Miyakogusa Predicted Gene

Lj6g3v2192090.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1ME31_SOYBN 595 58.1 65.2 (tr|I1ME31) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G65630.1 201 39.0 52.7 | Symbols: GTE7 | global transcription factor group E7 | chr5:26226311-26228257 REVERSE LENGTH=590
Medicago Medtr4g092900.4 544 57.5 65.4 | global transcription factor group protein | HC | chr4:36871798-36874499 | 20130731
Soybean Glyma15g06570.1 595 58.1 65.2  
LJGI gnl|LJGI|TC75935 1740 100.0 100.0 similar to UniRef100_A1XX44 Cluster: Chloroplast bromodomain-containing protein; n=1; Pachysandra terminalis|Rep: Chloroplast bromodomain-containing protein - Pachysandra terminalis, partial (36%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v2192090.1 length: 546 aa.
IPR001487 Bromodomain
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
FPrintScan PR00503 BROMODOMAIN 3.4e-18 165-178
181-197
197-215
215-234
Gene3D G3DSA:1.20.920.10 no description 2.9e-35 146-258
HMMPfam PF00439 Bromodomain 4.9e-23 154-238
HMMSmart SM00297 bromo 1.5e-34 143-253
ProfileScan PS50014 BROMODOMAIN_2 18.709 162-234
superfamily SSF47370 Bromodomain 4.6e-40 124-264
IPR027353 NET domain
ProfileScan PS51525 NET 20.861 352-433
no_ID  
Coil coil coiled-coil NA 87-111
HMMPanther PTHR22880 FALZ-RELATED 2.2e-112 30-546
HMMPanther PTHR22880:SF31 BROMODOMAIN-CONTAINING 2.2e-112 30-546
Seg seg seg NA 62-74
278-327
341-355
459-477
510-539
Wolf-PSORT
Lj6g3v2192090.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v2192090.1