Miyakogusa Predicted Gene

Lj6g3v2274490.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL G7IPF9_MEDTR 1441 83.4 90.3 (tr|G7IPF9) Potassium channel OS=Medicago truncatula GN=MTR_2g006870 PE=4 SV=1
TAIR_pep AT4G22200.1 1086 65.6 77.1 | Symbols: AKT2/3, AKT3, AKT2, KT2/3 | potassium transport 2/3 | chr4:11746666-11750091 REVERSE LENGTH=802
Medicago Medtr2g006870.1 1441 83.4 90.3 | potassium outward rectifying channel protein | HC | chr2:661516-654544 | 20130731
Soybean Glyma12g29190.1 1163 83.0 90.2  
LJGI gnl|LJGI|DC594567 224 97.8 97.8 homologue to UniRef100_O24538 Cluster: Potassium channel; n=1; Vicia faba|Rep: Potassium channel - Vicia faba (Broad bean), partial (7%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v2274490.1 length: 831 aa.
IPR000595 Cyclic nucleotide-binding domain
method AccNumber shortName E-value location
HMMPfam PF00027 cNMP_binding 3.8e-12 419-501
HMMSmart SM00100 Cyclic 4.2e-24 398-515
ProfileScan PS50042 CNMP_BINDING_3 20.846 398-517
IPR002110 Ankyrin repeat
Molecular Function GO:0005515 protein binding    
FPrintScan PR01415 ANKYRIN 2e-07 574-589
686-700
HMMSmart SM00248 ankyrin 0.0015 540-569
573-602
606-637
640-666
670-699
ProfileScan PS50088 ANK_REPEAT 11.301 573-605
670-702
IPR003938 Potassium channel, voltage-dependent, EAG/ELK/ERG
Molecular Function GO:0005249 voltage-gated potassium channel activity    
Biological Process GO:0006813 potassium ion transport    
Cellular Component GO:0016020 membrane    
FPrintScan PR01463 EAGCHANLFMLY 1.1e-10 115-125
126-135
268-285
294-305
312-321
IPR005821 Ion transport domain
Molecular Function GO:0005216 ion channel activity    
Biological Process GO:0006811 ion transport    
Cellular Component GO:0016020 membrane    
Biological Process GO:0055085 transmembrane transport    
HMMPfam PF00520 Ion_trans 2.5e-21 114-316
IPR014710 RmlC-like jelly roll fold
Gene3D G3DSA:2.60.120.10 no description 4.7e-20 382-511
IPR018490 Cyclic nucleotide-binding-like
superfamily SSF51206 cAMP-binding 5.1e-41 324-520
IPR020683 Ankyrin repeat-containing domain
Gene3D G3DSA:1.25.40.20 no description 5.1e-35 512-720
HMMPfam PF12796 Ank_2 5.8e-14 547-628
ProfileScan PS50297 ANK_REP_REGION 30.953 540-702
superfamily SSF48403 Ankyrin 8.2e-34 538-724
IPR021789 Potassium channel, plant-type
HMMPfam PF11834 DUF3354 1.1e-24 757-830
ProfileScan PS51490 KHA 26.609 758-831
no_ID  
Gene3D G3DSA:1.10.287.70 no description 1.8e-44 79-320
HMMPanther PTHR10217 VOLTAGE 2e-137 64-517
HMMPanther PTHR10217:SF7 CYCLIC 2e-137 64-517
HMMPfam PF13637 Ank_4 2.4e-05 641-691
Seg seg seg NA 481-493
superfamily SSF81324 Voltage-gated 3.9e-44 72-325
Wolf-PSORT
Lj6g3v2274490.1	plas 5.5, mito_plas 4, nucl 3, cyto 3, cyto_nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v2274490.1