Miyakogusa Predicted Gene

chr1.LjT05B18.230.nd
Show Alignment:  

BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr1.LjT05B18.230.nd - phase: 0 /partial
         (373 letters)

Database: TAIR8_pep 
           32,825 sequences; 13,166,001 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G06670.1 | Symbols:  | kinesin motor protein-related | chr5:2...   348   3e-96
AT3G12020.1 | Symbols:  | kinesin motor protein-related | chr3:3...   252   3e-67
AT4G39050.1 | Symbols:  | kinesin-related protein (MKRP2) | chr4...   187   7e-48
AT2G21380.1 | Symbols:  | kinesin motor protein-related | chr2:9...   180   1e-45
AT1G21730.1 | Symbols:  | kinesin-related protein (MKRP1) | chr1...   160   9e-40

>AT5G06670.1 | Symbols:  | kinesin motor protein-related |
           chr5:2048244-2055020 REVERSE
          Length = 992

 Score =  348 bits (893), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 209/366 (57%), Positives = 258/366 (70%), Gaps = 19/366 (5%)

Query: 1   TSTKSVDQIDLLREQHKILSGEMALHSSALKRLSEEAARNPQNGQIHVEMKRLKDEIKSK 60
           T  K +DQ+++LREQ K LS EMA  S + K LSEEAA+ PQN +I  E+  L  +IK+K
Sbjct: 633 TRIKMIDQMEILREQQKTLSEEMAQQSRSFKLLSEEAAKAPQNEEIKAEIINLNGDIKAK 692

Query: 61  NEQIDLLEKRISSHSFAS-DKTDQSGVSHTVAELIAQLNEKSFELEVKAADNRIIQEQLN 119
           N+QI  L K+I     AS D+ D+S +   V+E+ AQLNEK FELEVKAADNRIIQEQL 
Sbjct: 693 NDQIATLGKQILDFVIASHDELDKSDIVQAVSEMRAQLNEKCFELEVKAADNRIIQEQLT 752

Query: 120 QKICEFESLQETVASFKQQLADALELRNFNPVDNHLQHSSVTNNYHGELHLDKGNISNAN 179
           +K    E LQE VA+ KQQL+DALEL + N V  H+Q SS +               N N
Sbjct: 753 EKTSFCEDLQEEVANLKQQLSDALELGDINSVTCHMQQSSQS--------------PNKN 798

Query: 180 EGILLQSQISEIEELNQKVAELTESKEQLEIRNRKLAEESTYAKGLASAAAVELKALSEE 239
           E  ++++Q  EIEEL  K AEL+E  EQLEIRN+KLAEES+YAK LASAAA+ELKALSEE
Sbjct: 799 EEKVIEAQAFEIEELKLKAAELSELNEQLEIRNKKLAEESSYAKELASAAAIELKALSEE 858

Query: 240 VAKLMNHNEKLAAELAASKNS--PTQRRTSGTIQNGRRESHVKPRRNDQGGSNSDTKREL 297
           +A+LMNHNE+LAA+LAA + S   T +  +G ++NGRRES  K  R +Q  S  + KREL
Sbjct: 859 IARLMNHNERLAADLAAVQKSSVTTPQGKTGNLRNGRRESVSK--RKEQENSLMELKREL 916

Query: 298 ALSKEREQSYEAALLEKNQKEAELQRKVEESKQREAYLENELANMWVLVAKLKKSHGAET 357
            +SKERE S+EAAL+EK Q+EAELQR VEESKQREAYLENELANMW LVAKL+    A +
Sbjct: 917 TVSKEREVSFEAALIEKIQREAELQRTVEESKQREAYLENELANMWGLVAKLRSQGAANS 976

Query: 358 DVSGST 363
            +S S 
Sbjct: 977 GLSDSV 982


>AT3G12020.1 | Symbols:  | kinesin motor protein-related |
            chr3:3827022-3834152 FORWARD
          Length = 1030

 Score =  252 bits (643), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 153/278 (55%), Positives = 187/278 (67%), Gaps = 49/278 (17%)

Query: 101  SFELEVKAADNRIIQEQLNQKICEFESLQETVASFKQQLADALELRNFNPVDNHLQHSSV 160
            + +L VKAADNRIIQ+ LN+K CE E LQE VA+ KQQL++ALEL               
Sbjct: 793  TMKLMVKAADNRIIQQTLNEKTCECEVLQEEVANLKQQLSEALEL--------------- 837

Query: 161  TNNYHGELHLDKGNISNANEGILLQSQISEIEELNQKVAELTESKEQLEIRNRKLAEEST 220
                                     +Q ++I+EL Q   EL+ESKEQLE+RNRKLAEES+
Sbjct: 838  -------------------------AQGTKIKELKQDAKELSESKEQLELRNRKLAEESS 872

Query: 221  YAKGLASAAAVELKALSEEVAKLMNHNEKLAAELAASKNSPTQRRTSGTI----QNGRRE 276
            YAKGLASAAAVELKALSEEVAKLMN NE+LAAELA  K+   QR  +GT      NGRRE
Sbjct: 873  YAKGLASAAAVELKALSEEVAKLMNQNERLAAELATQKSPIAQRNKTGTTTNVRNNGRRE 932

Query: 277  SHVKPRRNDQGGSNSDTKRELALSKEREQSYEAALLEKNQKEAELQRKVEESKQREAYLE 336
            S  K  R +    + + KREL +SKERE SYEAAL EK Q+EAEL+R +EE+KQREAYLE
Sbjct: 933  SLAK--RQEHDSPSMELKRELRMSKERELSYEAALGEKEQREAELERILEETKQREAYLE 990

Query: 337  NELANMWVLVAKLKKSHGAETDVSGS---TRGSLQFDG 371
            NELANMWVLV+KL++S GA++++S S   TR + Q +G
Sbjct: 991  NELANMWVLVSKLRRSQGADSEISDSISETRQTEQTEG 1028



 Score =  103 bits (258), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 60/107 (56%), Positives = 78/107 (72%), Gaps = 1/107 (0%)

Query: 1   TSTKSVDQIDLLREQHKILSGEMALHSSALKRLSEEAARNPQNGQIHVEMKRLKDEIKSK 60
           TS K  D++DLLREQ KILS E AL  S+LKR+S+EAA++PQN +I+ E+K L D+IK+K
Sbjct: 627 TSNKMSDELDLLREQKKILSEEAALQLSSLKRMSDEAAKSPQNEEINEEIKVLNDDIKAK 686

Query: 61  NEQIDLLEKRISSHSFAS-DKTDQSGVSHTVAELIAQLNEKSFELEV 106
           N+QI  LE++I      S +  D+S +   VAEL  QLNEKSFELEV
Sbjct: 687 NDQIATLERQIMDFVMTSHEALDKSDIMQAVAELRDQLNEKSFELEV 733


>AT4G39050.1 | Symbols:  | kinesin-related protein (MKRP2) |
           chr4:18193456-18200142 FORWARD
          Length = 1055

 Score =  187 bits (476), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 147/377 (38%), Positives = 204/377 (54%), Gaps = 40/377 (10%)

Query: 7   DQIDLLREQHKILSGEMALHSSALKRLSEEAARNPQNGQIHVEMKRLKDEIKSKNEQIDL 66
           D+IDLL EQ K+L+GE+A  +S LKRL +++  +P+N Q  ++   L+ EI  K  Q+  
Sbjct: 584 DEIDLLVEQVKMLAGEIAFSTSTLKRLVDQSVNDPENSQTQIQ--NLEREIHEKQRQMRG 641

Query: 67  LEKRISSHSFAS-DKTDQSGVSHTVAELIAQLNEKSFELEVKAADNRIIQEQLNQKICEF 125
           LE+ I     AS        +   V  L+ Q NEKSFELE+K+ADN I+QEQL +K  E 
Sbjct: 642 LEQLIIESGEASIANASLVEMQQKVMSLMTQCNEKSFELEIKSADNCILQEQLQEKCTEN 701

Query: 126 ESLQETVASFKQQLADALELRNFNPVDNHLQHSSVTNNYHGELHLDKGNISNANEGILLQ 185
           + L E V   +Q+L      ++     N     +V+  Y  EL               +Q
Sbjct: 702 KELHEKVNLLEQRLNAVSSEKSSPSCSNK----AVSGEYADELKKK------------IQ 745

Query: 186 SQISEIEELNQKVAELTESKEQLEIRNRKLAEESTYAKGLASAAAVELKALSEEVAKLMN 245
           SQ  E EEL  +  ++ E    L ++N+KLAEE++YAK LASAAAVELK L+ EV KL  
Sbjct: 746 SQEIENEELKLEHVQIVEENSGLRVQNQKLAEEASYAKELASAAAVELKNLASEVTKLSL 805

Query: 246 HNEKLAAELAASKNSPTQRRTSGTIQNGRRESHVKPRRNDQGG----------------- 288
            N KL  ELAA+++    R       NG    +    R+ + G                 
Sbjct: 806 QNTKLEKELAAARDLAQTRNP----MNGVNRKYNDGARSGRKGRISSSRSSGDEFDAWNL 861

Query: 289 SNSDTKRELALSKEREQSYEAALLEKNQKEAELQRKVEESKQREAYLENELANMWVLVAK 348
              D K EL + K+RE + E+AL EK   E E ++K EE+K+RE  LEN+LANMWVLVAK
Sbjct: 862 DPEDLKMELQVRKQREVALESALAEKEFIEDEYRKKAEEAKRREEALENDLANMWVLVAK 921

Query: 349 LKKSHGAETDVSGSTRG 365
           LKK +GA  + +G+  G
Sbjct: 922 LKKDNGALPEPNGTDPG 938


>AT2G21380.1 | Symbols:  | kinesin motor protein-related |
           chr2:9148913-9155963 FORWARD
          Length = 1058

 Score =  180 bits (457), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 144/356 (40%), Positives = 199/356 (55%), Gaps = 32/356 (8%)

Query: 7   DQIDLLREQHKILSGEMALHSSALKRLSEEAARNPQNGQIHVEMKRLKDEIKSKNEQIDL 66
           D++DLL EQ K+L+GE+A  +S LKRL +++  +P+N +  ++   L+++I+ K  Q+  
Sbjct: 587 DEMDLLVEQVKMLAGEIAFGTSTLKRLVDQSMNDPENSKTQIQ--NLENDIQEKQRQMKS 644

Query: 67  LEKRISSHSFASDKTDQS-GVSHTVAELIAQLNEKSFELEVKAADNRIIQEQLNQKICEF 125
           LE+RI+    AS     S  +   V  L+ Q NEKSFELE+ +ADNRI+QEQL  K  E 
Sbjct: 645 LEQRITESGEASIANASSIEMQEKVMRLMTQCNEKSFELEIISADNRILQEQLQTKCTEN 704

Query: 126 ESLQETVASFKQQLADALELRNFNPVDNHLQHSSVTNNYHGELHLDKGNISNANEGILLQ 185
             L E V   +Q+L+      +   V        VT  Y  EL               +Q
Sbjct: 705 NELHEKVHLLEQRLSSQKATLSCCDV--------VTEEYVDELKKK------------VQ 744

Query: 186 SQISEIEELNQKVAELTESKEQLEIRNRKLAEESTYAKGLASAAAVELKALSEEVAKLMN 245
           SQ  E E+L  +  +  E K  L ++N+KLAEE++YAK LASAAA+ELK L++EV KL  
Sbjct: 745 SQEIENEKLKLEHVQSVEEKSGLRVQNQKLAEEASYAKELASAAAIELKNLADEVTKLSL 804

Query: 246 HNEKLAAELA--ASKNSPTQRR-----TSGTIQNGRRESHVKPRRNDQGGSNSDT-KREL 297
            N KL  EL       +  Q+R      S   +NG R    K R +D    N +    EL
Sbjct: 805 QNAKLEKELVAARDLAAAAQKRNNNSMNSAANRNGTRPGR-KARISDSWNLNQENLTMEL 863

Query: 298 ALSKEREQSYEAALLEKNQKEAELQRKVEESKQREAYLENELANMWVLVAKLKKSH 353
              K+RE   EAAL EK   E E ++K EE+K+RE  LEN+LANMWVLVAKLKK++
Sbjct: 864 QARKQREAVLEAALAEKEYIEEEFRKKAEEAKRREEALENDLANMWVLVAKLKKAN 919


>AT1G21730.1 | Symbols:  | kinesin-related protein (MKRP1) |
           chr1:7630354-7636236 FORWARD
          Length = 890

 Score =  160 bits (406), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 112/274 (40%), Positives = 159/274 (58%), Gaps = 27/274 (9%)

Query: 1   TSTKSVDQIDLLREQHKILSGEMALHSSALKRLSEEAARNPQNGQIHVEMKRLKDEIKSK 60
           T T   DQ+DLL EQ KIL GE+AL +S+L RLSE+AARNP++  I  ++++L+DEI  K
Sbjct: 620 TGTTIADQMDLLHEQTKILVGEVALRTSSLNRLSEQAARNPEDFHIRDQIQKLEDEISEK 679

Query: 61  NEQIDLLEKRI----SSHSFASDKTDQSGVSHTVAELIAQLNEKSFELEVKAADNRIIQE 116
            +QI +LE++I        +ASD     G+   +++L  QLNEK FE E+K+ADNRI+QE
Sbjct: 680 KDQIRVLEQQIIEIFGMTPYASDSL---GMPQVLSKLTMQLNEKIFEHEIKSADNRILQE 736

Query: 117 QLNQKICEFESLQETVASFKQQLADALELRNFNPVDNHLQHSSVTNNYHG---ELHLDKG 173
           QL     E   +QET+   +QQL    E ++   +          +N +G   E++   G
Sbjct: 737 QLQMTKSENAEMQETIILLRQQLDSLAERQSTQQIAGDESSGKNIHNRNGEESEIYSGAG 796

Query: 174 NISNA----------------NEGILLQSQISEIEELNQKVAELTESKEQLEIRNRKLAE 217
             ++                 NE   L SQ  EIE L ++   L E K++L   N+KL E
Sbjct: 797 TPTSVMSLNRVFAQEETKEIYNE-TALNSQALEIENLKKEKMRLIEEKDELGKLNKKLTE 855

Query: 218 ESTYAKGLASAAAVELKALSEEVAKLMNHNEKLA 251
           E++YAK LASAAAVEL+ L+EEV +L N N KL+
Sbjct: 856 EASYAKELASAAAVELQNLAEEVTRLCNENAKLS 889