Miyakogusa Predicted Gene
- Lj6g3v2271030.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7M9N2_SOYBN |
1269 |
77.7 |
86.1 |
(tr|K7M9N2) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G71240.2 |
893 |
58.6 |
74.2 |
| Symbols: | Plant protein of unknown function (DUF639) | chr1:26855489-26859599 FORWARD LENGTH=823 |
| Medicago |
Medtr2g007330.1 |
1209 |
75.7 |
84.5 |
| DUF639 family protein | HC | chr2:947997-953239 | 20130731 |
| Soybean |
Glyma08g19800.1 |
1261 |
77.5 |
86.0 |
|
| LJGI |
gnl|LJGI|TC68950 |
1187 |
98.7 |
98.7 |
similar to UniRef100_A7PYT7 Cluster: Chromosome chr12 scaffold_38, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_38, whole genome shotgun sequence - Vitis vinifera (Grape), partial (10%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v2271030.1 |
length: 790 aa. |
| IPR006927 |
Protein of unknown function DUF639 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF04842 |
DUF639 |
2.1e-216 |
106-787 |
| no_ID |
|
| HMMPanther |
PTHR31860 |
FAMILY |
1.5e-248 |
48-790 |
| Seg |
seg |
seg |
NA |
518-536 |
- Wolf-PSORT
Lj6g3v2271030.1 chlo 6, vacu 4, nucl 1, plas 1, E.R. 1, pero 1, nucl_plas 1, E.R._plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v2271030.1 |
|