Miyakogusa Predicted Gene
- Lj6g3v2245640.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1M628_SOYBN |
244 |
80.4 |
87.8 |
(tr|I1M628) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT4G35335.1 |
194 |
70.5 |
78.5 |
| Symbols: | Nucleotide-sugar transporter family protein | chr4:16807286-16810015 FORWARD LENGTH=352 |
| Medicago |
Medtr5g099280.1 |
201 |
66.9 |
78.1 |
| CMP-sialic acid transporter, putative | HC | chr5:43526472-43532288 | 20130731 |
| Soybean |
Glyma14g00290.1 |
244 |
80.4 |
87.8 |
|
| LJGI |
gnl|LJGI|TC69104 |
829 |
99.8 |
99.8 |
similar to UniRef100_Q6DBP9 Cluster: At4g35335; n=2; Arabidopsis thaliana|Rep: At4g35335 - Arabidopsis thaliana (Mouse-ear cress), partial (89%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v2245640.1 |
length: 159 aa. |
| IPR007271 |
Nucleotide-sugar transporter |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0000139 |
Golgi membrane |
|
|
| Molecular Function |
GO:0005351 |
sugar:hydrogen symporter activity |
|
|
| Biological Process |
GO:0008643 |
carbohydrate transport |
|
|
| Cellular Component |
GO:0016021 |
integral to membrane |
|
|
| HMMPanther |
PTHR10231 |
NUCLEOTIDE-SUGAR |
5.7e-36 |
1-142 |
| no_ID |
|
| HMMPanther |
PTHR10231:SF6 |
NUCLEOTIDE-SUGAR |
5.7e-36 |
1-142 |
| Seg |
seg |
seg |
NA |
142-159 |
- Wolf-PSORT
Lj6g3v2245640.1 cyto 9.5, cyto_nucl 5.83333, cysk_nucl 1.33333, mito 1, extr 1, golg 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v2245640.1 |
|