Miyakogusa Predicted Gene

Lj6g3v2193640.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3RZT1_LOTJA 681 95.7 95.7 (tr|I3RZT1) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G09450.1 449 54.8 73.9 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr5:2941864-2943324 FORWARD LENGTH=409
Medicago Medtr1g022400.1 620 74.9 83.9 | PPR containing plant protein | HC | chr1:7120844-7118221 | 20130731
Soybean Glyma08g18840.1 645 78.3 84.9  
LJGI gnl|LJGI|TC64859 2379 100.0 100.0 similar to UniRef100_A7QVW6 Cluster: Chromosome undetermined scaffold_194, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome undetermined scaffold_194, whole genome shotgun sequence - Vitis vinifera (Grape), partial (77%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v2193640.1 length: 399 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.78 153-181
331-356
HMMPfam PF13041 PPR_2 1.7e-09 186-232
HMMTigr TIGR00756 PPR: 0.00014 153-185
188-221
ProfileScan PS51375 PPR 5.656 150-184
185-219
220-250
327-361
362-396
no_ID  
HMMPanther PTHR24015 FAMILY 2e-172 30-395
HMMPanther PTHR24015:SF155PENTATRICOPEPTIDE (PPR) 2e-172 30-395
Seg seg seg NA 48-61
Wolf-PSORT
Lj6g3v2193640.1	chlo 10, mito 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v2193640.1