Miyakogusa Predicted Gene

Lj6g3v2218350.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7M9Q9_SOYBN 850 61.3 71.3 (tr|K7M9Q9) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G78160.1 447 64.8 82.1 | Symbols: APUM7, PUM7 | pumilio 7 | chr1:29407900-29410184 FORWARD LENGTH=650
Medicago Medtr2g008770.1 770 56.2 66.0 | pumilio-family RNA-binding repeatprotein | LC | chr2:1611979-1606856 | 20130731
Soybean Glyma08g19140.1 714 58.8 67.0  
LJGI gnl|LJGI|TC72664 353 100.0 100.0 similar to UniRef100_A7QII7 Cluster: Chromosome chr12 scaffold_103, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_103, whole genome shotgun sequence - Vitis vinifera (Grape), partial (9%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v2218350.1 length: 767 aa.
IPR001313 Pumilio RNA-binding repeat
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
HMMPfam PF00806 PUF 1.2e-05 456-480
484-518
528-554
562-594
600-624
633-663
HMMSmart SM00025 Pumilio-like 0.041 448-483
484-519
523-558
560-595
596-631
632-667
668-703
706-741
ProfileScan PS50302 PUM 9.201 448-483
484-520
523-559
560-595
596-631
632-667
668-703
704-741
ProfileScan PS50303 PUM_HD 84.932 425-767
IPR011989 Armadillo-like helical
Gene3D G3DSA:1.25.10.10 no description 1.4e-111 444-761
IPR016024 Armadillo-type fold
Molecular Function GO:0005488 binding    
superfamily SSF48371 ARM 3.3e-101 428-761
no_ID  
HMMPanther PTHR12537 RNA 3.8e-174 136-761
HMMPanther PTHR12537:SF13 PUMILIO-RELATED 3.8e-174 136-761
Seg seg seg NA 55-78
136-147
Wolf-PSORT
Lj6g3v2218350.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v2218350.1