Miyakogusa Predicted Gene
- chr1.CM0017.200.nc
BLASTP 2.2.18 [Mar-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= chr1.CM0017.200.nc + phase: 0
(322 letters)
Database: TAIR8_pep
32,825 sequences; 13,166,001 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT3G12500.1 | Symbols: PR3, PR-3, CHI-B, B-CHI, ATHCHIB | ATHCHI... 425 e-119
AT4G01700.1 | Symbols: | chitinase, putative | chr4:732413-7334... 318 2e-87
AT1G02360.1 | Symbols: | chitinase, putative | chr1:472138-4731... 310 1e-84
AT1G05850.1 | Symbols: ERH2, ELP1, CTL1, ELP, HOT2, POM1 | POM1 ... 183 1e-46
AT3G16920.1 | Symbols: | chitinase | chr3:5776669-5777892 REVERSE 175 3e-44
AT2G43610.1 | Symbols: | glycoside hydrolase family 19 protein ... 172 2e-43
AT3G54420.1 | Symbols: ATCHITIV, CHIV, ATEP3 | ATEP3 (Arabidopsi... 172 2e-43
AT2G43570.1 | Symbols: | chitinase, putative | chr2:18083466-18... 167 8e-42
AT2G43620.1 | Symbols: | chitinase, putative | chr2:18101031-18... 164 5e-41
AT2G43590.1 | Symbols: | chitinase, putative | chr2:18088669-18... 163 2e-40
AT2G43580.1 | Symbols: | chitinase, putative | chr2:18085894-18... 146 1e-35
AT1G56680.1 | Symbols: | glycoside hydrolase family 19 protein ... 125 3e-29
AT2G43600.1 | Symbols: | glycoside hydrolase family 19 protein ... 121 5e-28
AT3G47540.1 | Symbols: | chitinase, putative | chr3:17532029-17... 96 4e-20
AT3G04720.1 | Symbols: HEL, PR-4, PR4 | PR4 (PATHOGENESIS-RELATE... 44 1e-04
>AT3G12500.1 | Symbols: PR3, PR-3, CHI-B, B-CHI, ATHCHIB | ATHCHIB
(BASIC CHITINASE); chitinase | chr3:3962508-3963952
REVERSE
Length = 322
Score = 425 bits (1092), Expect = e-119, Method: Compositional matrix adjust.
Identities = 201/293 (68%), Positives = 232/293 (79%), Gaps = 6/293 (2%)
Query: 25 EQCGSQAGGALCPGGICCSKYGWCGSTSEYXX-----XXXXXXXXXXXXXXXXXXIISRD 79
EQCG QAGGALCP G+CCS++GWCG+T Y IIS
Sbjct: 21 EQCGRQAGGALCPNGLCCSEFGWCGNTEPYCKQPGCQSQCTPGGTPPGPTGDLSGIISSS 80
Query: 80 TFNTMLKHRDDGGCPAKGFYTYDAFISAAKAYPSFGTTGDTSTRKREIAAFFGQTSHETT 139
F+ MLKHR+D CPA+GFYTY+AFI+AAK++P FGTTGDT+TRK+E+AAFFGQTSHETT
Sbjct: 81 QFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFFGQTSHETT 140
Query: 140 GGWATAPDGPYAWGYCFVREQNP-SAYCSPSSQWPCASGKQYYGRGPIQITWNYNYGQCG 198
GGWATAPDGPY+WGYCF +EQNP S YC PS+ WPCASGK+YYGRGP+Q++WNYNYG CG
Sbjct: 141 GGWATAPDGPYSWGYCFKQEQNPASDYCEPSATWPCASGKRYYGRGPMQLSWNYNYGLCG 200
Query: 199 RAIGADLLNNPDAVATDAVISFKTAIWFWMTAQSPKPSCHDVITGRWSPSSADQAAGRVS 258
RAIG DLLNNPD VA DAVI+FK AIWFWMTAQ PKPSCH VI G+W PS AD+AAGR+
Sbjct: 201 RAIGVDLLNNPDLVANDAVIAFKAAIWFWMTAQPPKPSCHAVIAGQWQPSDADRAAGRLP 260
Query: 259 GYGTVTNIINGGLECGKGQDSRVQDRIGFYKRYCDLLGVGYGNNLDCASQRPF 311
GYG +TNIINGGLECG+GQD RV DRIGFY+RYC++ GV G NLDC +QR F
Sbjct: 261 GYGVITNIINGGLECGRGQDGRVADRIGFYQRYCNIFGVNPGGNLDCYNQRSF 313
>AT4G01700.1 | Symbols: | chitinase, putative | chr4:732413-733487
REVERSE
Length = 280
Score = 318 bits (816), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 142/239 (59%), Positives = 181/239 (75%), Gaps = 2/239 (0%)
Query: 75 IISRDTFNTMLKHRDDGGCPAKGFYTYDAFISAAKAYPSFGTTGDTSTRKREIAAFFGQT 134
++ R ++ + H+D+ CPAKGFY Y+AF+ A +++P FG+ G+ TR+RE+AAF Q
Sbjct: 41 LVPRTLYDQIFIHKDNNACPAKGFYPYEAFVEATRSFPKFGSVGNFWTRRREVAAFLAQI 100
Query: 135 SHETTGGWATAPDGPYAWGYCFVREQNP-SAYCSPSSQ-WPCASGKQYYGRGPIQITWNY 192
SHETTGGWATAPDGPYAWG CF E +P S YC S++ WPC SGK Y GRGPIQ++WNY
Sbjct: 101 SHETTGGWATAPDGPYAWGLCFKEEVSPQSNYCDASNKDWPCVSGKSYKGRGPIQLSWNY 160
Query: 193 NYGQCGRAIGADLLNNPDAVATDAVISFKTAIWFWMTAQSPKPSCHDVITGRWSPSSADQ 252
NYGQ GRA+G D L NP+ VA ++V++FKTA+WFWMT Q+PKPSCH+V+ R+ P+ AD+
Sbjct: 161 NYGQAGRALGFDGLQNPELVANNSVLAFKTALWFWMTEQTPKPSCHNVMVNRYRPTKADR 220
Query: 253 AAGRVSGYGTVTNIINGGLECGKGQDSRVQDRIGFYKRYCDLLGVGYGNNLDCASQRPF 311
AA R GYG VTNIINGGLECG D RV DR+G+++RY L V G NLDC +QRPF
Sbjct: 221 AANRTVGYGLVTNIINGGLECGIPGDGRVTDRVGYFQRYAQLFKVTTGPNLDCENQRPF 279
>AT1G02360.1 | Symbols: | chitinase, putative | chr1:472138-473116
REVERSE
Length = 272
Score = 310 bits (793), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 139/240 (57%), Positives = 176/240 (73%), Gaps = 2/240 (0%)
Query: 75 IISRDTFNTMLKHRDDGGCPAKGFYTYDAFISAAKAYPSFGTTGDTSTRKREIAAFFGQT 134
++ RD +N + H+D+ CPA GFYTY++F+ A + +P FG+ G T++ E+AAF Q
Sbjct: 33 LVPRDLYNKIFIHKDNTACPANGFYTYESFVQATRRFPRFGSVGSPVTQRLEVAAFLAQI 92
Query: 135 SHETTGGWATAPDGPYAWGYCFVREQNP-SAYCSPS-SQWPCASGKQYYGRGPIQITWNY 192
SHETTGGWATAPDGPYAWG CF E +P S YC S +QWPC K Y GRGPIQ++WNY
Sbjct: 93 SHETTGGWATAPDGPYAWGLCFKEEVSPQSTYCDSSDTQWPCFPNKTYQGRGPIQLSWNY 152
Query: 193 NYGQCGRAIGADLLNNPDAVATDAVISFKTAIWFWMTAQSPKPSCHDVITGRWSPSSADQ 252
NYG GRA+G D L NP+ V+ ++VI+F+TA+WFWMT QSPKPSCHDV+ G++ P++AD
Sbjct: 153 NYGPAGRALGFDGLRNPETVSNNSVIAFQTALWFWMTPQSPKPSCHDVMIGKYRPTAADL 212
Query: 253 AAGRVSGYGTVTNIINGGLECGKGQDSRVQDRIGFYKRYCDLLGVGYGNNLDCASQRPFG 312
AA R G+G TNIINGGLECG D RV DRIGF++RY L V G NLDC +QRP+
Sbjct: 213 AANRTGGFGLTTNIINGGLECGIPGDGRVNDRIGFFQRYTGLFKVATGPNLDCENQRPYA 272
>AT1G05850.1 | Symbols: ERH2, ELP1, CTL1, ELP, HOT2, POM1 | POM1
(POM-POM1); chitinase | chr1:1766832-1768116 REVERSE
Length = 321
Score = 183 bits (464), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 92/246 (37%), Positives = 141/246 (57%), Gaps = 11/246 (4%)
Query: 81 FNTMLKHRDDGGCPAKGFYTYDAFISAAKAYPS--FGTTGDTSTRKREIAAFFGQTSHET 138
F + R+ A GF+ Y +FI+AA + FGTTG ++E+AAF G + +T
Sbjct: 69 FEQLFSKRNTPIAHAVGFWDYQSFITAAALFEPLGFGTTGGKLMGQKEMAAFLGHVASKT 128
Query: 139 TGGWATAPDGPYAWGYCFVREQNP-SAYCSPS--SQWPCASGKQYYGRGPIQITWNYNYG 195
+ G+ A GP AWG C+ RE +P +YC S ++PC+ G +YYGRG + I WN+NYG
Sbjct: 129 SCGYGVATGGPLAWGLCYNREMSPMQSYCDESWKFKYPCSPGAEYYGRGALPIYWNFNYG 188
Query: 196 QCGRAIGADLLNNPDAVATDAVISFKTAIWFWMTA-QSPKPSCHDVITGRWSPSSADQAA 254
G A+ ADLLN+P+ + +A ++F+ AIW WMT + +PS HD+ G W P+ D +
Sbjct: 189 AAGEALKADLLNHPEYIEQNATLAFQAAIWRWMTPIKRAQPSAHDIFVGNWKPTKNDTLS 248
Query: 255 GRVSGYGTVTNIINGGLECGKGQDSRVQDRIGFYKRYCDLLGVGY-----GNNLDCASQR 309
R +G+ N++ G CG+G + + I Y + DL+G+G + L CA Q+
Sbjct: 249 KRGPTFGSTMNVLYGEYTCGQGSIDPMNNIISHYLYFLDLMGIGREDAGPNDELSCAEQK 308
Query: 310 PFGSNS 315
PF ++
Sbjct: 309 PFNPST 314
>AT3G16920.1 | Symbols: | chitinase | chr3:5776669-5777892 REVERSE
Length = 348
Score = 175 bits (444), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 93/243 (38%), Positives = 132/243 (54%), Gaps = 12/243 (4%)
Query: 81 FNTMLKHRDDGGCPAKGFYTYDAFISAAKAYPS--FGTTGDTSTRKREIAAFFGQTSHET 138
F + R+ A GF+ Y +FI+AA Y FGT G+ +E+AAF G +T
Sbjct: 92 FENLFSKRNSPVAHAVGFWDYRSFITAAAEYQPLGFGTAGEKLQGMKEVAAFLGHVGSKT 151
Query: 139 TGGWATAPDGPYAWGYCFVREQNPSA-YCSPSSQ--WPCASGKQYYGRGPIQITWNYNYG 195
+ G+ A GP AWG C+ +E +P YC + +PC G Y+GRG + + WNYNYG
Sbjct: 152 SCGYGVATGGPLAWGLCYNKEMSPDQLYCDDYYKLTYPCTPGVSYHGRGALPVYWNYNYG 211
Query: 196 QCGRAIGADLLNNPDAVATDAVISFKTAIWFWMT-AQSPKPSCHDVITGRWSPSSADQAA 254
Q G A+ DLL++P+ + +A ++F+ AIW WMT + PS HDV G+W P+ D AA
Sbjct: 212 QTGEALKVDLLSHPEYLENNATLAFQAAIWRWMTPPKKHLPSAHDVFVGKWKPTKNDTAA 271
Query: 255 GRVSGYGTVTNIINGGLECGKGQDS-RVQDRIGFYKRYCDLLGVGY-----GNNLDCASQ 308
R G+G N++ G C G D+ + + + Y Y DL+GVG L CA Q
Sbjct: 272 KRTPGFGATINVLYGDQICNSGFDNDEMNNIVSHYLYYLDLIGVGREEAGPHEKLSCADQ 331
Query: 309 RPF 311
PF
Sbjct: 332 EPF 334
>AT2G43610.1 | Symbols: | glycoside hydrolase family 19 protein |
chr2:18095135-18096261 REVERSE
Length = 281
Score = 172 bits (437), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 109/318 (34%), Positives = 148/318 (46%), Gaps = 60/318 (18%)
Query: 4 MKMRLGIAILVSFILVGWCRGEQCGSQAGGALCPGGICCSKYGWCGSTSEY--------- 54
+K L I + I+ G + CG+ C G +CCS++G+CG+T Y
Sbjct: 8 LKKALIIFLFTLTIMTGTAFSQNCGTNG----CKGNMCCSRWGYCGTTKAYCGTGCQSGP 63
Query: 55 -------XXXXXXXXXXXXXXXXXXXXIISRDTFNTMLKHRDDGGCPAKGFYTYDAFISA 107
+I+ FN+++ + GCPAKGFYT AFI+A
Sbjct: 64 CNSKPKPTPTPSGSGGLNAGPRGTIASVITPAFFNSIM-SKVGSGCPAKGFYTRQAFIAA 122
Query: 108 AKAYPSFGTTGDTSTRKREIAAFFGQTSHETTGGWATAPDGPYAWGYCFVREQNPSAYCS 167
A+++ ++ T KREIAA Q SHE+ +C+ E YCS
Sbjct: 123 AESFAAYKGT----VAKREIAAMLAQFSHES-------------GSFCYKEEIARGRYCS 165
Query: 168 PSSQWPCASGKQYYGRGPIQITWNYNYGQCGRAIGADLLNNPDAVATDAVISFKTAIWFW 227
PS+ +PC GK YYGRGPIQITWNYNYG G+ +G LL +PD VA ++F+ A+WFW
Sbjct: 166 PSTTYPCQPGKNYYGRGPIQITWNYNYGAAGKFLGLPLLKDPDMVARSPTVAFQCAMWFW 225
Query: 228 MTAQSPKPSCHDVITGRWSPSSADQAAGRVSGYGTVTNIINGGLECGKGQDSRVQDRIGF 287
P S G+G T INGG EC G+ + VQ R+
Sbjct: 226 NKNVRPVLS---------------------QGFGATTRRINGG-ECNGGRPAAVQSRVNH 263
Query: 288 YKRYCDLLGVGYGNNLDC 305
Y +C LGV G NL C
Sbjct: 264 YLDFCKKLGVTPGTNLSC 281
>AT3G54420.1 | Symbols: ATCHITIV, CHIV, ATEP3 | ATEP3 (Arabidopsis
thaliana chitinase class IV); chitinase |
chr3:20156913-20158012 FORWARD
Length = 273
Score = 172 bits (436), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/310 (34%), Positives = 146/310 (47%), Gaps = 48/310 (15%)
Query: 2 IKMKMRLGIAILVSFILVGWCRGEQCGSQAGGALCPGGICCSKYGWCGSTSEYXXXXXXX 61
I + L +LV + + CG C +CCS++G+CG+TS+Y
Sbjct: 6 ISKSISLVTILLVLQAFSNTTKAQNCG-------CSSELCCSQFGFCGNTSDYCGVGCQQ 58
Query: 62 ---XXXXXXXXXXXXXIISRDTFNTMLKHRDDGGCPAKGFYTYDAFISAAKAYPSFGTTG 118
I++++ FN ++ C FY+ AF+ A +Y FG G
Sbjct: 59 GPCFAPPPANGVSVAEIVTQEFFNGIISQAASS-CAGNRFYSRGAFLEALDSYSRFGRVG 117
Query: 119 DTSTRKREIAAFFGQTSHETTGGWATAPDGPYAWGYCFVREQNPSA--YCSP-SSQWPCA 175
T +REIAAFF +HET +C++ E + ++ YC ++Q+PC
Sbjct: 118 STDDSRREIAAFFAHVTHET-------------GHFCYIEEIDGASKDYCDENATQYPCN 164
Query: 176 SGKQYYGRGPIQITWNYNYGQCGRAIGADLLNNPDAVATDAVISFKTAIWFWMTAQSPKP 235
K YYGRGPIQ++WN+NYG G AIG D LN P+ VATD VISFKTA+W+W P
Sbjct: 165 PNKGYYGRGPIQLSWNFNYGPAGTAIGFDGLNAPETVATDPVISFKTALWYWTNRVQPVI 224
Query: 236 SCHDVITGRWSPSSADQAAGRVSGYGTVTNIINGGLECGKGQDSRVQDRIGFYKRYCDLL 295
S G+G ING LEC + VQ R+ +Y YC L
Sbjct: 225 S---------------------QGFGATIRAINGALECDGANTATVQARVRYYTDYCRQL 263
Query: 296 GVGYGNNLDC 305
GV GNNL C
Sbjct: 264 GVDPGNNLTC 273
>AT2G43570.1 | Symbols: | chitinase, putative |
chr2:18083466-18084512 REVERSE
Length = 277
Score = 167 bits (423), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 106/306 (34%), Positives = 149/306 (48%), Gaps = 54/306 (17%)
Query: 12 ILVSFILVGWCRGEQCGSQAGGALCPGGICCSKYGWCGSTSEYXXXXXXXXXXXXXXXXX 71
++ I + + SQ G C CCSKYG+CG+T E+
Sbjct: 14 FFITLIFLILTVSKPVASQNCG--CASDFCCSKYGYCGTTDEFCGEGCQAGPCRSSGGGG 71
Query: 72 XXXI-----ISRDTFNTMLKHRDDGGCPAKGFYTYDAFISAAKAYPSFGTTGDTSTRKRE 126
+ ++ D FN++L R D CP KGFYT+D F++AA +YPSFG S KRE
Sbjct: 72 DPAVSLEGTVTPDFFNSILNQRGD--CPGKGFYTHDTFMAAANSYPSFGA----SISKRE 125
Query: 127 IAAFFGQTSHETTGGWATAPDGPYAWGYCFVREQNPSA------YC-SPSSQWPCASGKQ 179
IAAFF + ET G+ C++ E + A YC + ++PCA GK
Sbjct: 126 IAAFFAHVAQET--GF-----------MCYIEEIDGPAKAASGEYCDTEKPEFPCAQGKG 172
Query: 180 YYGRGPIQITWNYNYGQCGRAIGADLLNNPDAVATDAVISFKTAIWFWMTAQSPKPSCHD 239
YYGRG IQ++WNYNYG CG+A+ +LL +P+ VA D V++FKTA WFW T
Sbjct: 173 YYGRGAIQLSWNYNYGLCGKALDENLLASPEKVAQDQVLAFKTAFWFWTT---------- 222
Query: 240 VITGRWSPSSADQAAGRVSGYGTVTNIINGGLECGKGQDSRVQDRIGFYKRYCDLLGVGY 299
+ SG+G +N G ++ +RI +++ YC LGV
Sbjct: 223 -----------NVRTSFKSGFGATIRAVNSRECSGGDSTAKAANRIKYFQDYCGKLGVAP 271
Query: 300 GNNLDC 305
G+NL C
Sbjct: 272 GDNLTC 277
>AT2G43620.1 | Symbols: | chitinase, putative |
chr2:18101031-18102102 REVERSE
Length = 283
Score = 164 bits (416), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 109/322 (33%), Positives = 146/322 (45%), Gaps = 62/322 (19%)
Query: 1 MIKMKMRLGIAILVSFILVGWCRGEQCGSQAGGALCPGGICCSKYGWCGSTSEYX----- 55
M+K L + L I+ +QCG+ C +CCS+YG+CG+T Y
Sbjct: 7 MLKNAFILFLFTLT--IMAKTVFSQQCGTTG----CAANLCCSRYGYCGTTDAYCGTGCR 60
Query: 56 ----XXXXXXXXXXXXXXXXXXXIISRDTFNTM--------LKHRDDGGCPAKGFYTYDA 103
RDT + + + GCPAKGFYT A
Sbjct: 61 SGPCSSSTTPIPPTPSGGAGGLNADPRDTIENVVTPAFFDGIMSKVGNGCPAKGFYTRQA 120
Query: 104 FISAAKAYPSFGTTGDTSTRKREIAAFFGQTSHETTGGWATAPDGPYAWGYCFVREQNPS 163
FI+AA+++ ++ T KREIAA Q SHE+ +C+ E
Sbjct: 121 FIAAAQSFDAYKGT----VAKREIAAMLAQFSHES-------------GSFCYKEEIARG 163
Query: 164 AYCSPSSQWPCASGKQYYGRGPIQITWNYNYGQCGRAIGADLLNNPDAVATDAVISFKTA 223
YCSPS+ +PC GK YYGRGPIQITWNYNYG G+ +G LL +PD VA ++F+ A
Sbjct: 164 KYCSPSTAYPCTPGKDYYGRGPIQITWNYNYGAAGKFLGLPLLTDPDMVARSPQVAFQCA 223
Query: 224 IWFWMTAQSPKPSCHDVITGRWSPSSADQAAGRVSGYGTVTNIINGGLECGKGQDSRVQD 283
+WFW P DQ G+G T INGG EC + + VQ
Sbjct: 224 MWFWNLNVRP---------------VLDQ------GFGATTRKINGG-ECNGRRPAAVQS 261
Query: 284 RIGFYKRYCDLLGVGYGNNLDC 305
R+ +Y +C LG+ G NL C
Sbjct: 262 RVNYYLEFCRTLGITPGANLSC 283
>AT2G43590.1 | Symbols: | chitinase, putative |
chr2:18088669-18089826 REVERSE
Length = 264
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/276 (34%), Positives = 138/276 (50%), Gaps = 46/276 (16%)
Query: 36 CPGGICCSKYGWCGSTSEYXXXXXXX---XXXXXXXXXXXXXIISRDTFNTMLKHRDDGG 92
C +CCS++G+CG+ Y I+++ FN ++ +G
Sbjct: 29 CAPNLCCSQFGYCGTDDAYCGVGCRSGPCRGSGTPTGGSVGSIVTQGFFNNIINQAGNG- 87
Query: 93 CPAKGFYTYDAFISAAKAYPSFGTTGDTSTRKREIAAFFGQTSHETTGGWATAPDGPYAW 152
C K FYT D+F++AA +P+F S +REIA F +HET
Sbjct: 88 CAGKRFYTRDSFVNAANTFPNFAN----SVTRREIATMFAHFTHETGH------------ 131
Query: 153 GYCFVREQNPSA--YC-SPSSQWPCASGKQYYGRGPIQITWNYNYGQCGRAIGADLLNNP 209
+C++ E N + YC S ++Q+PCA GK Y+GRGPIQ++WNYNYG CG+++G DLL P
Sbjct: 132 -FCYIEEINGATRNYCQSSNTQYPCAPGKGYFGRGPIQLSWNYNYGACGQSLGLDLLRQP 190
Query: 210 DAVATDAVISFKTAIWFWMTAQSPKPSCHDVITGRWSPSSADQAAGRVSGYGTVTNIING 269
+ V ++ ++F+T +WFWM + P + G+G IN
Sbjct: 191 ELVGSNPTVAFRTGLWFWMNSVRPVLN---------------------QGFGATIRAIN- 228
Query: 270 GLECGKGQDSRVQDRIGFYKRYCDLLGVGYGNNLDC 305
G+EC G V RIG+Y+ YC LGV G NL C
Sbjct: 229 GMECNGGNSGAVNARIGYYRDYCGQLGVDPGPNLSC 264
>AT2G43580.1 | Symbols: | chitinase, putative |
chr2:18085894-18087090 REVERSE
Length = 265
Score = 146 bits (369), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 86/277 (31%), Positives = 138/277 (49%), Gaps = 47/277 (16%)
Query: 36 CPGGICCSKYGWCGSTSEYXXXXXXXXXXXX----XXXXXXXXIISRDTFNTMLKHRDDG 91
C +CCS++G+CG+T++Y I+++ FN ++ +G
Sbjct: 29 CAPNLCCSQFGYCGTTADYCGSTCQSGPCRVGGPPTGAGLVGNIVTQIFFNNIINQAGNG 88
Query: 92 GCPAKGFYTYDAFISAAKAYPSFGTTGDTSTRKREIAAFFGQTSHETTGGWATAPDGPYA 151
C K FYT D+FI+A +PSF T +REIA F ++ET
Sbjct: 89 -CAGKSFYTRDSFINATNTFPSFANT----VTRREIATMFAHFTYETGH----------- 132
Query: 152 WGYCFVREQNPSA--YCSPSS-QWPCASGKQYYGRGPIQITWNYNYGQCGRAIGADLLNN 208
+C++ E N ++ C ++ Q+PCA K Y+GRGP+ ++WN+NYG CG+++G DLL
Sbjct: 133 --FCYIEEINGASRVMCDQNNRQYPCAPAKSYHGRGPLLLSWNFNYGACGQSLGLDLLRQ 190
Query: 209 PDAVATDAVISFKTAIWFWMTAQSPKPSCHDVITGRWSPSSADQAAGRVSGYGTVTNIIN 268
P+ V+++ V++F+TA+WFWM + P + G+G I+
Sbjct: 191 PELVSSNPVVAFRTALWFWMKSVRPVLN---------------------QGFGATIRAIS 229
Query: 269 GGLECGKGQDSRVQDRIGFYKRYCDLLGVGYGNNLDC 305
G +C V RIG+Y+ YC LG+ G N+ C
Sbjct: 230 -GFDCDGRNLGGVNARIGYYRDYCGQLGLDPGANITC 265
>AT1G56680.1 | Symbols: | glycoside hydrolase family 19 protein |
chr1:21254093-21255082 REVERSE
Length = 280
Score = 125 bits (314), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/285 (31%), Positives = 124/285 (43%), Gaps = 55/285 (19%)
Query: 36 CPG-GICCSKYGWCGSTSEY-----------XXXXXXXXXXXXXXXXXXXXIISRDTFNT 83
CPG CCS G+CG+ E+ I++ F+
Sbjct: 36 CPGINECCSHTGYCGTNVEHCGFWCLSGPCQLSKSSSSYRLNDGPRGKIESIVTPALFHR 95
Query: 84 MLKHRDDGGCPAKGFYTYDAFISAAKAYPSFGTTGDTSTRKREIAAFFGQTSHETTGGWA 143
+++ + C KGFYT +AFI+A K++ + T KREIAA Q S+E+
Sbjct: 96 LMR-KVGSNCTGKGFYTREAFITAVKSFEGYKGT----VAKREIAAILAQFSYESGN--- 147
Query: 144 TAPDGPYAWGYCFVREQNPSAYCSPSSQWPCASGKQYYGRGPIQ-ITWNYNYGQCGRAIG 202
+C+ E YCS S +PC SGK+YYGRG +Q I WN YG+ G+ +G
Sbjct: 148 ----------FCYKEEVTSETYCSSSKTYPCQSGKKYYGRGLLQSIKWNEFYGEAGKYLG 197
Query: 203 ADLLNNPDAVATDAVISFKTAIWFWMTAQSPKPSCHDVITGRWSPSSADQAAGRVSGYGT 262
LL +PD VA ++FK A+WFW T P G+G
Sbjct: 198 LPLLKDPDMVARSPEVAFKFAMWFWKTEVGPSLRL---------------------GFGA 236
Query: 263 VTNIINGGLECG--KGQDSRVQDRIGFYKRYCDLLGVGYGNNLDC 305
T IN G+ECG +Q+RI Y C GV G +L C
Sbjct: 237 TTMRIN-GIECGGMSWNAEAMQNRINQYLEICKWFGVNPGKDLYC 280
>AT2G43600.1 | Symbols: | glycoside hydrolase family 19 protein |
chr2:18093126-18094095 REVERSE
Length = 273
Score = 121 bits (304), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 134/285 (47%), Gaps = 56/285 (19%)
Query: 36 CPG-GICCSKYGWCGSTSEY-------------XXXXXXXXXXXXXXXXXXXXIISRDTF 81
CPG CCS++G+CG+ EY +I+ F
Sbjct: 30 CPGLKECCSRWGFCGTKDEYCGFFCFSGPCNIKGKSYGYDYNVDAGPRGKIETVITSALF 89
Query: 82 NTMLKHRDDGGCPAKGFYTYDAFISAAKAYPSFGTTGDTSTRKREIAAFFGQTSHETTGG 141
++++ + + C AKGFYTY+AFI+A K++ ++ KREIAA S+ +
Sbjct: 90 DSIM-SKVESNCSAKGFYTYEAFITAFKSFGAY----KGKVAKREIAAILAHFSYGSKS- 143
Query: 142 WATAPDGPYAWGYCFVREQNPSAYCSPSSQWPCASGKQYYGRGPIQ-ITWNYNYGQCGRA 200
+C+ E + YCS S ++PC GK YYGRG +Q ITWN YG G+
Sbjct: 144 ------------FCYKEEISNERYCSKSKKYPCEPGKNYYGRGLLQSITWNEYYGA-GKH 190
Query: 201 IGADLLNNPDAVATDAVISFKTAIWFWMTAQSPKPSCHDVITGRWSPSSADQAAGRVSGY 260
+G LL +PD V+ ++FK A+WFW ++ +P+ + G+
Sbjct: 191 LGLPLLKDPDLVSRSPEVAFKFAMWFW--NRNVRPALY-------------------LGF 229
Query: 261 GTVTNIINGGLECGKGQDSRVQDRIGFYKRYCDLLGVGYGNNLDC 305
G +T ++ G ECG + ++++ Y +C++LGV LDC
Sbjct: 230 GEITKRVD-GRECGNWRRDDTKNKVKQYIEFCEMLGVTPDQGLDC 273
>AT3G47540.1 | Symbols: | chitinase, putative |
chr3:17532029-17532982 FORWARD
Length = 214
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 105/235 (44%), Gaps = 57/235 (24%)
Query: 75 IISRDTFNTMLKHRDDGGCPAKGFYTYDAFISAAKAYPSFGTTGDTSTRKREIAAFFGQT 134
I+++ FN ++ +G C K F T D+FI AA +P+F + S +REIA+ F
Sbjct: 33 IVTQGFFNNIINQAGNG-CTRKRFNTRDSFIDAANNFPNFAS----SVTRREIASMFAHV 87
Query: 135 SHETTGGWATAPDGPYAWGYCFVRE--QNPSAYCSPS-SQWPCAS-GKQYYGRGPIQITW 190
+HET +C++ E + C + Q PC S K + GRG
Sbjct: 88 THET-------------GHFCYIEEIKKRSRGRCDENVEQRPCPSQSKGHSGRGH----- 129
Query: 191 NYNYGQCGRAIGADLLNNPDAVATDAVISFKTAIWFWMTAQSPKPSCHDVITGRWSPSSA 250
+++G DLL P+ V ++ ++F+ + FW+ + P +
Sbjct: 130 --------QSLGLDLLRQPELVGSNPTVAFRKGLSFWINSVRPVLN-------------- 167
Query: 251 DQAAGRVSGYGTVTNIINGGLECGKGQDSRVQDRIGFYKRYCDLLGVGYGNNLDC 305
G+G ING +EC G V+ RIG+Y+ YC LGV G+NL C
Sbjct: 168 -------QGFGATIRAING-MECNGGNSGAVKARIGYYRDYCRQLGVDPGHNLSC 214
>AT3G04720.1 | Symbols: HEL, PR-4, PR4 | PR4 (PATHOGENESIS-RELATED
4) | chr3:1285697-1286537 REVERSE
Length = 212
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 36/51 (70%)
Query: 4 MKMRLGIAILVSFILVGWCRGEQCGSQAGGALCPGGICCSKYGWCGSTSEY 54
MK+RL I I++ V G+QCG Q GG CPG ICCS+YG+CG+T++Y
Sbjct: 1 MKIRLSITIILLSYTVATVAGQQCGRQGGGRTCPGNICCSQYGYCGTTADY 51