Miyakogusa Predicted Gene
- Lj6g3v2275270.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1MJV0_SOYBN |
1121 |
89.5 |
94.9 |
(tr|I1MJV0) Uncharacterized protein OS=Glycine max PE=4 SV=2 |
| TAIR_pep |
AT4G24290.2 |
910 |
73.3 |
85.5 |
| Symbols: | MAC/Perforin domain-containing protein | chr4:12594856-12597815 FORWARD LENGTH=606 |
| Medicago |
Medtr2g005730.1 |
1095 |
87.9 |
94.6 |
| MACPF domain protein | HC | chr2:285882-292301 | 20130731 |
| Soybean |
Glyma12g28780.1 |
1115 |
89.1 |
94.2 |
|
| LJGI |
gnl|LJGI|AV407953 |
759 |
100.0 |
100.0 |
similar to UniRef100_Q1SKW8 Cluster: Membrane attack complex component/perforin/complement C9; n=1; Medicago truncatula|Rep: Membrane attack complex component/perforin/complement C9 - Medicago truncatula (Barrel medic), partial (21%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v2275270.1 |
length: 606 aa. |
| IPR020864 |
Membrane attack complex component/perforin (MACPF) domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF01823 |
MACPF |
6.3e-30 |
106-317 |
| HMMSmart |
SM00457 |
membrane-attack |
4.3e-20 |
124-319 |
| ProfileScan |
PS51412 |
MACPF_2 |
23.202 |
1-331 |
| no_ID |
|
| HMMPanther |
PTHR32413 |
FAMILY |
0 |
1-606 |
| HMMPanther |
PTHR32413:SF1 |
SUBFAMILY |
0 |
1-606 |
| Seg |
seg |
seg |
NA |
10-21 |
- Wolf-PSORT
Lj6g3v2275270.1 chlo 6, vacu 3, chlo_mito 3, cyto 2, E.R._vacu 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v2275270.1 |
|