Miyakogusa Predicted Gene

Lj6g3v2275070.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1MF30_SOYBN 172 79.4 88.2 (tr|I1MF30) Uncharacterized protein (Fragment) OS=Glycine max PE=4 SV=2
TAIR_pep AT1G26900.1 130 60.8 77.5 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:9319756-9321474 REVERSE LENGTH=572
Medicago Medtr2g019350.1 153 73.5 83.3 | PPR containing plant-like protein | HC | chr2:6301271-6304315 | 20130731
Soybean Glyma15g10060.1 172 79.4 88.2  
LJGI gnl|LJGI|BP038410 109 98.3 98.3 weakly similar to UniRef100_A7QEG3 Cluster: Chromosome chr1 scaffold_84, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_84, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v2275070.1 length: 102 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 2e-06 49-75
78-102
HMMTigr TIGR00756 PPR: 1.6e-05 49-77
78-102
ProfileScan PS51375 PPR 6.270 44-78
79-102
no_ID  
HMMPanther PTHR24015 FAMILY 6.2e-39 1-102
HMMPanther PTHR24015:SF109SUBFAMILY NOT 6.2e-39 1-102
ProfileScan PS51257 PROKAR_LIPOPROTEIN 6.000 1-20
Wolf-PSORT
Lj6g3v2275070.1	chlo 12, mito 1, E.R. 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v2275070.1