGFNTFLPKGYE-----------ITLDEDEAPAKKTV--EFEEAISFVNKIKKRFQS 157
I GFNTFLPKG+E I L+ ++ P KK V E+ EA+ FV K+K
Sbjct: 62 EPISGFNTFLPKGFEIKPECDQNGFKIKLECEQTPPKKYVDIEYSEALDFVRKVK----D 117
Query: 158 DEHVYKSFLDILNMYRKEHKDIGEVYSEV 186
D+ +YKSF+ I++MY+K++K + EV EV
Sbjct: 118 DDRIYKSFVTIMDMYKKKNKSLDEVCREV 146
>AT1G24250.1 | Symbols: | paired amphipathic helix
repeat-containing protein | chr1:8588431-8589535 REVERSE
Length = 252
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/152 (40%), Positives = 80/152 (52%), Gaps = 22/152 (14%)
Query: 56 TTNDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHLIFG 115
T +DA SYL VK+ F D+ KY L+++KDFKA+R D A VIARV+EL K H +L+FG
Sbjct: 117 TIDDATSYLIAVKEAFHDEPAKYGEMLKLLKDFKARRVDAACVIARVEELMKDHLNLLFG 176
Query: 116 FNTFLPKGYEITLDEDEAPAKKTVEFEEAISFVNKIKKRFQSD-EHVYKSFLDILNMYRK 174
F FL SF K+K RFQ D V S L I+ MY +
Sbjct: 177 FCVFL---------------------SATTSFTTKLKARFQGDGSQVVDSVLQIMRMYGE 215
Query: 175 EHKDIGEVYSEVATLFKDHRDLLEEFTRFLPD 206
+K + Y EV L + H DL+ E ++ L D
Sbjct: 216 GNKSKHDAYQEVVALVQGHDDLVMELSQILTD 247
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 75/173 (43%), Gaps = 22/173 (12%)
Query: 59 DALSYLKQVKDMFQD-QREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHLIFGFN 117
D +Y+ V+ Q+ + ++ +F+ + + F A R AR+++L K H L G N
Sbjct: 14 DVKAYVNAVEVALQEMEPARFGMFVRLFRGFTAPRIGMPTFSARMQDLLKDHPSLCLGLN 73
Query: 118 TFLPKGYEITLDEDEA-----------PAKKTV----------EFEEAISFVNKIKKRFQ 156
LP Y++T+ + + P V ++A S++ +K+ F
Sbjct: 74 VLLPPEYQLTIPPEASEEFHKVVGRSVPVPPKVVGRSLPRPEPTIDDATSYLIAVKEAFH 133
Query: 157 SDEHVYKSFLDILNMYRKEHKDIGEVYSEVATLFKDHRDLLEEFTRFLPDTSA 209
+ Y L +L ++ D V + V L KDH +LL F FL T++
Sbjct: 134 DEPAKYGEMLKLLKDFKARRVDAACVIARVEELMKDHLNLLFGFCVFLSATTS 186
>AT4G12020.1 | Symbols: ATWRKY19, MAPKKK11, WRKY19 | WRKY19 (WRKY
DNA-binding protein 19); transcription factor |
chr4:7201650-7208590 FORWARD
Length = 1798
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 72/103 (69%), Gaps = 12/103 (11%)
Query: 55 LTTNDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHLIF 114
+TT DAL+YLK VKD F+D EKYD FLEV+ D K Q DT+GVIAR+K+LFKGH+ L+
Sbjct: 304 VTTGDALNYLKAVKDKFEDS-EKYDTFLEVLNDCKHQGVDTSGVIARLKDLFKGHDDLLL 362
Query: 115 GFNTFLPKGYEIT-LDEDEAPAKKTVEFEEAISFVNKIKKRFQ 156
GFNT+L K Y+IT L ED+ P I F++K++ ++
Sbjct: 363 GFNTYLSKEYQITILPEDDFP----------IDFLDKVEGPYE 395
>AT4G12020.2 | Symbols: ATWRKY19, MAPKKK11, WRKY19 | WRKY19 (WRKY
DNA-binding protein 19) | chr4:7201650-7209463 FORWARD
Length = 1895
Score = 100 bits (250), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 72/103 (69%), Gaps = 12/103 (11%)
Query: 55 LTTNDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHLIF 114
+TT DAL+YLK VKD F+D EKYD FLEV+ D K Q DT+GVIAR+K+LFKGH+ L+
Sbjct: 304 VTTGDALNYLKAVKDKFEDS-EKYDTFLEVLNDCKHQGVDTSGVIARLKDLFKGHDDLLL 362
Query: 115 GFNTFLPKGYEIT-LDEDEAPAKKTVEFEEAISFVNKIKKRFQ 156
GFNT+L K Y+IT L ED+ P I F++K++ ++
Sbjct: 363 GFNTYLSKEYQITILPEDDFP----------IDFLDKVEGPYE 395
>AT1G23810.1 | Symbols: | paired amphipathic helix
repeat-containing protein | chr1:8417484-8418555 FORWARD
Length = 241
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/154 (37%), Positives = 81/154 (52%), Gaps = 22/154 (14%)
Query: 56 TTNDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHLIFG 115
T +DA SYL VK+ F D+ KY+ L+++ DFKA+R + A VIARV+EL K H++L+FG
Sbjct: 106 TIDDATSYLIAVKEAFHDEPAKYEEMLKLLNDFKARRVNAASVIARVEELMKDHSNLLFG 165
Query: 116 FNTFLPKGYEITLDEDEAPAKKTVEFEEAISFVNKIKKRFQSD-EHVYKSFLDILNMYRK 174
F FL SF K+K +FQ D V S L I+ MY +
Sbjct: 166 FCVFL---------------------SATTSFTTKLKAKFQGDGSQVVDSVLQIMRMYGE 204
Query: 175 EHKDIGEVYSEVATLFKDHRDLLEEFTRFLPDTS 208
+K + Y E+ L + H DL+ E ++ D S
Sbjct: 205 GNKSKHDAYQEIVALVQGHDDLVMELSQIFTDPS 238
Score = 60.1 bits (144), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 79/179 (44%), Gaps = 21/179 (11%)
Query: 56 TTNDALSYLKQVKDMFQD-QREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHLIF 114
+ D +Y+ VK ++ + KY FL + + A+R A AR+++L K H L
Sbjct: 11 SLEDGKAYVNAVKVALEEAEPAKYQEFLRLFHEVIARRMGMATFSARMQDLLKDHPSLCL 70
Query: 115 GFNTFLPKGYEITLDEDEAPAKKTVEF---------------EEAISFVNKIKKRFQSDE 159
G N L Y+ + P + + EF ++A S++ +K+ F +
Sbjct: 71 GLNVMLAPEYQRAI-----PPEASEEFHKVVGRSVPRPEPTIDDATSYLIAVKEAFHDEP 125
Query: 160 HVYKSFLDILNMYRKEHKDIGEVYSEVATLFKDHRDLLEEFTRFLPDTSAAPSTQHAPF 218
Y+ L +LN ++ + V + V L KDH +LL F FL T++ + A F
Sbjct: 126 AKYEEMLKLLNDFKARRVNAASVIARVEELMKDHSNLLFGFCVFLSATTSFTTKLKAKF 184
>AT1G27280.1 | Symbols: | paired amphipathic helix
repeat-containing protein | chr1:9474014-9474977 FORWARD
Length = 225
Score = 96.7 bits (239), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 83/137 (60%), Gaps = 3/137 (2%)
Query: 56 TTNDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHLIFG 115
T +DA+SY+ VK+ F D+ KY F ++ D + + D AG I RV+EL K H +L+
Sbjct: 78 TIDDAVSYINTVKEAFHDEPAKYYEFFQLFYDIRYRLIDVAGGITRVEELLKAHKNLLVR 137
Query: 116 FNTFLPKGYE--ITLDEDEAPAKKTVEFEEAISFVNKIKKRFQSDE-HVYKSFLDILNMY 172
N FLP + + L ++ A + + SF+ K+K+RFQ D+ HVY+SFL+IL MY
Sbjct: 138 LNAFLPPEAQRILHLKIEQRAASDINKRKRVASFIGKLKERFQGDDRHVYESFLEILTMY 197
Query: 173 RKEHKDIGEVYSEVATL 189
++ +K + ++Y EV L
Sbjct: 198 QEGNKSVNDLYQEVGFL 214
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/187 (23%), Positives = 87/187 (46%), Gaps = 9/187 (4%)
Query: 67 VKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHLIFGFNTFLPKGYEI 126
+++++ D+ EK++ L +++D+ R D A + A + EL + H +L+ F F P
Sbjct: 1 MEEVYHDEPEKFNHILHLIRDYFNHRDDRARITACMGELMRDHLNLLVRFFDFFPAEASE 60
Query: 127 TLDEDEAPAKKTVE----FEEAISFVNKIKKRFQSDEHVYKSFLDILNMYRKEHKDIGEV 182
L + + A +V ++A+S++N +K+ F + Y F + R D+
Sbjct: 61 GLAQLQTIAATSVSPDSTIDDAVSYINTVKEAFHDEPAKYYEFFQLFYDIRYRLIDVAGG 120
Query: 183 YSEVATLFKDHRDLLEEFTRFLPDTSAAPSTQHAPFGRNSLQRFNERNSMTPMMRQMQVD 242
+ V L K H++LL FLP A H + + N+R + + ++
Sbjct: 121 ITRVEELLKAHKNLLVRLNAFLP--PEAQRILHLKIEQRAASDINKRKRVASFIGKL--- 175
Query: 243 KQRYRRD 249
K+R++ D
Sbjct: 176 KERFQGD 182
>AT1G24210.1 | Symbols: | paired amphipathic helix
repeat-containing protein | chr1:8573759-8574516 REVERSE
Length = 155
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 87/168 (51%), Gaps = 23/168 (13%)
Query: 51 TSQKLTTNDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHN 110
S LT +DA SY+ VK+ F D+ KY F++++ R D VIARV+EL K H
Sbjct: 6 VSPALTKDDAHSYIIAVKETFHDEPTKYQEFIKLLNGVCDHRVDKYSVIARVEELMKDHQ 65
Query: 111 HLIFGFNTFLPKGYEITLDEDEAPAKKTVEFEEAISFVNKIKKRFQS-DEHVYKSFLDIL 169
L+ GF+ FLP P +VE F+NK+K RFQS D HV + ++
Sbjct: 66 DLLLGFSVFLP------------PV--SVE-----DFINKLKTRFQSLDTHVVGAIRGLM 106
Query: 170 NMYRKEHKDIGEVYSEVATLFKDHRDLLEEFTRFL---PDTSAAPSTQ 214
M+++ + EV EV + H DL+E+F RF P ++A+ Q
Sbjct: 107 KMFKEGKMSVKEVQEEVIDVLFYHEDLIEDFLRFFTKNPVSTASLLLQ 154
>AT1G27260.1 | Symbols: | paired amphipathic helix
repeat-containing protein | chr1:9469935-9470954 FORWARD
Length = 222
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 75/150 (50%), Gaps = 22/150 (14%)
Query: 56 TTNDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHLIFG 115
T DA SYL VK F D+ KY+ L+++ D +A+R D A IA V+EL K H L+ G
Sbjct: 90 TIEDATSYLNSVKRAFHDEPAKYEELLKLLNDIEARRVDAASFIASVEELMKDHQTLLNG 149
Query: 116 FNTFLPKGYEITLDEDEAPAKKTVEFEEAISFVNKIKKRFQSD-EHVYKSFLDILNMYRK 174
F+ FL + F+ K+K +FQ D HV S L IL MY +
Sbjct: 150 FSVFL---------------------SAEMKFIRKLKAKFQGDGSHVADSVLQILRMYSE 188
Query: 175 EHKDIGEVYSEVATLFKDHRDLLEEFTRFL 204
+K E + EV L +DH DL+ E + +
Sbjct: 189 GNKSKSEAFQEVVPLVQDHEDLVMELIKII 218
Score = 85.5 bits (210), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 58 NDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHLIFGFN 117
N A +Y+ V+D F+D+ KY FL +++D +A+R D A + EL K H L+ GFN
Sbjct: 2 NKAFAYIIAVRDRFRDEPAKYRQFLSLLRDRRARRIDKATFFVGLVELIKDHLDLLLGFN 61
Query: 118 TFLPKGYEITLDED--------EAPAKKTVEFEEAISFVNKIKKRFQSDEHVYKSFLDIL 169
LP ++I + P + T+ E+A S++N +K+ F + Y+ L +L
Sbjct: 62 ALLPARFQIPITPAGFQNVVGRSVPPETTI--EDATSYLNSVKRAFHDEPAKYEELLKLL 119
Query: 170 NMYRKEHKDIGEVYSEVATLFKDHRDLLEEFTRFL 204
N D + V L KDH+ LL F+ FL
Sbjct: 120 NDIEARRVDAASFIASVEELMKDHQTLLNGFSVFL 154
>AT5G15040.1 | Symbols: | paired amphipathic helix
repeat-containing protein | chr5:4869911-4870256 REVERSE
Length = 87
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 49/70 (70%)
Query: 62 SYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHLIFGFNTFLP 121
+Y +VKD F DQ EKYD+F ++ D KA+R A++KELFK HN LI GFNTFLP
Sbjct: 6 AYFMEVKDTFHDQIEKYDMFKNILLDLKARRIGRHTAFAQLKELFKEHNELIIGFNTFLP 65
Query: 122 KGYEITLDED 131
GY+I LD+D
Sbjct: 66 TGYKIALDDD 75
>AT1G27240.1 | Symbols: | paired amphipathic helix
repeat-containing protein | chr1:9466224-9467063 FORWARD
Length = 186
Score = 80.9 bits (198), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/172 (35%), Positives = 86/172 (50%), Gaps = 23/172 (13%)
Query: 56 TTNDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHLIFG 115
T +DA SY+ VK+ F D+ KY+ F+++M D + D A IA++ EL KGH L+ G
Sbjct: 11 TLSDAHSYITAVKEAFHDEPTKYEEFIKLMNDIRDHGVDKASGIAKLTELIKGHPRLLRG 70
Query: 116 FNTFLP----------KGYEITLDEDEAP-------AKKTVEFEEAI-----SFVNKIKK 153
+ F P K I D+ P AK T + I +F+N +K
Sbjct: 71 LSFFFPQVNRDIHHEAKRTIILKDKATIPPEAAYRGAKSTYTKIKQIEPDWENFMNMLKT 130
Query: 154 RFQS-DEHVYKSFLDILNMYRKEHKDIGEVYSEVATLFKDHRDLLEEFTRFL 204
RF+S D HV +SFL I+ MY + K EV EV L H DL+++F R
Sbjct: 131 RFRSLDTHVVESFLKIMIMYDEGKKSEKEVQEEVVDLLYYHEDLIDKFFRLF 182
>AT1G27220.1 | Symbols: | paired amphipathic helix
repeat-containing protein | chr1:9463793-9465431 FORWARD
Length = 184
Score = 77.4 bits (189), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/73 (50%), Positives = 48/73 (65%)
Query: 54 KLTTNDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHLI 113
K T +DA +Y++ VK F + +KYD F+ +MK+FKA++ D I VKEL KGH LI
Sbjct: 9 KATVDDAYAYIRTVKSTFHNDPDKYDDFMAIMKNFKARKIDRNTCIEEVKELLKGHRDLI 68
Query: 114 FGFNTFLPKGYEI 126
GFN FLPK EI
Sbjct: 69 SGFNAFLPKCLEI 81
>AT1G27250.1 | Symbols: | paired amphipathic helix
repeat-containing protein | chr1:9468555-9469621 FORWARD
Length = 137
Score = 74.7 bits (182), Expect = 4e-13, Method: Composition-based stats.
Identities = 36/73 (49%), Positives = 48/73 (65%)
Query: 54 KLTTNDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHLI 113
+ T +DA +YL+ V+ F + +KYD F+ VM +FKA+R D G I V++L KGH LI
Sbjct: 16 RATKDDAYAYLRAVRAKFHNDSKKYDDFVAVMTNFKARRIDRDGCIKEVEQLLKGHRDLI 75
Query: 114 FGFNTFLPKGYEI 126
GFN FLPK EI
Sbjct: 76 SGFNAFLPKCLEI 88
>AT1G27270.1 | Symbols: | paired amphipathic helix
repeat-containing protein | chr1:9472064-9473136 FORWARD
Length = 241
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 76/152 (50%), Gaps = 22/152 (14%)
Query: 56 TTNDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHLIFG 115
T +DA SYL VK+ F D+ KY +++ D KA+R + A VIAR++EL K H +L+ G
Sbjct: 110 TMDDATSYLNAVKEAFHDEPAKYMEITKLLTDLKARRINAASVIARMEELLKDHLNLLLG 169
Query: 116 FNTFLPKGYEITLDEDEAPAKKTVEFEEAISFVNKIKKRFQSD-EHVYKSFLDILNMYRK 174
F FL +P ++ F+ K+K RF D V S L IL M+ +
Sbjct: 170 FCVFL------------SPTRR---------FITKLKARFLGDGSQVVDSVLQILRMHSE 208
Query: 175 EHKDIGEVYSEVATLFKDHRDLLEEFTRFLPD 206
+K E EV L + H DLL E + D
Sbjct: 209 GNKSKDEASQEVRALIQGHEDLLMELSEIFSD 240
>AT1G24220.1 | Symbols: | paired amphipathic helix
repeat-containing protein | chr1:8578647-8582402 REVERSE
Length = 744
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 36/54 (66%)
Query: 56 TTNDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGH 109
T +DA SY+ VK+ F D+ KY FL+++ D+KA+R D VIARV EL K H
Sbjct: 173 TLDDARSYIDSVKEAFHDEPAKYAEFLKLLNDYKARRLDADSVIARVDELTKDH 226
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 145 ISFVNKIKKRFQS-DEHVYKSFLDILNMYRKEHKDIGEVYSEVATLFKDHRDLLEEFTRF 203
++F+NK+K RFQ D HV SF I+ MY++ K EV+ EV L H DL +FTR
Sbjct: 374 LNFMNKLKTRFQRIDTHVVGSFHSIMTMYKEGKKSRKEVHEEVCDLLYYHEDLRADFTRI 433
Query: 204 LP 205
P
Sbjct: 434 FP 435
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 50 TTSQKLTTNDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGH 109
+ SQ+ T DA+SY++ VK+ F D+ K+D F + + + R + + AR+ EL G+
Sbjct: 5 SVSQEPTMADAVSYIESVKEEFHDEPAKFDEFRMRLNEVRDDRVEKDRITARINELISGN 64
Query: 110 NHLIFGFNTFLPKGYEITL 128
L G F P+ EIT+
Sbjct: 65 PKLHLGSKVFFPEA-EITI 82
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%)
Query: 56 TTNDALSYLKQVKDMFQDQREKYDLFLEVMKDFKAQRTDTAGVIARVKELFKGHNHLIFG 115
T + ++Y+ VK+ F D+ K+ FL +M D + + A AR+ E+ KGH L+
Sbjct: 499 TIRETVTYIADVKEAFLDEPAKFHEFLRLMNDVCDHKIEEANGSARMAEIIKGHPRLLLV 558
Query: 116 FNTFLPKG 123
+ F PK
Sbjct: 559 LSVFFPKS 566
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 48/101 (47%), Gaps = 19/101 (18%)
Query: 110 NHLIFGFNTFLPKGYEITLDEDEAPAKKTVEFEEAISFVNKIKKRFQS-DEHVYKSFLDI 168
+HL F F+PK AK+T+ E S NK RFQ HV S L I
Sbjct: 652 DHLAF----FIPK------------AKRTIPPAE--SNKNKKNARFQGYGSHVVNSVLQI 693
Query: 169 LNMYRKEHKDIGEVYSEVATLFKDHRDLLEEFTRFLPDTSA 209
L MY + +K E Y EV +L ++H DL+ EF + SA
Sbjct: 694 LKMYSEGNKSKDEAYQEVVSLLQNHVDLVMEFGDYFSGISA 734
>AT3G24260.1 | Symbols: | similar to unknown protein [Arabidopsis
thaliana] (TAIR:AT3G28870.1); similar to putative
histone deacetylase complex, SIN3 component
[Physcomitrella patens subsp. patens] (GB:EDQ66876.1);
contains InterPro domain Histone deacetylase interacting
(InterPro:IPR013194) | chr3:8793844-8794968 REVERSE
Length = 374
Score = 50.4 bits (119), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 72/170 (42%), Gaps = 27/170 (15%)
Query: 452 CKRCTPSYRLLPSDYPIPTASQRSELGAQVLNDHWVSVTSGSEDYSFKHMRK-NQYEESL 510
+R TP+Y+L+P + P +S VLN+ WV V S Y + + E+ +
Sbjct: 211 TERATPNYKLIPKEEQTPVSS-------TVLNNTWV-VNS----YDIQAQKNLTDIEKDM 258
Query: 511 FRCXXXXXXXXXXXXSVSSASKRAEELYNNINENKISVEALSRIEDHFTVLNLRCIERLY 570
+ ++SA+K AEE+ N + L + F RC E LY
Sbjct: 259 YNWEDQMFELDMLVGFLTSAAKNAEEVINGERD-------LKDLGGKF----YRCAENLY 307
Query: 571 GDHGLDVIDILRKNPTHALPVILTRLKQKQEEWNRCRSDFNKVWAEIYAK 620
G D+++I+++N LP IL RL QK E R V + K
Sbjct: 308 GR---DMLEIVKENHQRVLPAILNRLNQKLREVTLVRERLKPVLKQTIEK 354
>AT3G28870.1 | Symbols: | similar to unknown protein [Arabidopsis
thaliana] (TAIR:AT3G24260.1); similar to hypothetical
protein [Vitis vinifera] (GB:CAN75158.1); similar to
unnamed protein product [Vitis vinifera]
(GB:CAO64800.1); contains InterPro domain Histone
deacetylase interacting (InterPro:IPR013194); contains
InterPro domain Sec63 (InterPro:IPR004179) |
chr3:10891592-10893076 FORWARD
Length = 355
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 564 RCIERLYGDHGLDVIDILRKNPTHALPVILTRLKQKQEEWNRCRSDFNKVWAEIYAKNHY 623
RC+E LYG+ D+ + + ++ ALP+IL+RLKQK R +W + K
Sbjct: 195 RCVEMLYGE---DMFETVTEDHQRALPMILSRLKQKLRHVTTARERLKPLWKQTIEK--- 248
Query: 624 KSLDHRSFYFKQQDSKNL 641
S + R +D+ NL
Sbjct: 249 LSTNQRGSTISSEDNNNL 266