Miyakogusa Predicted Gene

Lj6g3v2270990.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KUK6_SOYBN 470 70.8 78.1 (tr|I1KUK6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G25290.2 291 52.2 66.1 | Symbols: RBL10 | RHOMBOID-like protein 10 | chr1:8867157-8868945 FORWARD LENGTH=336
Medicago Medtr2g081010.1 442 70.1 77.3 | S54 family peptidase | HC | chr2:33941444-33945526 | 20130731
Soybean Glyma08g19760.1 470 70.8 78.1  
LJGI gnl|LJGI|TC64578 2016 100.0 100.0 similar to UniRef100_A7PYS3 Cluster: Chromosome chr12 scaffold_38, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_38, whole genome shotgun sequence - Vitis vinifera (Grape), partial (63%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v2270990.1 length: 338 aa.
IPR002610 Peptidase S54, rhomboid
method AccNumber shortName E-value location
Molecular Function GO:0004252 serine-type endopeptidase activity    
Biological Process GO:0006508 proteolysis    
Cellular Component GO:0016021 integral to membrane    
HMMPanther PTHR22936 RHOMBOID-RELATED 5.2e-42 126-306
IPR022764 Peptidase S54, rhomboid domain
Molecular Function GO:0004252 serine-type endopeptidase activity    
Cellular Component GO:0016021 integral to membrane    
Gene3D G3DSA:1.20.1540.10 no description 4.8e-43 129-302
HMMPfam PF01694 Rhomboid 1.7e-35 164-303
no_ID  
HMMPanther PTHR22936:SF0 SUBFAMILY 5.2e-42 126-306
Seg seg seg NA 32-49
96-111
286-294
superfamily SSF144091 Rhomboid-like 3.7e-43 123-310
Wolf-PSORT
Lj6g3v2270990.1	E.R. 4, chlo 3, cyto 3, nucl 2, chlo_mito 2, E.R._plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v2270990.1