Miyakogusa Predicted Gene

Lj6g3v2218190.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KUC8_SOYBN 939 76.4 83.2 (tr|I1KUC8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G09420.1 719 57.2 73.9 | Symbols: ATTOC64-V, MTOM64, TOC64-V, OM64, AtmtOM64 | translocon at the outer membrane of chloroplasts 64-V | chr5:2928316-2931750 FORWARD LENGTH=603
Medicago Medtr4g094205.1 817 65.6 77.6 | translocon at the outer membrane ofs-like protein | HC | chr4:37420752-37411766 | 20130731
Soybean Glyma08g19070.1 939 76.4 83.2  
LJGI gnl|LJGI|TC78149 313 82.3 82.3 similar to UniRef100_A7QIF4 Cluster: Chromosome chr12 scaffold_103, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_103, whole genome shotgun sequence - Vitis vinifera (Grape), partial (34%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v2218190.2 length: 608 aa.
IPR000120 Amidase
method AccNumber shortName E-value location
Molecular Function GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor    
HMMPanther PTHR11895 AMIDASE 6.9e-190 66-481
HMMPfam PF01425 Amidase 2.7e-60 71-458
IPR001440 Tetratricopeptide TPR-1
Molecular Function GO:0005515 protein binding    
HMMPfam PF00515 TPR_1 3e-06 560-593
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 2.2e-32 490-596
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 22.802 492-593
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 5.9e-06 492-525
526-559
560-593
ProfileScan PS50005 TPR 11.800 492-525
526-559
560-593
IPR023631 Amidase signature domain
Gene3D G3DSA:3.90.1300.10 no description 1.2e-79 70-463
superfamily SSF75304 Amidase 8.2e-73 21-469
no_ID  
HMMPanther PTHR11895:SF6 AMIDASE 6.9e-190 66-481
HMMPfam PF13414 TPR_11 5.9e-15 491-553
Seg seg seg NA 33-46
58-69
158-171
525-536
superfamily SSF48452 TPR-like 2.7e-28 483-596
Wolf-PSORT
Lj6g3v2218190.2	chlo 4, nucl 2.5, cyto 2, E.R. 2, chlo_mito 2, cysk_nucl 2, cyto_E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v2218190.2