database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
---|---|---|---|---|---|
TrEMBL | M5W849_PRUPE | 2026 | 85.0 | 88.6 | (tr|M5W849) Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa000339mg PE=4 SV=1 |
TAIR_pep | AT5G64270.1 | 1932 | 81.2 | 85.9 | | Symbols: | splicing factor, putative | chr5:25706909-25710718 FORWARD LENGTH=1269 |
Medicago | Medtr2g009110.2 | 2014 | 86.2 | 88.5 | | splicing factor 3B subunit 1 | HC | chr2:1780752-1787840 | 20130731 |
Soybean | Glyma13g30200.1 | 1352 | 95.3 | 96.1 | |
LJGI | gnl|LJGI|CN825676 | 1283 | 100.0 | 100.0 | homologue to UniRef100_A7PTH6 Cluster: Chromosome chr8 scaffold_29, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_29, whole genome shotgun sequence - Vitis vinifera (Grape), partial (41%) |
Lj6g3v2204780.1 | length: 1187 aa. | |||
IPR011989 | Armadillo-like helical | |||
---|---|---|---|---|
method | AccNumber | shortName | E-value | location |
Gene3D | G3DSA:1.25.10.10 | no description | 1e-133 | 739-1078 |
IPR015016 | Splicing factor 3B subunit 1 | |||
HMMPfam | PF08920 | SF3b1 | 3.9e-39 | 202-335 |
IPR016024 | Armadillo-type fold | |||
Molecular Function | GO:0005488 | binding | ||
superfamily | SSF48371 | ARM | 9e-101 | 382-1175 |
IPR021133 | HEAT, type 2 | |||
ProfileScan | PS50077 | HEAT_REPEAT | 8.831 | 568-606 |
no_ID | ||||
Coil | coil | coiled-coil | NA | 63-88 |
HMMPanther | PTHR12097 | SPLICING | 0 | 6-1187 |
Seg | seg | seg | NA | 63-76 80-107 174-188 222-241 359-373 588-599 |
Lj6g3v2204780.1 plas 9, cyto 3, chlo 1, mito 1, chlo_mito 1
entry_id | prediction | score | sppta | spptna | fp | profile |
---|---|---|---|---|---|---|
Lj6g3v2204780.1 |