Miyakogusa Predicted Gene

Lj6g3v2218700.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL G7INS5_MEDTR 714 74.8 81.7 (tr|G7INS5) F-box/kelch-repeat protein OS=Medicago truncatula GN=MTR_2g008440 PE=4 SV=1
TAIR_pep AT1G22040.1 516 53.3 70.1 | Symbols: | Galactose oxidase/kelch repeat superfamily protein | chr1:7768370-7769797 FORWARD LENGTH=475
Medicago Medtr2g008440.1 714 74.8 81.7 | galactose oxidase/kelch repeat protein | HC | chr2:1477784-1476354 | 20130731
Soybean Glyma08g07920.1 702 72.4 80.2  
LJGI gnl|LJGI|FS357537 319 86.2 86.2 weakly similar to UniRef100_A7Q6X7 Cluster: Chromosome chr12 scaffold_57, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_57, whole genome shotgun sequence - Vitis vinifera (Grape), partial (37%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v2218700.1 length: 463 aa.
IPR001810 F-box domain, cyclin-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 0.0006 44-81
HMMSmart SM00256 A 0.00039 47-87
ProfileScan PS50181 FBOX 9.153 41-87
superfamily SSF81383 F-box 3.1e-06 44-84
IPR006652 Kelch repeat type 1
Molecular Function GO:0005515 protein binding    
HMMPfam PF01344 Kelch_1 1e-10 177-219
222-273
HMMSmart SM00612 no description 0.00028 186-232
233-283
IPR015916 Galactose oxidase, beta-propeller
Gene3D G3DSA:2.130.10.80 no description 8e-39 174-387
no_ID  
HMMPanther PTHR24414 FAMILY 2.8e-170 42-456
HMMPanther PTHR24414:SF13 SUBFAMILY 2.8e-170 42-456
Seg seg seg NA 236-249
superfamily SSF117281 Kelch 6.5e-40 94-461
Wolf-PSORT
Lj6g3v2218700.1	nucl 6, chlo 4, mito 1, plas 1, extr 1, cysk 1, cysk_plas 1, mito_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v2218700.1