Miyakogusa Predicted Gene

Lj6g3v2218220.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7M9R6_SOYBN 1541 72.0 77.5 (tr|K7M9R6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G64220.2 956 50.4 63.5 | Symbols: | Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains | chr5:25686434-25691903 FORWARD LENGTH=1050
Medicago Medtr2g008840.1 1530 73.4 79.1 | calmodulin-binding transcription activator 1 | HC | chr2:1646546-1659991 | 20130731
Soybean Glyma15g05900.1 1333 65.8 71.3  
LJGI gnl|LJGI|BP055570 1082 99.3 99.3 weakly similar to UniRef100_Q6NPP4 Cluster: Calmodulin-binding transcription activator 2; n=2; Arabidopsis thaliana|Rep: Calmodulin-binding transcription activator 2 - Arabidopsis thaliana (Mouse-ear cress), partial (9%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v2218220.1 length: 1041 aa.
IPR000048 IQ motif, EF-hand binding site
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00612 IQ 0.00016 866-884
889-908
HMMSmart SM00015 Short 0.0071 863-885
886-908
ProfileScan PS50096 IQ 9.413 864-893
887-911
IPR002110 Ankyrin repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00248 ankyrin 1.9e+03 655-684
688-717
727-756
ProfileScan PS50088 ANK_REPEAT 10.873 655-687
688-720
IPR005559 CG-1 DNA-binding domain
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
HMMPfam PF03859 CG-1 2.8e-53 17-134
HMMSmart SM01076 no description 4.4e-79 16-134
ProfileScan PS51437 CG_1 79.837 13-139
IPR013783 Immunoglobulin-like fold
Gene3D G3DSA:2.60.40.10 no description 7.5e-05 455-543
IPR014756 Immunoglobulin E-set
superfamily SSF81296 E 3.9e-19 456-543
IPR020683 Ankyrin repeat-containing domain
Gene3D G3DSA:1.25.40.20 no description 3.1e-20 624-750
HMMPfam PF12796 Ank_2 2e-10 647-714
ProfileScan PS50297 ANK_REP_REGION 20.765 638-759
superfamily SSF48403 Ankyrin 1e-20 646-749
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 3.4e-09 867-918
no_ID  
HMMPanther PTHR23335 CALMODULIN-BINDING 5.4e-237 4-1038
Seg seg seg NA 157-171
563-574
602-615
747-760
840-860
1022-1033
Wolf-PSORT
Lj6g3v2218220.1	nucl 10, cyto 2, vacu 1, cysk 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v2218220.1