Miyakogusa Predicted Gene
- chr1.CM0433.300.nd
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr1.CM0433.300.nd + phase: 0 /partial
(613 letters)
Database: TAIR8_pep
32,825 sequences; 13,166,001 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G31880.1 | Symbols: | binding | chr4:15419441-15423945 REVERSE 353 1e-97
AT1G15940.1 | Symbols: | binding | chr1:5473666-5478044 FORWARD 260 2e-69
AT1G80810.1 | Symbols: | binding | chr1:30370467-30373790 FORWARD 236 2e-62
AT1G80810.2 | Symbols: | binding | chr1:30370467-30373790 FORWARD 236 2e-62
AT5G47690.3 | Symbols: | binding | chr5:19335125-19344240 FORWARD 188 8e-48
AT5G47690.1 | Symbols: | binding | chr5:19335125-19344240 FORWARD 188 9e-48
AT5G47690.2 | Symbols: | binding | chr5:19335125-19344240 FORWARD 188 9e-48
AT1G77600.1 | Symbols: | binding | chr1:29157784-29167856 REVERSE 111 1e-24
AT4G32970.1 | Symbols: | similar to unknown protein [Arabidopsi... 44 3e-04
>AT4G31880.1 | Symbols: | binding | chr4:15419441-15423945 REVERSE
Length = 873
Score = 353 bits (907), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 223/501 (44%), Positives = 299/501 (59%), Gaps = 59/501 (11%)
Query: 15 AGNELADPPSSAEELLSILERVESYLSKIEQTPNESMQTALSPTLKALTGEIFLKHSDAD 74
AG +L DPPSS +ELLS L+++ L+++EQ+P +SMQ AL+P +K L G KHSD D
Sbjct: 15 AGEKLIDPPSSLDELLSFLDKLFVSLAEVEQSPPDSMQNALTPLMKGLVGGKLFKHSDVD 74
Query: 75 VKVAVASCLSEITRITAPDAPYDDDEMKEVFQLIVSSFENLHDKSSRSYAKKLSMLETVA 134
VKVAVA+C+SEITRITAPDAPYDDD+MKEVF+LIVSSFE+L DKSSRSYAK++S+LETVA
Sbjct: 75 VKVAVAACISEITRITAPDAPYDDDQMKEVFKLIVSSFEDLVDKSSRSYAKRISILETVA 134
Query: 135 KVRSCVVMLDLECDHLILEMFQHFLKEIREHHPEDVFSSMETVMTLVLEESEDISMDLLC 194
KVRSCVVMLDLECD L++EMFQHFLK IR+HH +VFSSME +MTLVLEESEDI ++L
Sbjct: 135 KVRSCVVMLDLECDALLIEMFQHFLKAIRDHHSGNVFSSMENIMTLVLEESEDIPSEMLS 194
Query: 195 PLLATFKKDNEEVSPIALQLVERVLENCATKLQPYLVQAVKTLGISVDD-SKILAKICQD 253
P+L + KKD+ E+S ++ +L E+VL NCA+KL+ YL +AVK+ G+ +D S I+A IC+
Sbjct: 195 PILHSVKKDD-EISQVSRRLAEQVLSNCASKLKTYLTEAVKSSGVPLDKYSNIVASICEG 253
Query: 254 ASDSFEKNDVCV-----SSEHVAAKGD---ATEAEHSQQDNPNGNRSPKSVMSNGVACVR 305
+ +++ V S H+ + + A E ++ + + S KS +SNGVA
Sbjct: 254 TFSALQQDQVVANEKEDSQGHIKRETEVEKAAEISTPERTDAPKDESGKSGVSNGVAQQN 313
Query: 306 EDNALADSKSNKQEDTDCSGHSESLDVSGQRELNNLDAEKVDNDGGXXXXXXXXXXXXXX 365
+ + DS KQ+DT + LD +LNN EK D
Sbjct: 314 DSSVDTDSM-KKQDDTGAKDEPQQLDNPRNTDLNNTTEEKPD------------------ 354
Query: 366 XXXXXXXXXVKAGSQGQVVAH---EKEAEKPSVVAG--SQDQVDADEKEAEKRLDS-EAP 419
V H EKE E SV S+D +E E + LDS +
Sbjct: 355 ------------------VEHQIEEKENESSSVKQADLSKDSDIKEETEPAELLDSKDVL 396
Query: 420 SSPHEDHSVEAAGPTEEDEETHANISSPEACNDDSEVKGSPSTSENLPNKNHSKKLGKAK 479
+SP D SV AA +E ++ I + D++ SPS +E LP ++ KK K
Sbjct: 397 TSPPVDSSVTAATSSENEKNKSVQILPSKTSGDETANVSSPSMAEELPEQSVPKKTANQK 456
Query: 480 MKED------PAKEGAAEDVS 494
KE P+ A E+VS
Sbjct: 457 KKESSTEEVKPSASIATEEVS 477
>AT1G15940.1 | Symbols: | binding | chr1:5473666-5478044 FORWARD
Length = 990
Score = 260 bits (665), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 128/239 (53%), Positives = 175/239 (73%), Gaps = 1/239 (0%)
Query: 15 AGNELADPPSSAEELLSILERVESYLSKIEQTPNESMQTALSPTLKALTGEIFLKHSDAD 74
A L P S + LS+LE +ES L+ +EQ + S+Q AL P ++AL L++ D+D
Sbjct: 19 AAENLLKPHFSTDATLSLLEVMESLLATVEQDLSSSVQKALHPPMRALVSADLLRNPDSD 78
Query: 75 VKVAVASCLSEITRITAPDAPYDDDEMKEVFQLIVSSFENLHDKSSRSYAKKLSMLETVA 134
V+V+V SCL+EI RITAP+APY+D++MK++FQ+ + +FE L D SSRSY K +LETVA
Sbjct: 79 VRVSVVSCLTEIMRITAPEAPYNDEQMKDIFQVTIEAFEKLADASSRSYRKAEVILETVA 138
Query: 135 KVRSCVVMLDLECDHLILEMFQHFLKEIREHHPEDVFSSMETVMTLVLEESEDISMDLLC 194
KVRS +VMLDLECD L+LEMFQ FLK IR HP+ V SMET+M V++ESE++ MDLL
Sbjct: 139 KVRSSLVMLDLECDDLVLEMFQRFLKIIRPDHPQLVLVSMETIMITVIDESEEVPMDLLE 198
Query: 195 PLLATFKKDNEEVSPIALQLVERVLENCATKLQPYLVQAVKTLGISVD-DSKILAKICQ 252
LL T KKD+++VSP AL LVE+VL +C KLQP +++A+K+ G S+D S +++ ICQ
Sbjct: 199 ILLTTVKKDSQDVSPAALTLVEKVLSSCTCKLQPCIMEALKSSGTSLDMYSPVVSSICQ 257
>AT1G80810.1 | Symbols: | binding | chr1:30370467-30373790 FORWARD
Length = 773
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 110/203 (54%), Positives = 150/203 (73%), Gaps = 1/203 (0%)
Query: 51 MQTALSPTLKALTGEIFLKHSDADVKVAVASCLSEITRITAPDAPYDDDEMKEVFQLIVS 110
MQ+AL P+ AL L H D+DV+V+V SCL+EI RITAP+ PY DD MKE+F+L +
Sbjct: 1 MQSALIPSRNALVSVDLLSHPDSDVRVSVVSCLTEIVRITAPETPYSDDLMKEIFRLTIE 60
Query: 111 SFENLHDKSSRSYAKKLSMLETVAKVRSCVVMLDLECDHLILEMFQHFLKEIREHHPEDV 170
+FE L D SSRSY K +L+ VAKV+SC+VMLDLEC LIL+MF++F K IR HP+ V
Sbjct: 61 AFEKLADASSRSYKKAEFVLDNVAKVKSCLVMLDLECYDLILQMFRNFFKFIRSDHPQLV 120
Query: 171 FSSMETVMTLVLEESEDISMDLLCPLLATFKKDNEEVSPIALQLVERVLENCATKLQPYL 230
FSSME +M +++E+E +S DLL LLAT KK+N+ VSP++ L E+VL CA KL+PY+
Sbjct: 121 FSSMELIMIAIIDETEQVSTDLLDSLLATVKKENQNVSPMSWSLAEKVLSRCARKLKPYI 180
Query: 231 VQAVKTLGISVD-DSKILAKICQ 252
++A+K+ G S+D S +++ ICQ
Sbjct: 181 IEALKSRGTSLDMYSPVVSSICQ 203
>AT1G80810.2 | Symbols: | binding | chr1:30370467-30373790 FORWARD
Length = 774
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 110/203 (54%), Positives = 150/203 (73%), Gaps = 1/203 (0%)
Query: 51 MQTALSPTLKALTGEIFLKHSDADVKVAVASCLSEITRITAPDAPYDDDEMKEVFQLIVS 110
MQ+AL P+ AL L H D+DV+V+V SCL+EI RITAP+ PY DD MKE+F+L +
Sbjct: 1 MQSALIPSRNALVSVDLLSHPDSDVRVSVVSCLTEIVRITAPETPYSDDLMKEIFRLTIE 60
Query: 111 SFENLHDKSSRSYAKKLSMLETVAKVRSCVVMLDLECDHLILEMFQHFLKEIREHHPEDV 170
+FE L D SSRSY K +L+ VAKV+SC+VMLDLEC LIL+MF++F K IR HP+ V
Sbjct: 61 AFEKLADASSRSYKKAEFVLDNVAKVKSCLVMLDLECYDLILQMFRNFFKFIRSDHPQLV 120
Query: 171 FSSMETVMTLVLEESEDISMDLLCPLLATFKKDNEEVSPIALQLVERVLENCATKLQPYL 230
FSSME +M +++E+E +S DLL LLAT KK+N+ VSP++ L E+VL CA KL+PY+
Sbjct: 121 FSSMELIMIAIIDETEQVSTDLLDSLLATVKKENQNVSPMSWSLAEKVLSRCARKLKPYI 180
Query: 231 VQAVKTLGISVD-DSKILAKICQ 252
++A+K+ G S+D S +++ ICQ
Sbjct: 181 IEALKSRGTSLDMYSPVVSSICQ 203
>AT5G47690.3 | Symbols: | binding | chr5:19335125-19344240 FORWARD
Length = 1607
Score = 188 bits (478), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 102/212 (48%), Positives = 146/212 (68%)
Query: 16 GNELADPPSSAEELLSILERVESYLSKIEQTPNESMQTALSPTLKALTGEIFLKHSDADV 75
G++L P S + LL +L+ LS++EQ+P ++ ++ P L A+ L H D DV
Sbjct: 13 GSKLDLAPVSKDSLLKLLKEAAVCLSELEQSPPPAVLKSIQPFLDAVIKPEILNHQDKDV 72
Query: 76 KVAVASCLSEITRITAPDAPYDDDEMKEVFQLIVSSFENLHDKSSRSYAKKLSMLETVAK 135
K+ VASC+SEITRITAP+APY D+ MK++FQLIVS+F L+D S S+ +++ +LETVAK
Sbjct: 73 KLLVASCVSEITRITAPEAPYSDNIMKDIFQLIVSAFAGLNDVSGPSFGRRVLILETVAK 132
Query: 136 VRSCVVMLDLECDHLILEMFQHFLKEIREHHPEDVFSSMETVMTLVLEESEDISMDLLCP 195
RSCVVMLDLECD L+ E+F FL R+ HPE VFSSM+ +M ++LEESED+ LL
Sbjct: 133 YRSCVVMLDLECDDLVKEVFTTFLDVARDDHPEIVFSSMQNIMIVLLEESEDVQEHLLLI 192
Query: 196 LLATFKKDNEEVSPIALQLVERVLENCATKLQ 227
LL+ ++ +V A +L +V+E+CA K++
Sbjct: 193 LLSKLGRNRSDVRDAARRLAMKVIEHCAPKVE 224
>AT5G47690.1 | Symbols: | binding | chr5:19335125-19344240 FORWARD
Length = 1605
Score = 188 bits (477), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 102/212 (48%), Positives = 146/212 (68%)
Query: 16 GNELADPPSSAEELLSILERVESYLSKIEQTPNESMQTALSPTLKALTGEIFLKHSDADV 75
G++L P S + LL +L+ LS++EQ+P ++ ++ P L A+ L H D DV
Sbjct: 13 GSKLDLAPVSKDSLLKLLKEAAVCLSELEQSPPPAVLKSIQPFLDAVIKPEILNHQDKDV 72
Query: 76 KVAVASCLSEITRITAPDAPYDDDEMKEVFQLIVSSFENLHDKSSRSYAKKLSMLETVAK 135
K+ VASC+SEITRITAP+APY D+ MK++FQLIVS+F L+D S S+ +++ +LETVAK
Sbjct: 73 KLLVASCVSEITRITAPEAPYSDNIMKDIFQLIVSAFAGLNDVSGPSFGRRVLILETVAK 132
Query: 136 VRSCVVMLDLECDHLILEMFQHFLKEIREHHPEDVFSSMETVMTLVLEESEDISMDLLCP 195
RSCVVMLDLECD L+ E+F FL R+ HPE VFSSM+ +M ++LEESED+ LL
Sbjct: 133 YRSCVVMLDLECDDLVKEVFTTFLDVARDDHPEIVFSSMQNIMIVLLEESEDVQEHLLLI 192
Query: 196 LLATFKKDNEEVSPIALQLVERVLENCATKLQ 227
LL+ ++ +V A +L +V+E+CA K++
Sbjct: 193 LLSKLGRNRSDVRDAARRLAMKVIEHCAPKVE 224
>AT5G47690.2 | Symbols: | binding | chr5:19335125-19344240 FORWARD
Length = 1606
Score = 188 bits (477), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 102/212 (48%), Positives = 146/212 (68%)
Query: 16 GNELADPPSSAEELLSILERVESYLSKIEQTPNESMQTALSPTLKALTGEIFLKHSDADV 75
G++L P S + LL +L+ LS++EQ+P ++ ++ P L A+ L H D DV
Sbjct: 13 GSKLDLAPVSKDSLLKLLKEAAVCLSELEQSPPPAVLKSIQPFLDAVIKPEILNHQDKDV 72
Query: 76 KVAVASCLSEITRITAPDAPYDDDEMKEVFQLIVSSFENLHDKSSRSYAKKLSMLETVAK 135
K+ VASC+SEITRITAP+APY D+ MK++FQLIVS+F L+D S S+ +++ +LETVAK
Sbjct: 73 KLLVASCVSEITRITAPEAPYSDNIMKDIFQLIVSAFAGLNDVSGPSFGRRVLILETVAK 132
Query: 136 VRSCVVMLDLECDHLILEMFQHFLKEIREHHPEDVFSSMETVMTLVLEESEDISMDLLCP 195
RSCVVMLDLECD L+ E+F FL R+ HPE VFSSM+ +M ++LEESED+ LL
Sbjct: 133 YRSCVVMLDLECDDLVKEVFTTFLDVARDDHPEIVFSSMQNIMIVLLEESEDVQEHLLLI 192
Query: 196 LLATFKKDNEEVSPIALQLVERVLENCATKLQ 227
LL+ ++ +V A +L +V+E+CA K++
Sbjct: 193 LLSKLGRNRSDVRDAARRLAMKVIEHCAPKVE 224
>AT1G77600.1 | Symbols: | binding | chr1:29157784-29167856 REVERSE
Length = 1285
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 121/225 (53%), Gaps = 33/225 (14%)
Query: 36 VESYLSKIEQTPNES--------MQTALSPTLKALTGEIFLKHSDADVKVAVASCLSEIT 87
V + LSKI+Q P+ + ++ L P K++ LK+ D DV + V C+SE+
Sbjct: 21 VANTLSKIDQ-PSATNKEKGLKLIEAELRPLKKSIIKHALLKNRDNDVSLLVTVCVSELF 79
Query: 88 RITAPDAPYDDDEMKEVFQLIVSSFENLHDKSSRSYAKKLSMLETVAKVRSCVVMLDLEC 147
RI AP P++D+ ++++F L ++ F L D S ++K+ +LETV++++ C++MLD +C
Sbjct: 80 RILAPHLPFEDEYLRDIFTLFIAEFSELSDTVSPYFSKRAKILETVSRLKFCLLMLDEDC 139
Query: 148 DHLILEMFQHFLKEIREHHPE----------------------DVFSSMETVMTLVLEES 185
L+ EMF F +REHH + +F+++ +M+ VLEE
Sbjct: 140 QDLVHEMFNMFFSLVREHHQQSLINQKSMKTQQRKANTQQTQHSLFNNILAIMSDVLEEE 199
Query: 186 EDISMDLLCPLLATFKKDNEEVSPIALQLVERVLENCATKLQPYL 230
+ S ++ +L K+ E+ + A +L ++E CA +L+P +
Sbjct: 200 ANSSFVVV--ILENLVKEGEDTTSGADKLASSLIERCADRLEPLI 242
>AT4G32970.1 | Symbols: | similar to unknown protein [Arabidopsis
thaliana] (TAIR:AT4G32960.1); similar to unnamed protein
product [Vitis vinifera] (GB:CAO43777.1); contains
domain Tudor/PWWP/MBT (SSF63748); contains domain
ANDROGEN INDUCED INHIBITOR OF PROLIFERATION (AS3) /
PDS5-RELATED (PTHR12663) | chr4:15910348-15914303
REVERSE
Length = 750
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Query: 183 EESEDISMDLLCPLLATFKKDNEEVSPIALQLVERVLENCATKLQPYLVQAVKTLGISV- 241
E+S + +L P KKD+E V I+ + E+VL NCA++++ YL +A K +S+
Sbjct: 343 EQSTNKQSKMLSPFPPNVKKDDE-VPQISRRQAEQVLSNCASQIKKYLTEAGKLSSVSLA 401
Query: 242 DDSKILAKICQDASDSFEKNDV 263
+ S ++ IC A D+ ++ DV
Sbjct: 402 NPSDVVDSICGRAFDALKQEDV 423