Miyakogusa Predicted Gene
- chr1.CM0284.500.nc
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr1.CM0284.500.nc - phase: 0
(609 letters)
Database: TAIR8_pep
32,825 sequences; 13,166,001 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT1G01790.1 | Symbols: ATKEA1, KEA1 | KEA1 (K EFFLUX ANTIPORTER ... 274 1e-73
>AT1G01790.1 | Symbols: ATKEA1, KEA1 | KEA1 (K EFFLUX ANTIPORTER 1);
potassium:hydrogen antiporter | chr1:284781-290869
FORWARD
Length = 1193
Score = 274 bits (700), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 179/377 (47%), Positives = 233/377 (61%), Gaps = 41/377 (10%)
Query: 153 SVDELKELLQRALKELEVAQINSTMFEEKVKKISETAIFLHDEAARSWSEVNSTLDTIQE 212
S++ELKELL +A+KELEVA++NSTMFEEK ++ISE AI L DEAA +W +VN TLD I++
Sbjct: 140 SLEELKELLHKAIKELEVARLNSTMFEEKAQRISERAIALKDEAATAWLDVNKTLDVIRD 199
Query: 213 IANEEHTAKEAVQNATMALSVAEARLQVALDSLEVA--KEVPDSEKGSDEGTGDKDMAEK 270
EE AKEAVQ ATMALS+AEARLQV ++SLE ++P + ++E D+ +K
Sbjct: 200 TVYEEALAKEAVQTATMALSLAEARLQVIVESLEAGAGNDIPHVSEETEETI---DVNDK 256
Query: 271 GKSLFNAQEDIKQCQTHLANCEAELRRLQSRKEELQTEVSKLQEIAEKAQLNAVKAEEDV 330
++L A++DIK+CQ +L NCE++L L S+K+ELQ EV KL E AE Q++++KAEEDV
Sbjct: 257 EEALLAAKDDIKECQVNLDNCESQLSALLSKKDELQKEVDKLNEFAETIQISSLKAEEDV 316
Query: 331 TNIMLLAEQAVAFELEATQRVNDAEIALQRADKSVSNLNADTTESIQVQDVESVSEDEKV 390
TNIM LAEQAVAFELEATQRVNDAEIALQRA+KS+S Q+ D E+ ED V
Sbjct: 317 TNIMKLAEQAVAFELEATQRVNDAEIALQRAEKSLSISQTPEETQGQLSDEETSQEDAMV 376
Query: 391 DQGFSSDAT--VE----RNGDLATDDESLLPKLSPETLSEKTSHLEDITQSDNLSDNENG 444
G D T VE ++GDL + +L P+ + ++ L TQ SD+ENG
Sbjct: 377 LSGNVEDVTHQVEKESPKDGDLPV--VQITAELVPDIVGQRNKKL---TQPYESSDHENG 431
Query: 445 --------------------VQTKKQETQKDLTRDSSPF-APKALLKKXXXXXXXXXXXX 483
VQTKKQETQKDL ++ S +PKA K
Sbjct: 432 KPSVESSKVVEADSEKPKINVQTKKQETQKDLPKEGSSLNSPKASFNKSSRFFSASFFSS 491
Query: 484 TEDGAEFTPTSVFEALV 500
DG +VF +LV
Sbjct: 492 NPDGT----ATVFGSLV 504