Miyakogusa Predicted Gene

chr1.LjB10L14.40.nc
Show Alignment: 
BLASTP 2.2.18 [Mar-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= chr1.LjB10L14.40.nc + phase: 0 
         (1170 letters)

Database: TAIR8_pep 
           32,825 sequences; 13,166,001 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G67230.1 | Symbols: LINC1 | LINC1 (LITTLE NUCLEI1) | chr1:251...   801   0.0  
AT1G13220.2 | Symbols: LINC2 | LINC2 (LITTLE NUCLEI2); protein b...   481   e-135
AT1G68790.1 | Symbols: LINC3 | LINC3 (LITTLE NUCLEI3) | chr1:258...   480   e-135
AT1G13220.1 | Symbols: LINC2 | LINC2 (LITTLE NUCLEI2); protein b...   248   2e-65
AT5G65770.1 | Symbols: LINC4 | LINC4 (LITTLE NUCLEI4) | chr5:263...   228   2e-59

>AT1G67230.1 | Symbols: LINC1 | LINC1 (LITTLE NUCLEI1) |
            chr1:25155224-25159695 REVERSE
          Length = 1132

 Score =  801 bits (2070), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 511/1191 (42%), Positives = 730/1191 (61%), Gaps = 80/1191 (6%)

Query: 1    MFTPQRVWQGWSLTPXXXXXXXXXXXXXXXDLGPESGDGAGSKGKGVAFVEN-GGNL--- 56
            M TP +VWQ WS TP                  P+S     S G G+  V    G +   
Sbjct: 1    MSTPLKVWQRWS-TPTKAT-------------NPDSN--GSSHGTGLDMVTPVSGRVSEI 44

Query: 57   ---DREVLVERISMLEKELYDYQYNMGLLLIEKKEWNSMYSELSQNLVEVKDALEREKAA 113
               D  +L E+IS LEKEL++YQ++MGLLLIEKKEW+S Y  L Q   EV + L++E+ A
Sbjct: 45   QFDDPRILPEKISELEKELFEYQHSMGLLLIEKKEWSSQYEALQQAFEEVNECLKQERNA 104

Query: 114  HLIALSEAEKREENLKKALGVEKECVLDLEKALREMRSEHAKIKFTAESKLVEANALTAS 173
            HLIA+++ EKREE L+KALG+EK+C LDLEKAL+E+R+E+A+IKFTA+SKL EANAL  S
Sbjct: 105  HLIAIADVEKREEGLRKALGIEKQCALDLEKALKELRAENAEIKFTADSKLTEANALVRS 164

Query: 174  IEEKSLEVEAKLRSADARLAEISRKSSEIERKSQDLEAQESALRRERLSFISEQEAHEST 233
            +EEKSLEVEAKLR+ DA+LAE+SRKSS++ERK++++EA+ES+L+RER S+I+E+EA E+T
Sbjct: 165  VEEKSLEVEAKLRAVDAKLAEVSRKSSDVERKAKEVEARESSLQRERFSYIAEREADEAT 224

Query: 234  LSKQREDLREWEKKLQEGEERLAKSQKILNEREQRANENDRICRQKEKDLEEAQKNIDAT 293
            LSKQREDLREWE+KLQEGEER+AKSQ I+ +RE RANE+D+I +QK K+LEEAQK IDA 
Sbjct: 225  LSKQREDLREWERKLQEGEERVAKSQMIVKQREDRANESDKIIKQKGKELEEAQKKIDAA 284

Query: 294  NETLRSKEDDVNSRLANITLKEKEYDSLRMNLDLKEKELSDWDEKLNAREKVEIQKLVDE 353
            N  ++  EDDV+SR+ ++ L+E+E D L+ +++ K +EL    EKL AREK+ +Q+LVDE
Sbjct: 285  NLAVKKLEDDVSSRIKDLALREQETDVLKKSIETKARELQALQEKLEAREKMAVQQLVDE 344

Query: 354  HNATLDVKKQEFGVELEEKRKSFEDGLKNRLVEVEKKEDEISHLEEKVXXXXXXXXXXXX 413
            H A LD  ++EF +E+E+KRKS +D LK+++ EVEK+E E  H+EEKV            
Sbjct: 345  HQAKLDSTQREFELEMEQKRKSIDDSLKSKVAEVEKREAEWKHMEEKVAKREQALDRKLE 404

Query: 414  XXXXXXXXXXXXXXXMXXXXXXXXXXXXXXXXXXXXIESEREELLSLKAEVEKIKAXXXX 473
                           +                    +  ++E +L+LKA VEK+      
Sbjct: 405  KHKEKENDFDLRLKGISGREKALKSEEKALETEKKKLLEDKEIILNLKALVEKVSGENQA 464

Query: 474  XXXXXXXXXXXXKVTEEERSEYLRLQSQLKHEIDQYRLQKELLLKEADDLRQQKETFERE 533
                        +VTEEERSEYLRLQ++LK +I++ R Q+ELL KEA+DL+ Q+E+FE+E
Sbjct: 465  QLSEINKEKDELRVTEEERSEYLRLQTELKEQIEKCRSQQELLQKEAEDLKAQRESFEKE 524

Query: 534  WDELDLKRADVEKELKNVIQQKEEIFKLQQFEEEKLKNEKLATEDYVQRELETLKLAKES 593
            W+ELD ++A +  ELKN+  QKE++ +    EEE+LK EK A  + ++RELETL++AK S
Sbjct: 525  WEELDERKAKIGNELKNITDQKEKLERHIHLEEERLKKEKQAANENMERELETLEVAKAS 584

Query: 594  FAVEIELQKSSLAEKAQNEKNQMLLDFELRKNELEADMQNQLEQKEKDLHERRNLFEEKR 653
            FA  +E ++S L++KA++E++Q+L D E+RK +LE+DMQ  LE+KE++L  ++ LFEE+R
Sbjct: 585  FAETMEYERSMLSKKAESERSQLLHDIEMRKRKLESDMQTILEEKERELQAKKKLFEEER 644

Query: 654  ESELDNINFLRDVANREMEEMKLQRSKLEKEKQETDENKKHLERQRTEMQEDIXXXXXXX 713
            E EL NIN+LRDVA REM +M+ +R ++EKEK E D +K HLE Q+TE+++D+       
Sbjct: 645  EKELSNINYLRDVARREMMDMQNERQRIEKEKLEVDSSKNHLEEQQTEIRKDVDDLVALT 704

Query: 714  XXXXXQREQFIIERSRFIEFVDKLRSCQNCGEMISEFVLSNLQSSADIENLEVPSLPKLA 773
                 QREQFI ERSRF+  ++  R+C  CGE++SE VL       +I+NLE+P++ KLA
Sbjct: 705  KKLKEQREQFISERSRFLSSMESNRNCSRCGELLSELVL------PEIDNLEMPNMSKLA 758

Query: 774  GDVIQGGSEVNLASSRQMTGV-PPATDPKSPVSGGTISWLRKCTSKILKISPIRKIESED 832
             +++      N A  ++M  + P A     PV+GG +SW RKCTSK+LK+SPI+  E   
Sbjct: 759  -NILD-----NEAPRQEMRDISPTAAGLGLPVTGGKVSWFRKCTSKMLKLSPIKMTEPSV 812

Query: 833  VSGSRDEATLFSEKADIEDPAGGIPGNENEVELSFAIVNDYFDARMLQSGNDIAEVEANH 892
                 D+    +E+A++  P+  +           A     FD +  +S     EVE  +
Sbjct: 813  TWNLADQEPQSTEQANVGGPSTTVQ----------AATTYSFDVQKAESETGTKEVEVTN 862

Query: 893  DPSIDNQSNIDVSKAPEDVQPSDSK--VEKQKPXXXXXXXXVKRTQTVKAVLEEAKAILG 950
              S  +QS+I+ SKA E    S S   V+ Q           +RT++VK V+++AKA+ G
Sbjct: 863  VNSDGDQSDIN-SKAQEVAADSLSNLDVDGQSRMKGKGKARTRRTRSVKDVVDDAKALYG 921

Query: 951  ES-NAAEVVPGESNAEDSANVISESQKPSNTRRPANVRKRNRVQTSQVTASGHDGDASEG 1009
            ES N  E      N +DS    +     S+     N RKR RV + +   +  DG+ S+G
Sbjct: 922  ESINLYEPNDSTENVDDSTKASTGETGRSDKAISKNGRKRGRVGSLRTCTTEQDGNESDG 981

Query: 1010 HSDSLVLGXXXXXXXXXXXPPVQ---ISRETRYNLRRPKSGATSSARAMSGGGKESEGEV 1066
             SDS+  G              Q   + +  RYNLRRP+    +   A+S   ++  G  
Sbjct: 982  KSDSVTGGAHQRKRRQKVASEQQGEVVGQ--RYNLRRPRR--VTGEPALSKKNEDIGG-- 1035

Query: 1067 DRVKDTEGNVYSKTSHSHSVGV-TNENGGSIDLEESHKVVGTQDG-YGDTART-----LS 1119
              V+  EG   ++ + + SVGV  ++NG S ++ +      ++D   G   RT     +S
Sbjct: 1036 --VQQEEGIHCTQATATASVGVAVSDNGVSTNVVQHEATADSEDTDAGSPKRTDESEAMS 1093

Query: 1120 EEVNGTADDIVEHGSEYRSESHGGVDEEDDEDYPRPGETSIGKKLWTFFTT 1170
            E+VN T           R++S G  DE D E    PG+ SIGKKLWTF TT
Sbjct: 1094 EDVNKTP---------LRADSDGEDDESDAE---HPGKVSIGKKLWTFLTT 1132


>AT1G13220.2 | Symbols: LINC2 | LINC2 (LITTLE NUCLEI2); protein
           binding | chr1:4515696-4520068 FORWARD
          Length = 1128

 Score =  481 bits (1237), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 315/778 (40%), Positives = 485/778 (62%), Gaps = 15/778 (1%)

Query: 57  DREVLVERISMLEKELYDYQYNMGLLLIEKKEWNSMYSELSQNLVEVKDALEREKAAHLI 116
           D+E L+E+IS LEKELY YQ+NMGLLL+E KE  S + +L+Q   E ++ L+RE+++HL 
Sbjct: 81  DQEALLEKISTLEKELYGYQHNMGLLLMENKELVSKHEQLNQAFQEAQEILKREQSSHLY 140

Query: 117 ALSEAEKREENLKKALGVEKECVLDLEKALREMRSEHAKIKFTAESKLVEANALTASIEE 176
           AL+  E+REENL+KALG+EK+CV +LEKALRE++ E++KI+ ++E+KLVEANAL AS+  
Sbjct: 141 ALTTVEQREENLRKALGLEKQCVQELEKALREIQEENSKIRLSSEAKLVEANALVASVNG 200

Query: 177 KSLEVEAKLRSADARLAEISRKSSEIERKSQDLEAQESALRRERLSFISEQEAHESTLSK 236
           +S +VE K+ SA+++LAE +RKSSE++ + +++E +ES L++ERLSF  E+E++E T  K
Sbjct: 201 RSSDVENKIYSAESKLAEATRKSSELKLRLKEVETRESVLQQERLSFTKERESYEGTFQK 260

Query: 237 QREDLREWEKKLQEGEERLAKSQKILNEREQRANENDRICRQKEKDLEEAQKNIDATNET 296
           QRE L EWEKKLQ  EE + + ++ LN+RE++ NE ++  + KEK+LEE  + +D +   
Sbjct: 261 QREYLNEWEKKLQGKEESITEQKRNLNQREEKVNEIEKKLKLKEKELEEWNRKVDLSMSK 320

Query: 297 LRSKEDDVNSRLANITLKEKEYDSLRMNLDLKEKELSDWDEKLNAREKVEIQKLVDEHNA 356
            +  E+D+  RL  +T KEKE  +L++ L  KE EL  ++EKL ARE  EIQKL+D+   
Sbjct: 321 SKETEEDITKRLEELTTKEKEAHTLQITLLAKENELRAFEEKLIAREGTEIQKLIDDQKE 380

Query: 357 TLDVKKQEFGVELEEKRKSFEDGLKNRLVEVEKKEDEISHLEEKVXXXXXXXXXXXXXXX 416
            L  K  EF +E EE RKS +  L+ ++ E+E+++ EI H EEK+               
Sbjct: 381 VLGSKMLEFELECEEIRKSLDKELQRKIEELERQKVEIDHSEEKLEKRNQAMNKKFDRVN 440

Query: 417 XXXXXXXXXXXXMXXXXXXXXXXXXXXXXXXXXIESEREELLSLKAEVEKIKAXXXXXXX 476
                       +                    + S++E L  L+ E+EKI+A       
Sbjct: 441 EKEMDLEAKLKTIKEREKIIQAEEKRLSLEKQQLLSDKESLEDLQQEIEKIRAEMTKKEE 500

Query: 477 XXXXXXXXXKVTEEERSEYLRLQSQLKHEIDQYRLQKELLLKEADDLRQQKETFEREWDE 536
                    ++ +EER EYLRLQS+LK +I++ R+ +E L KE ++L+Q+KE FE+EW+ 
Sbjct: 501 MIEEECKSLEIKKEEREEYLRLQSELKSQIEKSRVHEEFLSKEVENLKQEKERFEKEWEI 560

Query: 537 LDLKRADVEKELKNVIQQKEEIFKLQQFEEEKLKNEKLATEDYVQRELETLKLAKESFAV 596
           LD K+A   KE   + ++KE+  + Q  E E+LK E+ A    + +EL+ ++L +ESF  
Sbjct: 561 LDEKQAVYNKERIRISEEKEKFERFQLLEGERLKKEESALRVQIMQELDDIRLQRESFEA 620

Query: 597 EIELQKSSLAEKAQNEKNQMLLDFELRKNELEADMQNQLEQKEKDLHERRNLFEEKRESE 656
            +E ++S+L EK + E+++++ D E+ +  LE ++Q + EQ EKDL +R   FE+KR +E
Sbjct: 621 NMEHERSALQEKVKLEQSKVIDDLEMMRRNLEIELQERKEQDEKDLLDRMAQFEDKRMAE 680

Query: 657 LDNINFLRDVANREMEEMKLQRSKLEKEKQETDENKKHLERQRTEMQEDIXXXXXXXXXX 716
           L +IN  +   NREMEEM  +RS L+KE +E  ++K  L+ Q+ EM  DI          
Sbjct: 681 LSDINHQKQALNREMEEMMSKRSALQKESEEIAKHKDKLKEQQVEMHNDISELSTLSINL 740

Query: 717 XXQREQFIIERSRFIEFVDKLRSCQNCGEMISEFVLSNLQSSADIENLEVPSLPKLAG-D 775
             +RE F  ERSRF+ FV KL+ C +CG+++++FVLS+LQ  +   N EV  LP +   +
Sbjct: 741 KKRREVFGRERSRFLAFVQKLKDCGSCGQLVNDFVLSDLQLPS---NDEVAILPPIGVLN 797

Query: 776 VIQGGSEVNLASSRQMTGVPPATDPKSPVSGG----TISWLRKCTSKILKISPIRKIE 829
            + G S  N + S     +  + D  +  SGG    ++S L+KCTS I   SP +++E
Sbjct: 798 DLPGSS--NASDS---CNIKKSLDGDASGSGGSRRPSMSILQKCTSIIF--SPSKRVE 848


>AT1G68790.1 | Symbols: LINC3 | LINC3 (LITTLE NUCLEI3) |
            chr1:25838595-25842820 REVERSE
          Length = 1085

 Score =  480 bits (1236), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 395/1149 (34%), Positives = 597/1149 (51%), Gaps = 157/1149 (13%)

Query: 57   DREVLVERISMLEKELYDYQYNMGLLLIEKKEWNSMYSELSQNLVEVKDALEREKAAHLI 116
            DR+ L+E+I  LEKEL+DYQ+NMGLLLIEKK+W S  +EL Q   E  + L+REK ++ I
Sbjct: 59   DRDALIEKILKLEKELFDYQHNMGLLLIEKKQWTSTNNELQQAYDEAMEMLKREKTSNAI 118

Query: 117  ALSEAEKREENLKKALGVEKECVLDLEKALREMRSEHAKIKFTAESKLVEANALTASIEE 176
             L+EA+KREENL+KAL  EK+ V +LE  L+  + EH+ +K T+E+KL EANAL   ++E
Sbjct: 119  TLNEADKREENLRKALIDEKQFVAELENDLKYWQREHSVVKSTSEAKLEEANALVIGMKE 178

Query: 177  KSLEVEAKLRSADARLAEISRKSSEIERKSQDLEAQESALRRERLSFISEQEAHESTLSK 236
            K+LEV+ +   A+ + + ++RKSSE+ERK +++E +E   +RE LS ++E+EAHE+   K
Sbjct: 179  KALEVDRERAIAEEKFSVMNRKSSELERKLKEVETREKVHQREHLSLVTEREAHEAVFYK 238

Query: 237  QREDLREWEKKLQEGEERLAKSQKILNEREQRANENDRICRQKEKDLEEAQKNIDATNET 296
            QREDL+EWEKKL   E+RL++ ++ +N RE+R  EN+R   +KEK LE  Q+ I      
Sbjct: 239  QREDLQEWEKKLTLEEDRLSEVKRSINHREERVMENERTIEKKEKILENLQQKISVAKSE 298

Query: 297  LRSKEDDVNSRLANITLKEKEYDSLRMNLDLKEKELSDWDEKLNAREKVEIQKLVDEHNA 356
            L  KE+ +  +L +I+LKEK++++++  +D+KEKEL +++E L  RE++EI KL+D+  A
Sbjct: 299  LTEKEESIKIKLNDISLKEKDFEAMKAKVDIKEKELHEFEENLIEREQMEIGKLLDDQKA 358

Query: 357  TLDVKKQEFGVELEEKRKSFEDGLKNRLVEVEKKEDEISHLEEKVXXXXXXXXXXXXXXX 416
             LD +++EF +ELE+ R+S ++ L+ +  E+E+ + EISH EEK+               
Sbjct: 359  VLDSRRREFEMELEQMRRSLDEELEGKKAEIEQLQVEISHKEEKLAKREAALEKKEEGVK 418

Query: 417  XXXXXXXXXXXXMXXXXXXXXXXXXXXXXXXXXIESEREELLSLKAEVEKIKAXXXXXXX 476
                        +                    +  ++E L  LK E+E+I         
Sbjct: 419  KKEKDLDARLKTVKEKEKALKAEEKKLHMENERLLEDKECLRKLKDEIEEIGTETTKQES 478

Query: 477  XXXXXXXXXKVTEEERSEYLRLQSQLKHEIDQYRLQKELLLKEADDLRQQKETFEREWDE 536
                     ++T+EER E+LRLQS+LK +ID+ + ++ELLLKE ++L+Q KE FE+EW+ 
Sbjct: 479  RIREEHESLRITKEERVEFLRLQSELKQQIDKVKQEEELLLKEREELKQDKERFEKEWEA 538

Query: 537  LDLKRADVEKELKNVIQQKEEIFKLQQFEEEKLKNEKLATEDYVQRELETLKLAKESFAV 596
            LD KRA++ +E   V ++ E++  LQ  E+ +LK E++ + D ++REL+ +K+ KESF  
Sbjct: 539  LDKKRANITREQNEVAEENEKLRNLQISEKHRLKREEMTSRDNLKRELDGVKMQKESFEA 598

Query: 597  EIELQKSSLAEKAQNEKNQMLLDFELRKNELEADMQNQLEQKEKDLHERRNLFEEKRESE 656
            ++E                   D E++K  L+ + Q Q E  E+D +ER   +E++ + E
Sbjct: 599  DME-------------------DLEMQKRNLDMEFQRQEEAGERDFNERARTYEKRSQEE 639

Query: 657  LDNINFLRDVANREMEEMKLQRSKLEKEKQETDENKKHLERQRTEMQEDIXXXXXXXXXX 716
            LDNIN+ + +A REMEEM+ ++  LE+E+++    KK L+ Q  EM +DI          
Sbjct: 640  LDNINYTKKLAQREMEEMQYEKLALEREREQISVRKKLLKEQEAEMHKDITELDVLRSSL 699

Query: 717  XXQREQFIIERSRFIEFVDKLRSCQNCGEMISEFVLSNLQSSADIENLEVPSLPKLAGDV 776
              +R++FI ER RF+ F++KL+SC +CGE+   FVLS+L+   D+E+          GD 
Sbjct: 700  KEKRKEFICERERFLVFLEKLKSCSSCGEITENFVLSDLR-LPDVED----------GDK 748

Query: 777  IQGGSEVNLASSRQMTGVPPATDPKSPVSGGTISWLRKCTSKILKISPIRKIESEDVSGS 836
              G     L +   +   P A + K        S L K  SK+L ISPI         G 
Sbjct: 749  RFGKQ--KLKAEEALNISPSAENSKR------TSLLGKIASKLLSISPI---------GK 791

Query: 837  RDEATLFSEKADIEDPAGGIPGNENEVELSFAIVNDYFDARMLQSGNDIAEVEANHDPSI 896
             D+ T       ++ P    P             +D  D     SG D       H+PS 
Sbjct: 792  TDKVTDLG--ITVKLPESSQP-------------DDSLDR---VSGED-------HEPSA 826

Query: 897  DNQSNID--VSKAPEDVQPSDSKVEK----QKPXXXXXXXXVKRTQTVKAVLEEAKAILG 950
              QS  D  + + PE    S+ K +K    +            R+Q  KAV         
Sbjct: 827  TEQSFTDSRIQEGPEGSLQSEMKSDKPRRGRGRGRGRGKSVRGRSQATKAV--------- 877

Query: 951  ESNAAEVVPGESNAEDSANVISESQKPSNTRRPANVRKRNRVQTSQVTASGH-DGDASEG 1009
                                 S   KPS+   P   RKR R QTS++T S    GD+ EG
Sbjct: 878  ---------------------SRDSKPSDGETP---RKRQREQTSRITESEQAAGDSDEG 913

Query: 1010 HSDSLVLGXXXXXXXXXXXPPVQISRETRYNLRRPKSGATSSARAMSGGGKESEGEVDRV 1069
              DS+  G           P  Q   +TRY LRR ++  T   +A +  G   + E  RV
Sbjct: 914  -VDSITTG-GRRKKRQIAVPVSQTPGQTRYQLRRHRNVGTEEDKAQASKGATEKQE--RV 969

Query: 1070 KDTEGNVYS-KTSHSHSVGVTNENGGSIDLEE--SHKVVGTQDG-----YGDTARTLSE- 1120
             D    V S K + +   G   ENG +  L E  +H+ + T +        +T +   E 
Sbjct: 970  NDDIRKVPSPKETRTPPEGENRENGKAEVLVETVTHEEIVTVETETVFKVNNTGKNPVED 1029

Query: 1121 ---EVNGTADDIVEHGSEYRSESHGGVDEEDDEDYP---------------RPG-ETSIG 1161
               EV G+  +I EHG            EEDDE+                 R G + SIG
Sbjct: 1030 PQLEVGGSG-EIREHG------------EEDDENISMIEEENEGEEEEETERQGNDASIG 1076

Query: 1162 KKLWTFFTT 1170
            KK+W FFTT
Sbjct: 1077 KKIWVFFTT 1085


>AT1G13220.1 | Symbols: LINC2 | LINC2 (LITTLE NUCLEI2); protein
           binding | chr1:4515657-4517412 FORWARD
          Length = 391

 Score =  248 bits (633), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 145/289 (50%), Positives = 216/289 (74%)

Query: 57  DREVLVERISMLEKELYDYQYNMGLLLIEKKEWNSMYSELSQNLVEVKDALEREKAAHLI 116
           D+E L+E+IS LEKELY YQ+NMGLLL+E KE  S + +L+Q   E ++ L+RE+++HL 
Sbjct: 94  DQEALLEKISTLEKELYGYQHNMGLLLMENKELVSKHEQLNQAFQEAQEILKREQSSHLY 153

Query: 117 ALSEAEKREENLKKALGVEKECVLDLEKALREMRSEHAKIKFTAESKLVEANALTASIEE 176
           AL+  E+REENL+KALG+EK+CV +LEKALRE++ E++KI+ ++E+KLVEANAL AS+  
Sbjct: 154 ALTTVEQREENLRKALGLEKQCVQELEKALREIQEENSKIRLSSEAKLVEANALVASVNG 213

Query: 177 KSLEVEAKLRSADARLAEISRKSSEIERKSQDLEAQESALRRERLSFISEQEAHESTLSK 236
           +S +VE K+ SA+++LAE +RKSSE++ + +++E +ES L++ERLSF  E+E++E T  K
Sbjct: 214 RSSDVENKIYSAESKLAEATRKSSELKLRLKEVETRESVLQQERLSFTKERESYEGTFQK 273

Query: 237 QREDLREWEKKLQEGEERLAKSQKILNEREQRANENDRICRQKEKDLEEAQKNIDATNET 296
           QRE L EWEKKLQ  EE + + ++ LN+RE++ NE ++  + KEK+LEE  + +D +   
Sbjct: 274 QREYLNEWEKKLQGKEESITEQKRNLNQREEKVNEIEKKLKLKEKELEEWNRKVDLSMSK 333

Query: 297 LRSKEDDVNSRLANITLKEKEYDSLRMNLDLKEKELSDWDEKLNAREKV 345
            +  E+D+  RL  +T KEKE  +L++ L  KE EL  ++EKL ARE V
Sbjct: 334 SKETEEDITKRLEELTTKEKEAHTLQITLLAKENELRAFEEKLIAREGV 382


>AT5G65770.1 | Symbols: LINC4 | LINC4 (LITTLE NUCLEI4) |
           chr5:26328813-26332836 FORWARD
          Length = 1037

 Score =  228 bits (581), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 226/812 (27%), Positives = 391/812 (48%), Gaps = 51/812 (6%)

Query: 55  NLDREVLVERISMLEKELYDYQYNMGLLLIEKKEWNSMYSELSQNLVEVKDALEREKAAH 114
           N D+  L+  I+ LE E+YDYQ+NMGLLL+EK E +S Y E+  ++ E      REK+A+
Sbjct: 56  NRDKAALIAYIAKLESEVYDYQHNMGLLLLEKNELSSQYEEIKASVDESDLTHMREKSAY 115

Query: 115 LIALSEAEKREENLKKALGVEKECVLDLEKALREMRSEHAKIKFTAESKLVEANALTASI 174
           + AL+EA+KREE+LKK +G+ KEC+  LEK L EMR+E A+ K +A S + EA+ +    
Sbjct: 116 VSALAEAKKREESLKKDVGIAKECISSLEKTLHEMRAECAETKVSAGSTMSEAHVMIEDA 175

Query: 175 EEKSLEVEAKLRSADARLAEISRKSSEIERKSQDLEAQESALRRERLSFISEQEAHESTL 234
            +K  + EAK+R+A+A  AE +R     ERK +++E++E  L R   SF SE E  E+ +
Sbjct: 176 LKKLADAEAKMRAAEALQAEANRYHRIAERKLKEVESREDDLTRRLASFKSECETKENEM 235

Query: 235 SKQREDLREWEKKLQEGEERLAKSQKILNEREQRANENDRICRQKEKDLEEAQKNIDATN 294
             +R+ L E  K LQ+  ERL  +Q  LN+RE       +   + EK L+ A+   +   
Sbjct: 236 VIERQTLNERRKSLQQEHERLLDAQVSLNQREDHIFARSQELAELEKGLDTAKTTFEEER 295

Query: 295 ETLRSKEDDVNSRLANITLKEK----EYDSLRM-----------------------NLDL 327
           +    K+ ++   LA    +E+     ++SL                         +L  
Sbjct: 296 KAFEDKKSNLEIALALCAKREEVCFYSHNSLLFLVLHYRSSKKFLGDKIAVSERESSLLK 355

Query: 328 KEKELSDWDEKLNAREKVEIQKLVDEHNATLDVKKQEFGVELEEKRKSFEDGLKNRLVEV 387
           KE+EL   +EK+ ++E   IQ ++      L  +K +   ELE K KS E  ++++    
Sbjct: 356 KEQELLVAEEKIASKESELIQNVLANQEVILRKRKSDVEAELECKSKSVEVEIESKRRAW 415

Query: 388 EKKEDEISHLEEKVXXXXXXXXXXXXXXXXXXXXXXXXXXXMXXXXXXXXXXXXXXXXXX 447
           E +E +I   E+ V                           +                  
Sbjct: 416 ELREVDIKQREDLVGEKEHDLEVQSRALAEKEKDITEKSFNLDEKEKNLVATEEDINRKT 475

Query: 448 XXIESEREELLSLKAEVEKIKAXXXXXXXXXXXXXXXXKVTEEERSEYLRLQSQLKHEID 507
             +E E+E L  L  E+++                   +  + E SE   L+ +LK E+D
Sbjct: 476 TMLEDEKERLRKLDLELQQSLTSLEDKRKRVDSATQKLEALKSETSELSTLEMKLKEELD 535

Query: 508 QYRLQKELLLKEADDLRQQKETFEREWDELDLKRADVEKELKNVIQQKEEIFKLQQFEEE 567
             R QK  +L EAD L+ +K  FE EW+ +D+KR ++ KE + + +Q+E      + E +
Sbjct: 536 DLRAQKLEMLAEADRLKVEKAKFEAEWEHIDVKREELRKEAEYITRQREAFSMYLKDERD 595

Query: 568 KLKNEKLATEDYVQRELETLKLAKESFAVEIELQKSSLAEKAQNEKNQMLLDFELRKNEL 627
            +K E+ A  +  + ++E+L   +E F  ++  + S    K Q E+   LL  E++K EL
Sbjct: 596 NIKEERDALRNQHKNDVESLNREREEFMNKMVEEHSEWLSKIQRERADFLLGIEMQKREL 655

Query: 628 EADMQNQLEQKEKDLHERRNLFEEKRESELDNINFLRDVANREMEEMKLQRSKLEKEKQE 687
           E  ++N+ E+ E    +R   FE++++ E + I  L+++A +E+E ++++  +L+ E+ E
Sbjct: 656 EYCIENKREELENSSRDREKAFEQEKKLEEERIQSLKEMAEKELEHVQVELKRLDAERLE 715

Query: 688 TDENKKHLERQRTEMQEDIXXXXXXXXXXXXQREQFIIERSRFIEFVDKLRSCQNCGEMI 747
              +++  ER+  E+++ +            QR     ER      +++L+  +N    +
Sbjct: 716 IKLDRERREREWAELKDSVEELKVQREKLETQRHMLRAERDEIRHEIEELKKLENLKVAL 775

Query: 748 SEFVLSNLQSSADIENLEVP--SLPKLAGDVIQGGSEVNLASSRQMTGVPPATDPK---- 801
            +  ++ +Q S    NLE     +  L   V+    E++L +     GV   ++ +    
Sbjct: 776 DDMSMAKMQLS----NLERSWEKVSALKQKVVSRDDELDLQN-----GVSTVSNSEDGYN 826

Query: 802 ---------SPVSGGTISWLRKCTSKILKISP 824
                    +P S    SW+++CT+ I K SP
Sbjct: 827 SSMERQNGLTPSSATPFSWIKRCTNLIFKTSP 858