Miyakogusa Predicted Gene
- chr1.LjT14G19.110.nc
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr1.LjT14G19.110.nc - phase: 2 /partial
(1988 letters)
Database: TAIR8_pep
32,825 sequences; 13,166,001 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G64790.1 | Symbols: | binding | chr1:24068895-24085571 REVERSE 2874 0.0
AT3G25800.2 | Symbols: PR 65, PR65, PDF1 | PDF1 (65 KDA REGULATO... 49 3e-05
AT3G25800.1 | Symbols: PR 65, PR65, PDF1 | PDF1 (65 KDA REGULATO... 49 4e-05
AT1G25490.1 | Symbols: REGA, PR65, ATB BETA BETA, EER1, RCN1 | R... 45 4e-04
>AT1G64790.1 | Symbols: | binding | chr1:24068895-24085571 REVERSE
Length = 2540
Score = 2874 bits (7450), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1428/2013 (70%), Positives = 1643/2013 (81%), Gaps = 91/2013 (4%)
Query: 1 DSDISLDPQIPFIPSVEVLVKALLIISPEAMKLAPDSF-VRIILCSHHPCVLGSAKRDAV 59
D+D D Q PF+PSVEVLVKAL++IS A+ P S+ VR I CSHHP ++G+ KRDAV
Sbjct: 564 DADNPADHQAPFVPSVEVLVKALIVISSAAVAGPPSSWIVRAIFCSHHPSIVGTGKRDAV 623
Query: 60 WKRLSKCLQTHGFDVIDIVSANVVNLVQVLLGPLGLKSANPLEQQAAISSLSTLMLIIPG 119
WK L LGP+GL SA EQQAA+ SLST+M + P
Sbjct: 624 WKSL--------------------------LGPMGLTSAKTPEQQAAVYSLSTMMSLAPE 657
Query: 120 DIYTEFEEHLRNLPERFSHDMLSENDIQIFNTPEGMLSSEQGVYVAESVAAKNTKQAKGR 179
D +T F+ HL++LP+R SHDMLSE DI+IF+TPEGML SEQGVYVA+++ AK TKQ
Sbjct: 658 DTFTVFKMHLQDLPDRLSHDMLSETDIKIFHTPEGMLLSEQGVYVAQTIGAKYTKQ---- 713
Query: 180 FRMYDDEDDLDHARSNHSMKRDQPIRETAGAGKRDSGKATKKAGKCFPYTDKSXXXXXXX 239
SNHS+K+ RETA +G+RD+ K TKKA DK
Sbjct: 714 -----------EPSSNHSLKKGLASRETANSGRRDTAKLTKKA-------DKGKTAKEEA 755
Query: 240 XXXXXXXXXSVRDKVCEIQKNLSLMLRTLGDMAIANSVFAHSKLPSMVKFVEPLLRSPIV 299
S R+ V IQK+LSL+L LG+M +AN VF HS+LP + F++PLLRSPIV
Sbjct: 756 RELMLKEEASTRENVHRIQKSLSLVLHALGEMGLANPVFCHSQLPFLATFLDPLLRSPIV 815
Query: 300 SDEAFETMVKLSRCIAPPLCEWALDISTALRLIVTDEVHLLLDLVPSAAEEEVNGRPSLG 359
S AFE +VKL+RC PLC WAL+ISTALRLI DEV D PS + G+ G
Sbjct: 816 SAAAFENLVKLARCTVQPLCNWALEISTALRLIAIDEVDTSFDFRPSVDKA---GKTYEG 872
Query: 360 LFERILDGLSTSCKSGALPVDSFSFVFP-------------------------------- 387
LFERI++GLS SCKSG LPVD+F+F+FP
Sbjct: 873 LFERIVNGLSISCKSGPLPVDTFTFIFPILERILLSSKRTKLHDDVLQILYMHLDPMLPL 932
Query: 388 -------ALYHVLGVVPAYQSSIGPALNELSLGLQPDEVASALYGVYSKDVHVRMACLNA 440
LYHVLGVVPAYQ+S+GPALNEL LGLQ D+VA+ALYGVYSKDVHVR+ACLNA
Sbjct: 933 PRLRMISVLYHVLGVVPAYQASVGPALNELCLGLQADDVANALYGVYSKDVHVRLACLNA 992
Query: 441 VRCIPAVANRSLPQNIEVATSLWIALHDPEKSIAQVAEDIWDHYGFDFGTDFSGIFKALS 500
V+CIPAV+ SLPQN+++AT++WIALHDPEKS+A+ A+D+W YG D GTD+SGIFKALS
Sbjct: 993 VKCIPAVSKCSLPQNVKIATNIWIALHDPEKSVAESADDLWARYGHDLGTDYSGIFKALS 1052
Query: 501 HVNYNVRXXXXXXXXXXXDEYPDSIHECLSTLFSLYIRDMGIGDDNLDAGWLGRQGIALA 560
H+N NVR E P SI LSTLFSLYIRD G+D DAGW+GRQGIALA
Sbjct: 1053 HINLNVRLAAAEALADALHESPSSIQLSLSTLFSLYIRDATSGEDVFDAGWIGRQGIALA 1112
Query: 561 LHSAADVLRTKDLPIVMTFLISRALADPNADVRGRMINAGILIIDKSGKDNVSLLFPIFE 620
L SAADVL TKDLP VMTFLISRALADPN DVRG+MINAGI+IIDK GK+NVSLLFPIFE
Sbjct: 1113 LQSAADVLTTKDLPAVMTFLISRALADPNTDVRGKMINAGIMIIDKHGKENVSLLFPIFE 1172
Query: 621 NYLNKTAPDEEKYDLVREGVVIFTGALAKHLAKDDPKVHAVVDKLLDVINTPSEAVQRAV 680
NYLNK A DEE+YDLVREGVVIFTGALAKHLA+DDPKVH VV+KLL+V+NTPSE+VQRAV
Sbjct: 1173 NYLNKEASDEEEYDLVREGVVIFTGALAKHLARDDPKVHNVVEKLLEVLNTPSESVQRAV 1232
Query: 681 SACLSPLMQSKQDDAAALVTRLLDQLLKSEKYGERRGAAFGLAGVVKGFGISCLKKYRIV 740
S CLSPL+ SKQ++A AL RLLD+L+KS+KYGERRGAAFGLAGVV GFGIS LKKY ++
Sbjct: 1233 STCLSPLVLSKQEEAPALFLRLLDKLMKSDKYGERRGAAFGLAGVVMGFGISSLKKYGLI 1292
Query: 741 IILQEGLVDRNSAKSREGALLGFECLCEILGRLFEPYVIKMLPLLLVSFSDQXXXXXXXX 800
+ LQE L+DRNSAK REGALL FECLCE LG+LFEPYVIKMLPLLLVSFSDQ
Sbjct: 1293 VTLQEALIDRNSAKRREGALLAFECLCEKLGKLFEPYVIKMLPLLLVSFSDQVGAVREAA 1352
Query: 801 XXXXXXMMSQLSAQGVKLVLPSLLKGLEDKAWRTKQSSVQLLGAMAYCAPQQLSQCLPKI 860
MMSQLSA GVKLVLPSLLKGLEDKAWRTKQSSVQLLGAMA+CAPQQLSQCLP++
Sbjct: 1353 ECAARAMMSQLSAYGVKLVLPSLLKGLEDKAWRTKQSSVQLLGAMAFCAPQQLSQCLPRV 1412
Query: 861 VPKLTEVLTDTHPKVQSAGQMALQQVGSVIKNPEISALVPTLLKGLSDPNEYTKYSLDIL 920
VPKLTEVLTDTHPKVQSAGQ+ALQQVGSVIKNPEIS+LVPTLL L+DPNEYT+++LD L
Sbjct: 1413 VPKLTEVLTDTHPKVQSAGQLALQQVGSVIKNPEISSLVPTLLLALTDPNEYTRHALDTL 1472
Query: 921 LQTTFVNSIDAPSLALLVPIVHRGLRERSADTKKRASQIVGNMCSLVTEATDMIPYIGLL 980
LQTTFVNS+DAPSLALLVPIVHRGLRERS++TKK+ASQIVGNMCSLVTE DMIPYIGLL
Sbjct: 1473 LQTTFVNSVDAPSLALLVPIVHRGLRERSSETKKKASQIVGNMCSLVTEPKDMIPYIGLL 1532
Query: 981 LPEVKKVLVDPIPEVRSVAARAIGSLIGGMGEENFPDLVPWLFDTLKSDNSNVERSGAAQ 1040
LPEVKKVLVDPIPEVRSVAARA+GSLI GMGE+NFPDLVPWLF+TLKSD SNVER GAAQ
Sbjct: 1533 LPEVKKVLVDPIPEVRSVAARAVGSLIRGMGEDNFPDLVPWLFETLKSDTSNVERYGAAQ 1592
Query: 1041 GLSEVLAALGIGFFEHVLPDIIRNCSHQKASVRDGYLTLFKFLPRSLGVQFQNYLSQVLP 1100
GLSEV+AALG +FE++LPD+IR+CSHQKASVRDGYLTLFKFLPRSLG QFQ YL VLP
Sbjct: 1593 GLSEVIAALGTDYFENILPDLIRHCSHQKASVRDGYLTLFKFLPRSLGAQFQKYLQLVLP 1652
Query: 1101 AILDGLADENESVRDAALGAGHVLVEHYAATSLPLLLPVVEDGIFNDNWRIRQSSVELLG 1160
AILDGLADENESVRDAALGAGHVLVEH+A TSLPLLLP VEDGIFNDNWRIRQSSVELLG
Sbjct: 1653 AILDGLADENESVRDAALGAGHVLVEHHATTSLPLLLPAVEDGIFNDNWRIRQSSVELLG 1712
Query: 1161 DLLFKVAGTSGKALLEGGSDDEGSSTEAHGRAIIEVLGYSKRNEVLAALYMVRTDVSLSV 1220
DLLFKVAGTSGKALLEGGSDDEG+STEA GRAII++LG KRNEVLAALYMVRTDVSLSV
Sbjct: 1713 DLLFKVAGTSGKALLEGGSDDEGASTEAQGRAIIDILGMDKRNEVLAALYMVRTDVSLSV 1772
Query: 1221 RQAALHVWKTIVANTPKTLREIMPVLMDTLIASLASSSSERRQVAGRSLGELVRKLGERV 1280
RQAALHVWKTIVANTPKTL+EIMP+LM TLI+SLAS SSERRQVAGRSLGELVRKLGERV
Sbjct: 1773 RQAALHVWKTIVANTPKTLKEIMPILMSTLISSLASPSSERRQVAGRSLGELVRKLGERV 1832
Query: 1281 LPLIIPILSRGLNDPDSSKRQGVCSGLSEVMASAGKSQLLTFMNDLILTIRTALCDSVPE 1340
LPLIIPILS+GL DPD KRQGVC GL+EVMASAG+SQLL+FM+ LI TIRTALCDS E
Sbjct: 1833 LPLIIPILSKGLKDPDVDKRQGVCIGLNEVMASAGRSQLLSFMDQLIPTIRTALCDSALE 1892
Query: 1341 VRESAGLAFSTLYKSAGLQAIDEIVPTLLHALEDDRTSDTALDGLKQILSVRTSAVLPHI 1400
VRESAGLAFSTLYKSAGLQA+DEI+PTLL ALEDD S TALDGLKQI+SVRT+AVLPHI
Sbjct: 1893 VRESAGLAFSTLYKSAGLQAMDEIIPTLLEALEDDEMSTTALDGLKQIISVRTAAVLPHI 1952
Query: 1401 FPKLVHPPLSAFHAHALGALADVAGPGLDFHLGTVLPPLLSAMGSDDKEVQTSAKEAAET 1460
PKLVH PLSA +AHALGALA+VAG G + HLGT+LP LLSAMG ++KEVQ A+EAAE
Sbjct: 1953 LPKLVHLPLSALNAHALGALAEVAGAGFNTHLGTILPALLSAMGGENKEVQELAQEAAER 2012
Query: 1461 VVSVIDEEGIEPLISELVKGVSDSQATVRRSSSYLIGYFLKNSKLYLVDEAPNMISTLII 1520
VV VIDEEG+E L+SEL+KGVSDSQA++RRSS+YLIGYF K+SKLYL+DEAPNMISTLI+
Sbjct: 2013 VVLVIDEEGVETLLSELLKGVSDSQASIRRSSAYLIGYFFKSSKLYLIDEAPNMISTLIV 2072
Query: 1521 LLSDPDTSTVSVAWEALSRVIISVPKEVLPSYIKLVRDAISTSRDKERRKRKGGPILIPG 1580
+LSD D++TV+V+WEAL+RVI SVPKEVLPSYIKLVRDA+ST+RDKERRKRKGG ++IPG
Sbjct: 2073 MLSDSDSTTVAVSWEALARVIGSVPKEVLPSYIKLVRDAVSTARDKERRKRKGGYVVIPG 2132
Query: 1581 FCLPKALQPILPIFLQGLISGSAELREQAALGLGELIEVTSEQSLKEFVIPITGPLIRII 1640
CLPK+L+P+LP+FLQGLISGSAELREQAA+GLGELIEVTSEQ+LKEFVIPITGPLIRII
Sbjct: 2133 LCLPKSLKPLLPVFLQGLISGSAELREQAAIGLGELIEVTSEQALKEFVIPITGPLIRII 2192
Query: 1641 GDRFPWQVKSAILSTLTIMIRKGGISLKPFLPQLQTTFVKCLQDSTRTIRXXXXXXXXXX 1700
GDRFPWQVKSAIL+TL I+I++GG++LKPFLPQLQTTFVKCLQDSTRTIR
Sbjct: 2193 GDRFPWQVKSAILATLIILIQRGGMALKPFLPQLQTTFVKCLQDSTRTIRSSAAVALGKL 2252
Query: 1701 XXXXTRVDPLVSDLLSTLQGSDGGVREAILTALKGVMKHAGKNVSSAVRDRAYSVLKDLI 1760
TR+DPLV DL+++ Q +D GVREAIL+A++GV+KHAGK++ AVR R + +LKDL+
Sbjct: 2253 SALSTRIDPLVGDLMTSFQAADSGVREAILSAMRGVIKHAGKSIGPAVRVRIFDLLKDLM 2312
Query: 1761 HHDDERVRMYAARILGILTQYLEDVQLTELIQELSSLANSPSWSPRHGSILTISSLFHHN 1820
HH+D++VR+ A +LG+L+QYLE QL+ L+QE++ L+ S +W RHGS+L ISSL HN
Sbjct: 2313 HHEDDQVRISATSMLGVLSQYLEAAQLSVLLQEVNDLSASQNWGARHGSVLCISSLLKHN 2372
Query: 1821 PVPIFSSPLFPTIVDCLRVTLKDEKFPLRETSTKALGRLLLYRAQVDPPDTLLYKDVLSL 1880
P I +S LF ++++ L+ +LKDEKFPLRE+STKALGRLLL + DP +T + DVLS
Sbjct: 2373 PSTIMTSSLFSSMLNSLKSSLKDEKFPLRESSTKALGRLLLKQLATDPSNTKVVIDVLSS 2432
Query: 1881 LVSSTHDESSEVRRRALSAIKAVAKANPSAIMLHGTIVGPAIAECLKDASTPVRLAAERC 1940
+VS+ HD+SSEVRRRALS++KA AK NPSA M + +++GP +AECLKD +TPVRLAAERC
Sbjct: 2433 IVSALHDDSSEVRRRALSSLKAFAKDNPSATMANISVIGPPLAECLKDGNTPVRLAAERC 2492
Query: 1941 AVHALQLTKGSENVQAAQKYITGLDARRLSKLP 1973
A+H QLTKG+ENVQAAQKYITGLDARRLSK P
Sbjct: 2493 ALHVFQLTKGAENVQAAQKYITGLDARRLSKFP 2525
>AT3G25800.2 | Symbols: PR 65, PR65, PDF1 | PDF1 (65 KDA REGULATORY
SUBUNIT OF PROTEIN PHOSPHATASE 2A); protein phosphatase
type 2A regulator | chr3:9424273-9427020 REVERSE
Length = 544
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 14/228 (6%)
Query: 932 PSLALLVPIVHRGLRERSADTKKRASQIVGNMCSLVTEATDMIPYIGL--LLPEVKKVLV 989
P+ LVP R LR+ A+ + A+ V C ++ P I + +LP VK++
Sbjct: 276 PTRTELVPAYVRLLRDNEAEVRIAAAGKVTKFCRILN------PEIAIQHILPCVKELSS 329
Query: 990 DPIPEVRSVAARAIGSLIGGMGEE-NFPDLVPWLFDTLKSDNSNVERSGAAQGLSEVLAA 1048
D VRS A I + +G++ L+P LK + +V R L +V
Sbjct: 330 DSSQHVRSALASVIMGMAPVLGKDATIEHLLPIFLSLLKDEFPDV-RLNIISKLDQVNQV 388
Query: 1049 LGIGFF-EHVLPDIIRNCSHQKASVRDGYLTLFKFLPRSLGVQFQNYLSQVLPAILDGLA 1107
+GI + +LP I+ + VR + L LGV F + ++ + L
Sbjct: 389 IGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVGF--FDDKLGALCMQWLQ 446
Query: 1108 DENESVRDAALGAGHVLVEHYAAT-SLPLLLPVVEDGIFNDNWRIRQS 1154
D+ S+RDAA L E + ++ ++P V + + N ++ R +
Sbjct: 447 DKVHSIRDAAANNLKRLAEEFGPEWAMQHIVPQVLEMVNNPHYLYRMT 494
>AT3G25800.1 | Symbols: PR 65, PR65, PDF1 | PDF1 (65 KDA REGULATORY
SUBUNIT OF PROTEIN PHOSPHATASE 2A); protein phosphatase
type 2A regulator | chr3:9424059-9427020 REVERSE
Length = 587
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 14/228 (6%)
Query: 932 PSLALLVPIVHRGLRERSADTKKRASQIVGNMCSLVTEATDMIPYIGL--LLPEVKKVLV 989
P+ LVP R LR+ A+ + A+ V C ++ P I + +LP VK++
Sbjct: 276 PTRTELVPAYVRLLRDNEAEVRIAAAGKVTKFCRILN------PEIAIQHILPCVKELSS 329
Query: 990 DPIPEVRSVAARAIGSLIGGMGEE-NFPDLVPWLFDTLKSDNSNVERSGAAQGLSEVLAA 1048
D VRS A I + +G++ L+P LK + +V R L +V
Sbjct: 330 DSSQHVRSALASVIMGMAPVLGKDATIEHLLPIFLSLLKDEFPDV-RLNIISKLDQVNQV 388
Query: 1049 LGIGFF-EHVLPDIIRNCSHQKASVRDGYLTLFKFLPRSLGVQFQNYLSQVLPAILDGLA 1107
+GI + +LP I+ + VR + L LGV F + ++ + L
Sbjct: 389 IGIDLLSQSLLPAIVELAEDRHWRVRLAIIEYIPLLASQLGVGF--FDDKLGALCMQWLQ 446
Query: 1108 DENESVRDAALGAGHVLVEHYAAT-SLPLLLPVVEDGIFNDNWRIRQS 1154
D+ S+RDAA L E + ++ ++P V + + N ++ R +
Sbjct: 447 DKVHSIRDAAANNLKRLAEEFGPEWAMQHIVPQVLEMVNNPHYLYRMT 494
>AT1G25490.1 | Symbols: REGA, PR65, ATB BETA BETA, EER1, RCN1 | RCN1
(ROOTS CURL IN NPA); protein phosphatase type 2A
regulator | chr1:8951687-8954886 FORWARD
Length = 588
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 95/222 (42%), Gaps = 22/222 (9%)
Query: 937 LVPIVHRGLRERSADTKKRASQIVGNMCSLVTEATDMIPYIGL--LLPEVKKVLVDPIPE 994
LVP R LR+ A+ + A+ V C L+ P + + +LP VK++ D
Sbjct: 281 LVPAYVRLLRDNEAEVRIAAAGKVTKFCRLLN------PELAIQHILPCVKELSSDSSQH 334
Query: 995 VRSVAARAIGSLIGGMG-----EENFPDLVPWLFDTLKSDNSNVERSGAAQGLSEVLAAL 1049
VRS A+ S+I GM + L+P LK + +V R L +V +
Sbjct: 335 VRS----ALASVIMGMAPILGKDSTIEHLLPIFLSLLKDEFPDV-RLNIISKLDQVNQVI 389
Query: 1050 GIGFF-EHVLPDIIRNCSHQKASVRDGYLTLFKFLPRSLGVQFQNYLSQVLPAILDGLAD 1108
GI + +LP I+ + VR + L LG+ F + ++ + L D
Sbjct: 390 GIDLLSQSLLPAIVELAEDRHWRVRLAIIEYVPLLASQLGIGF--FDDKLGALCMQWLQD 447
Query: 1109 ENESVRDAALGAGHVLVEHYAAT-SLPLLLPVVEDGIFNDNW 1149
+ S+R+AA L E + ++ L+P V D + N ++
Sbjct: 448 KVYSIREAAANNLKRLAEEFGPEWAMQHLVPQVLDMVNNPHY 489