Miyakogusa Predicted Gene
- Lj6g3v2274630.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7LIM7_MEDTR |
467 |
82.0 |
88.3 |
(tr|G7LIM7) Pheophorbide a oxygenase OS=Medicago truncatula GN=MTR_8g085840 PE=4 SV=1 |
| TAIR_pep |
AT4G25650.2 |
364 |
64.1 |
78.8 |
| Symbols: ACD1-LIKE, PTC52, TIC55-IV | ACD1-like | chr4:13081021-13083153 REVERSE LENGTH=559 |
| Medicago |
Medtr8g085840.1 |
467 |
82.0 |
88.3 |
| chlorophyllide A oxygenase | HC | chr8:35594442-35589475 | 20130731 |
| Soybean |
Glyma08g12070.1 |
454 |
81.3 |
87.6 |
|
| LJGI |
gnl|LJGI|TC57317 |
1584 |
100.0 |
100.0 |
similar to UniRef100_A7P068 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (36%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v2274630.1 |
length: 271 aa. |
| IPR017941 |
Rieske [2Fe-2S] iron-sulphur domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0016491 |
oxidoreductase activity |
|
|
| Molecular Function |
GO:0051537 |
2 iron, 2 sulfur cluster binding |
|
|
| Biological Process |
GO:0055114 |
oxidation-reduction process |
|
|
| Gene3D |
G3DSA:2.102.10.10 |
no description |
4.7e-35 |
87-205 |
| HMMPfam |
PF00355 |
Rieske |
3.6e-17 |
87-175 |
| ProfileScan |
PS51296 |
RIESKE |
26.822 |
88-198 |
| superfamily |
SSF50022 |
ISP |
5.9e-32 |
60-205 |
| no_ID |
|
| HMMPanther |
PTHR21266 |
IRON-SULFUR |
1.8e-107 |
70-270 |
| HMMPanther |
PTHR21266:SF3 |
PHEOPHORBIDE |
1.8e-107 |
70-270 |
| superfamily |
SSF55961 |
Bet |
4.2e-13 |
193-265 |
- Wolf-PSORT
Lj6g3v2274630.1 chlo 6, nucl 4, cyto 1, mito 1, plas 1, cysk 1, cysk_plas 1, mito_plas 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v2274630.1 |
|