Miyakogusa Predicted Gene
- chr1.CM0375.440.nc
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr1.CM0375.440.nc - phase: 0
(540 letters)
Database: TAIR8_pep
32,825 sequences; 13,166,001 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G54610.1 | Symbols: HAG1, HAT1, ATGCN5, HAC3, HAG01, BGT, GCN... 686 0.0
AT2G34900.1 | Symbols: IMB1 | IMB1 (IMBIBITION-INDUCIBLE 1); DNA... 73 5e-13
AT2G34900.2 | Symbols: IMB1 | IMB1 (IMBIBITION-INDUCIBLE 1); DNA... 72 1e-12
AT5G63330.2 | Symbols: | DNA-binding bromodomain-containing pro... 71 1e-12
AT5G63330.1 | Symbols: | DNA-binding bromodomain-containing pro... 71 1e-12
AT1G76380.3 | Symbols: | DNA-binding bromodomain-containing pro... 69 8e-12
AT1G76380.2 | Symbols: | DNA-binding bromodomain-containing pro... 69 1e-11
AT1G76380.1 | Symbols: | DNA-binding bromodomain-containing pro... 69 1e-11
AT3G01770.1 | Symbols: ATBET10 | ATBET10 (ARABIDOPSIS THALIANA B... 67 2e-11
AT5G14270.1 | Symbols: ATBET9 | ATBET9 (ARABIDOPSIS THALIANA BRO... 66 6e-11
AT1G20670.1 | Symbols: | DNA-binding bromodomain-containing pro... 64 2e-10
AT5G46550.1 | Symbols: | DNA-binding bromodomain-containing pro... 64 2e-10
AT3G27260.1 | Symbols: GTE8 | GTE8 (GLOBAL TRANSCRIPTION FACTOR ... 64 2e-10
AT5G55040.2 | Symbols: | similar to DNA-binding bromodomain-con... 62 7e-10
AT5G55040.1 | Symbols: | DNA binding | chr5:22344953-22348929 R... 62 7e-10
AT3G52280.1 | Symbols: GTE6 | GTE6 (GENERAL TRANSCRIPTION FACTOR... 60 5e-09
AT1G17790.1 | Symbols: | DNA-binding bromodomain-containing pro... 58 2e-08
AT1G73150.1 | Symbols: | DNA-binding bromodomain-containing pro... 57 2e-08
AT5G10550.1 | Symbols: GTE2 | GTE2 (GLOBAL TRANSCRIPTION FACTOR ... 57 4e-08
AT5G65630.1 | Symbols: GTE7 | GTE7 (GLOBAL TRANSCRIPTION FACTOR ... 57 4e-08
AT1G06230.2 | Symbols: GTE4 | GTE4 (GLOBAL TRANSCRIPTION FACTOR ... 53 5e-07
AT1G06230.1 | Symbols: GTE4 | GTE4 (GLOBAL TRANSCRIPTION FACTOR ... 53 5e-07
AT1G05910.1 | Symbols: | cell division cycle protein 48-related... 47 2e-05
AT1G58025.1 | Symbols: | DNA binding | chr1:21461884-21465422 R... 46 5e-05
AT1G32750.1 | Symbols: TAF1, HAF1, HAC13, GTD1, HAF01 | HAF01 (H... 46 8e-05
>AT3G54610.1 | Symbols: HAG1, HAT1, ATGCN5, HAC3, HAG01, BGT, GCN5 |
GCN5 (HISTONE ACETYLTRANSFERASE OF THE GNAT FAMILY 1);
H3 histone acetyltransferase | chr3:20224571-20228353
FORWARD
Length = 568
Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/537 (64%), Positives = 404/537 (75%), Gaps = 29/537 (5%)
Query: 31 IHKRKLV---------SEDHVPPFPPSSFS---ADTRDGALTSNDDLESISARGXXX--- 75
+HKRKL SEDH PP S ADTRDGALTSND+LESISARG
Sbjct: 34 LHKRKLAATTAANAAASEDHAPPSSSFPPSSFSADTRDGALTSNDELESISARGADTDSD 93
Query: 76 --XXXXXXXXXXXXXXXXXXXXXXXMRTFTASRLNNKPT---APRNSKLKSDNHSASVKI 130
+RTFTA+RL++ + RN+KLK++ S++VK+
Sbjct: 94 PDESEDIVVDDDEDEFAPEQDQDSSIRTFTAARLDSSSGVNGSSRNTKLKTE--SSTVKL 151
Query: 131 ENTDAAKDXXXXXXXXXXXXXXXXXXXX----KEDATKIFTDNLQTSGAYSAREESLKKE 186
E++D KD K+++ K+ +N QTSGAY AREE+LK+E
Sbjct: 152 ESSDGGKDGGSSVVGTGVSGTVGGSSISGLVPKDESVKVLAENFQTSGAYIAREEALKRE 211
Query: 187 EEAGKLKFVCLSNDGVDEHMIWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRRH 246
E+AG+LKFVC SND +DEHM+ LIGLKNIFARQLPNMPKEYIVRL+MDR HKSVMV+R +
Sbjct: 212 EQAGRLKFVCYSNDSIDEHMMCLIGLKNIFARQLPNMPKEYIVRLLMDRKHKSVMVLRGN 271
Query: 247 -VVGGITYRPYVSQRFGEIAFCAITADEQVKGYGTRLMNHLKQFAREEDGLTHFLTYADN 305
VVGGITYRPY SQ+FGEIAFCAITADEQVKGYGTRLMNHLKQ AR+ DGLTHFLTYADN
Sbjct: 272 LVVGGITYRPYHSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADN 331
Query: 306 NAVGYFIKQGFTKEIHLEKERWQGYIKDYDGGILMECKIDQKLPYTDLSTMIRRQRQAID 365
NAVGYF+KQGFTKEI+LEK+ W G+IKDYDGG+LMECKID KLPYTDLS+MIR+QR+AID
Sbjct: 332 NAVGYFVKQGFTKEIYLEKDVWHGFIKDYDGGLLMECKIDPKLPYTDLSSMIRQQRKAID 391
Query: 366 EKIRELSNCHIVYAGIDFQKKEAGVPKKII--DDIPGLREAGWTPDQWGHSRFRSLSGCT 423
E+IRELSNC VY I+F K EAG+P+KII ++I GLREAGWTPDQWGH+RF+ +G
Sbjct: 392 ERIRELSNCQNVYPKIEFLKNEAGIPRKIIKVEEIRGLREAGWTPDQWGHTRFKLFNGSA 451
Query: 424 DNATNQKHLTAFMRSLLKSMHDHADAWPFKEPVDGRDVPDYYDIIKDPMDLKTMSKRVES 483
D TNQK L A MR+LLK+M DHADAWPFKEPVD RDVPDYYDIIKDP+DLK ++KRVES
Sbjct: 452 DMVTNQKQLNALMRALLKTMQDHADAWPFKEPVDSRDVPDYYDIIKDPIDLKVIAKRVES 511
Query: 484 EQYYVTFEMFVADVRRMFANARTYNSPETIYYKCASRLEAHFQSKVTAGLQSGPKIQ 540
EQYYVT +MFVAD RRMF N RTYNSP+TIYYKCA+RLE HF SKV AGLQSG K Q
Sbjct: 512 EQYYVTLDMFVADARRMFNNCRTYNSPDTIYYKCATRLETHFHSKVQAGLQSGAKSQ 568
>AT2G34900.1 | Symbols: IMB1 | IMB1 (IMBIBITION-INDUCIBLE 1); DNA
binding | chr2:14730412-14732641 REVERSE
Length = 386
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 61/106 (57%), Gaps = 8/106 (7%)
Query: 430 KHLTA--FMR---SLLKSMHDHADAWPFKEPVD--GRDVPDYYDIIKDPMDLKTMSKRVE 482
KH+++ MR ++ + + H AWPF EPVD G + DYY +I+ PMDL T+ K++E
Sbjct: 103 KHVSSPDLMRQFATMFRQIAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKME 162
Query: 483 SEQYYVTFEMFVADVRRMFANARTYNSPETIYYKCASRLEAHFQSK 528
S +Y E++ ADVR +F NA YN + Y A L F+ K
Sbjct: 163 SSEYSNVREIY-ADVRLVFKNAMRYNEEKEDVYVMAESLLEKFEEK 207
>AT2G34900.2 | Symbols: IMB1 | IMB1 (IMBIBITION-INDUCIBLE 1); DNA
binding | chr2:14730412-14731879 REVERSE
Length = 276
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 438 SLLKSMHDHADAWPFKEPVD--GRDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFEMFVA 495
++ + + H AWPF EPVD G + DYY +I+ PMDL T+ K++ES +Y E++ A
Sbjct: 6 TMFRQIAQHKWAWPFLEPVDVKGLGLHDYYKVIEKPMDLGTIKKKMESSEYSNVREIY-A 64
Query: 496 DVRRMFANARTYNSPETIYYKCASRLEAHFQSK 528
DVR +F NA YN + Y A L F+ K
Sbjct: 65 DVRLVFKNAMRYNEEKEDVYVMAESLLEKFEEK 97
>AT5G63330.2 | Symbols: | DNA-binding bromodomain-containing
protein | chr5:25394406-25396009 REVERSE
Length = 477
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 438 SLLKSMHDHADAWPFKEPVDG--RDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFEMFVA 495
+LL + H WPF+ PVD ++PDY+++IK PMDL T+ R+ +Y + F A
Sbjct: 167 TLLNRLWSHKSGWPFRTPVDPVMLNIPDYFNVIKHPMDLGTIRSRLCKGEYSSPLD-FAA 225
Query: 496 DVRRMFANARTYNSPETIYYKCASRLEAHFQS 527
DVR F+N+ YN P ++ A + +F+S
Sbjct: 226 DVRLTFSNSIAYNPPGNQFHTMAQGISKYFES 257
>AT5G63330.1 | Symbols: | DNA-binding bromodomain-containing
protein | chr5:25394406-25396009 REVERSE
Length = 477
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 3/92 (3%)
Query: 438 SLLKSMHDHADAWPFKEPVDG--RDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFEMFVA 495
+LL + H WPF+ PVD ++PDY+++IK PMDL T+ R+ +Y + F A
Sbjct: 167 TLLNRLWSHKSGWPFRTPVDPVMLNIPDYFNVIKHPMDLGTIRSRLCKGEYSSPLD-FAA 225
Query: 496 DVRRMFANARTYNSPETIYYKCASRLEAHFQS 527
DVR F+N+ YN P ++ A + +F+S
Sbjct: 226 DVRLTFSNSIAYNPPGNQFHTMAQGISKYFES 257
>AT1G76380.3 | Symbols: | DNA-binding bromodomain-containing
protein | chr1:28656310-28659430 REVERSE
Length = 579
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
Query: 452 FKEPVDGRDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFEMFVADVRRMFANARTYNSPE 511
+ +P D ++PDYY+IIK+PMD T+ K++ES Y T E F A+V + NA YNS +
Sbjct: 165 YSDPADPEELPDYYEIIKNPMDFTTLRKKLESGA-YTTLEQFEANVFLICTNAMEYNSAD 223
Query: 512 TIYYKCA 518
T+YY+ A
Sbjct: 224 TVYYRQA 230
>AT1G76380.2 | Symbols: | DNA-binding bromodomain-containing
protein | chr1:28656310-28659430 REVERSE
Length = 580
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 452 FKEPVDGRDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFEMFVADVRRMFANARTYNSPE 511
+ +P D ++PDYY+IIK+PMD T+ K++ES Y T E F DV + NA YNS +
Sbjct: 166 YSDPADPEELPDYYEIIKNPMDFTTLRKKLES-GAYTTLEQFEQDVFLICTNAMEYNSAD 224
Query: 512 TIYYKCA 518
T+YY+ A
Sbjct: 225 TVYYRQA 231
>AT1G76380.1 | Symbols: | DNA-binding bromodomain-containing
protein | chr1:28656310-28659430 REVERSE
Length = 579
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 452 FKEPVDGRDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFEMFVADVRRMFANARTYNSPE 511
+ +P D ++PDYY+IIK+PMD T+ K++ES Y T E F DV + NA YNS +
Sbjct: 165 YSDPADPEELPDYYEIIKNPMDFTTLRKKLES-GAYTTLEQFEQDVFLICTNAMEYNSAD 223
Query: 512 TIYYKCA 518
T+YY+ A
Sbjct: 224 TVYYRQA 230
>AT3G01770.1 | Symbols: ATBET10 | ATBET10 (ARABIDOPSIS THALIANA
BROMODOMAIN AND EXTRATERMINAL DOMAIN PROTEIN 10); DNA
binding | chr3:275589-278393 REVERSE
Length = 620
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 55/108 (50%), Gaps = 9/108 (8%)
Query: 438 SLLKSMHDHADAWPFKEPVD--GRDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFEMFVA 495
SLLK + W F PVD ++PDY+ IIK PMDL T+ ++ S Y E F A
Sbjct: 135 SLLKRLMSQQHCWLFNTPVDVVKLNIPDYFTIIKHPMDLGTVKSKLTSGTYSSPSE-FSA 193
Query: 496 DVRRMFANARTYNSPETIYYKCASRLEAHFQ------SKVTAGLQSGP 537
DVR F NA TYN + Y+ A L F+ K ++G +S P
Sbjct: 194 DVRLTFRNAMTYNPSDNNVYRFADTLSKFFEVRWKTIEKKSSGTKSEP 241
>AT5G14270.1 | Symbols: ATBET9 | ATBET9 (ARABIDOPSIS THALIANA
BROMODOMAIN AND EXTRATERMINAL DOMAIN PROTEIN 9); DNA
binding | chr5:4605176-4608520 FORWARD
Length = 688
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 438 SLLKSMHDHADAWPFKEPVD--GRDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFEMFVA 495
+LLK + H W F PVD ++ DY+++I+ PMDL T+ ++ S Y E F A
Sbjct: 143 ALLKRLMSHQYGWVFNTPVDVVKLNILDYFNVIEHPMDLGTVKNKLTSGTYSCPSE-FAA 201
Query: 496 DVRRMFANARTYNSPETIYYKCASRLEAHFQ 526
DVR F+NA TYN P Y A L F+
Sbjct: 202 DVRLTFSNAMTYNPPGNDVYVMADTLRKFFE 232
>AT1G20670.1 | Symbols: | DNA-binding bromodomain-containing
protein | chr1:7164527-7167923 REVERSE
Length = 652
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 452 FKEPVDGRDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFEMFVADVRRMFANARTYNSPE 511
+ +PVD ++PDY++IIK+PMD T+ +++S Y T E F DV + NA YNS +
Sbjct: 196 YSDPVDPEELPDYFEIIKNPMDFSTLRNKLDS-GAYSTLEQFERDVFLICTNAMEYNSAD 254
Query: 512 TIYYKCASRLE 522
T+YY+ A ++
Sbjct: 255 TVYYRQARAIQ 265
>AT5G46550.1 | Symbols: | DNA-binding bromodomain-containing
protein | chr5:18901666-18903730 REVERSE
Length = 494
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 3/73 (4%)
Query: 438 SLLKSMHDHADAWPFKEPVD--GRDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFEMFVA 495
+LL+ + +H W FKEPVD ++PDY+++I+ PMDL T+ ++ + Y + F A
Sbjct: 75 ALLRFLMEHRGGWLFKEPVDPVKMEIPDYFNVIQKPMDLGTVKSKL-LKNVYSNADEFAA 133
Query: 496 DVRRMFANARTYN 508
DVR FANA YN
Sbjct: 134 DVRLTFANAMHYN 146
>AT3G27260.1 | Symbols: GTE8 | GTE8 (GLOBAL TRANSCRIPTION FACTOR
GROUP E8); DNA binding | chr3:10069648-10073640 FORWARD
Length = 813
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 54/114 (47%), Gaps = 5/114 (4%)
Query: 401 LREAGWTPDQWGHSRFRSLSGCTDNATNQKHLTAFMR--SLLKSMHDHADAWPFKEPVD- 457
+R T W + T+ ++T + +LL+ + H +W F+ PVD
Sbjct: 143 VRHQNGTSRGWNRGTSGKFESSKETMTSTPNITLMKQCDTLLRKLWSHPHSWVFQAPVDV 202
Query: 458 -GRDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFEMFVADVRRMFANARTYNSP 510
++PDY IK PMDL T+ K + S Y E F ADVR F NA TYN P
Sbjct: 203 VKLNIPDYLTTIKHPMDLGTVKKNLASGVYSSPHE-FAADVRLTFTNAMTYNPP 255
>AT5G55040.2 | Symbols: | similar to DNA-binding
bromodomain-containing protein [Arabidopsis thaliana]
(TAIR:AT1G20670.1); similar to unnamed protein product
[Vitis vinifera] (GB:CAO38940.1); contains InterPro
domain Bromodomain (InterPro:IPR001487) |
chr5:22344953-22348929 REVERSE
Length = 916
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 452 FKEPVDGRDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFEMFVADVRRMFANARTYNSPE 511
+ EPVD ++PDY+D+I+ PMD T+ K++ + Y T E +DV + +NA YNS +
Sbjct: 207 YAEPVDPEELPDYHDMIEHPMDFSTVRKKL-ANGSYSTLEELESDVLLICSNAMQYNSSD 265
Query: 512 TIYYKCASRLE 522
T+YYK A ++
Sbjct: 266 TVYYKQARTIQ 276
>AT5G55040.1 | Symbols: | DNA binding | chr5:22344953-22348929
REVERSE
Length = 916
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Query: 452 FKEPVDGRDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFEMFVADVRRMFANARTYNSPE 511
+ EPVD ++PDY+D+I+ PMD T+ K++ + Y T E +DV + +NA YNS +
Sbjct: 207 YAEPVDPEELPDYHDMIEHPMDFSTVRKKL-ANGSYSTLEELESDVLLICSNAMQYNSSD 265
Query: 512 TIYYKCASRLE 522
T+YYK A ++
Sbjct: 266 TVYYKQARTIQ 276
>AT3G52280.1 | Symbols: GTE6 | GTE6 (GENERAL TRANSCRIPTION FACTOR
GROUP E6); DNA binding | chr3:19400081-19402267 REVERSE
Length = 369
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 61/119 (51%), Gaps = 12/119 (10%)
Query: 430 KHLTAFMR---SLLKSMHDHADAWPFKEPV--DGRDVPDYYDIIKDPMDLKTMSKRVESE 484
K + MR ++ + + H AWPF PV +G + DY+++I PMD T+ ++E++
Sbjct: 89 KRMQDLMRQFGTIFRQITQHKCAWPFMHPVNVEGLGLHDYFEVIDKPMDFSTIKNQMEAK 148
Query: 485 Q---YYVTFEMFVADVRRMFANARTYNSPETIYYKCASRLEAHFQSKVTAGLQSGPKIQ 540
Y +++ AD+R +F NA YN + Y A +L F+ K L PK+Q
Sbjct: 149 DGTGYKHVMQIY-ADMRLVFENAMNYNEETSDVYSMAKKLLEKFEEKWAHFL---PKVQ 203
>AT1G17790.1 | Symbols: | DNA-binding bromodomain-containing
protein | chr1:6125525-6127269 REVERSE
Length = 487
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 438 SLLKSMHDHADAWPFKEPVD--GRDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFEMFVA 495
SLL + H AW F PVD G + DY++I+K+PMDL T+ ++ Y + F
Sbjct: 138 SLLTKLMKHKSAWVFNVPVDAKGLGLHDYHNIVKEPMDLGTVKTKLGKSLYKSPLD-FAE 196
Query: 496 DVRRMFANARTYNSPETIYYKCASRLEAHFQSK 528
DVR F NA YN Y+ A L F+ K
Sbjct: 197 DVRLTFNNAILYNPIGHDVYRFAELLLNMFEDK 229
>AT1G73150.1 | Symbols: | DNA-binding bromodomain-containing
protein | chr1:27507988-27509657 REVERSE
Length = 461
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 71/174 (40%), Gaps = 22/174 (12%)
Query: 357 IRRQRQAIDEKIRELSNCHIVYAGIDFQKKEAGVPKKIIDDIPGLREAGWTPDQWGHSRF 416
++R+ QA E++R L + G +F A VP K + G ++ G
Sbjct: 63 LKRKLQAELEEVRSLIK-RLEPQGNNF----APVPNKKLKTANGGKKGGVHGAAADKGTV 117
Query: 417 RSLSGCTDNATNQKHLTAFMRSLLKSMHDHADAWPFKEPVD--GRDVPDYYDIIKDPMDL 474
+ L C + LL + H W F PVD + DY++IIK+PMDL
Sbjct: 118 QILKSCNN--------------LLTKLMKHKSGWIFNTPVDVVTLGLHDYHNIIKEPMDL 163
Query: 475 KTMSKRVESEQYYVTFEMFVADVRRMFANARTYNSPETIYYKCASRLEAHFQSK 528
T+ R+ Y E F DVR F NA YN Y A L F+ K
Sbjct: 164 GTVKTRLSKSLYKSPLE-FAEDVRLTFNNAMLYNPVGHDVYHMAEILLNLFEEK 216
>AT5G10550.1 | Symbols: GTE2 | GTE2 (GLOBAL TRANSCRIPTION FACTOR
GROUP E 2); DNA binding | chr5:3332856-3335233 REVERSE
Length = 678
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 60/129 (46%), Gaps = 16/129 (12%)
Query: 412 GHSRFRSLSGCTDNATNQKHLTAFMRS--LLKSMH-----------DHADAWPFKEPVD- 457
GH + RS TD + ++H+ + S +LKSM H +W F PVD
Sbjct: 216 GHGQKRSNPFATDEPSLKRHVALDLMSEKVLKSMMTTCGQILVKLMKHKWSWVFLNPVDV 275
Query: 458 -GRDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFEMFVADVRRMFANARTYNSPETIYYK 516
G + DY+ I+ PMDL T+ +E Y + F +DVR F NA +YN Y
Sbjct: 276 VGLGLHDYHRIVDKPMDLGTVKMNLEKGLYRSPID-FASDVRLTFTNAMSYNPKGQDVYL 334
Query: 517 CASRLEAHF 525
A +L + F
Sbjct: 335 MAEKLLSQF 343
>AT5G65630.1 | Symbols: GTE7 | GTE7 (GLOBAL TRANSCRIPTION FACTOR
GROUP E 7); DNA binding | chr5:26243537-26245483 REVERSE
Length = 590
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 47/89 (52%), Gaps = 3/89 (3%)
Query: 439 LLKSMHDHADAWPFKEPVD--GRDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFEMFVAD 496
+L + H AW F PVD G + DY+ ++K PMDL T+ ++ + +YV+ F D
Sbjct: 176 ILVKLMKHKWAWVFNTPVDVVGLGLHDYHQVVKKPMDLGTVKLNLD-KGFYVSPIDFATD 234
Query: 497 VRRMFANARTYNSPETIYYKCASRLEAHF 525
VR F NA TYN Y A +L HF
Sbjct: 235 VRLTFDNAMTYNPKGQDVYFMADKLLDHF 263
>AT1G06230.2 | Symbols: GTE4 | GTE4 (GLOBAL TRANSCRIPTION FACTOR
GROUP E 4); DNA binding | chr1:1907625-1910182 FORWARD
Length = 766
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 430 KHLTAFMRSLLKSMHDHADAWPFKEPVD--GRDVPDYYDIIKDPMDLKTMSKRVESEQYY 487
K+ +A + L+K H W F PVD G + DYY II+ PMDL T+ K + Y
Sbjct: 423 KNCSALLERLMKHKH----GWVFNAPVDVKGLGLLDYYTIIEHPMDLGTI-KSALMKNLY 477
Query: 488 VTFEMFVADVRRMFANARTYN 508
+ F DVR F NA TYN
Sbjct: 478 KSPREFAEDVRLTFHNAMTYN 498
>AT1G06230.1 | Symbols: GTE4 | GTE4 (GLOBAL TRANSCRIPTION FACTOR
GROUP E 4); DNA binding | chr1:1907625-1910182 FORWARD
Length = 766
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 430 KHLTAFMRSLLKSMHDHADAWPFKEPVD--GRDVPDYYDIIKDPMDLKTMSKRVESEQYY 487
K+ +A + L+K H W F PVD G + DYY II+ PMDL T+ K + Y
Sbjct: 423 KNCSALLERLMKHKH----GWVFNAPVDVKGLGLLDYYTIIEHPMDLGTI-KSALMKNLY 477
Query: 488 VTFEMFVADVRRMFANARTYN 508
+ F DVR F NA TYN
Sbjct: 478 KSPREFAEDVRLTFHNAMTYN 498
>AT1G05910.1 | Symbols: | cell division cycle protein 48-related /
CDC48-related | chr1:1790795-1796502 FORWARD
Length = 1210
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Query: 452 FKEPVDGRDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFEMFVADVRRMFANARTYNSPE 511
F PV D P+Y II+ PMD T+ +RV++ Q Y+T F+ DV + NA+ YN +
Sbjct: 918 FHFPVTDEDAPNYRSIIQIPMDTATLLQRVDTGQ-YLTCTPFLQDVDLIVRNAKAYNGDD 976
Query: 512 TIYYKCASR 520
+ SR
Sbjct: 977 YAGARIVSR 985
>AT1G58025.1 | Symbols: | DNA binding | chr1:21461884-21465422
REVERSE
Length = 572
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 439 LLKSMHDHADAWPFKEPV--DGRDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFEMFVAD 496
++K + A PF PV + +PDY+DIIK PMD T+ E Y+ E D
Sbjct: 222 VIKKIMKMEAADPFNVPVNPEALGIPDYFDIIKTPMDFGTICNNFEKGNKYMNSEDVYKD 281
Query: 497 VRRMFANARTYNSPETIYYKCASRLEAHFQSK-VTAGL 533
V ++ N YN R++ +F +AGL
Sbjct: 282 VNYIWNNCSKYNKKGDYIVDLMKRVKKNFMKYWTSAGL 319
>AT1G32750.1 | Symbols: TAF1, HAF1, HAC13, GTD1, HAF01 | HAF01
(HISTONE ACETYLTRANSFERASE OF THE TAFII250 FAMILY 1); DNA
binding | chr1:11846365-11856241 REVERSE
Length = 1919
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 452 FKEPVDGRDVPDYYDIIKDPMDLKTMSKRVESEQYYVTFEMFVADVRRMFANARTYN 508
F +PV ++ PDY DI+++PMDL T+ +V +Y E F DV ++ NA YN
Sbjct: 1824 FLKPVSKKEAPDYLDIVENPMDLSTIRDKVRKIEYR-NREQFRHDVWQIKYNAHLYN 1879