Miyakogusa Predicted Gene
- Lj6g3v2257830.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
K7L7H4_SOYBN |
441 |
47.1 |
58.6 |
(tr|K7L7H4) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G23570.1 |
300 |
46.5 |
64.7 |
| Symbols: SGS3, ATSGS3 | XS domain-containing protein / XS zinc finger domain-containing protein-related | chr5:7943621-7945874 FORWARD LENGTH=625 |
| Medicago |
Medtr2g007690.2 |
390 |
58.1 |
70.2 |
| XS domain protein/XS zinc finger protein | HC | chr2:1079146-1083122 | 20130731 |
| Soybean |
Glyma08g19690.1 |
441 |
47.1 |
58.6 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v2257830.1 |
length: 475 aa. |
| IPR005380 |
XS domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF03468 |
XS |
2.2e-10 |
310-400 |
| no_ID |
|
| HMMPanther |
PTHR21596 |
RIBONUCLEASE |
2.3e-98 |
142-475 |
| HMMPanther |
PTHR21596:SF1 |
TRANSCRIPTION |
2.3e-98 |
142-475 |
| Seg |
seg |
seg |
NA |
122-145 |
- Wolf-PSORT
Lj6g3v2257830.1 nucl 5, cyto 3, mito 2, vacu 2, E.R. 2, E.R._vacu 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v2257830.1 |
|