Miyakogusa Predicted Gene

Lj6g3v2171770.2

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr6

Full length sequence(26885540 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3T126_LOTJA 423 82.6 82.6 (tr|I3T126) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT4G33690.1 107 55.1 69.4 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: pollen tube; Has 543 Blast hits to 512 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 281; Fungi - 54; Plants - 72; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). | chr4:16175198-16176137 FORWARD LENGTH=246

Medicago Medtr2g010510.2 218 55.6 61.1 | plant/T16L1-180 protein, putative | HC | chr2:2415661-2420889 | 20130731

Soybean Glyma13g32590.1 286 65.8 75.4

LJGI gnl|LJGI|TC62017 1273 100.0 100.0 similar to UniRef100_A7QGZ7 Cluster: Chromosome chr3 scaffold_95, whole genome shotgun sequence; n=2; Vitis vinifera|Rep: Chromosome chr3 scaffold_95, whole genome shotgun sequence - Vitis vinifera (Grape), partial (55%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj6g3v2171770.2 length: 294 aa.

no_ID

method AccNumber shortName E-value location

Coil coil coiled-coil NA 3-24

Seg seg seg NA 8-22
235-294

Wolf-PSORT

Lj6g3v2171770.2 nucl 13

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj6g3v2171770.2

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3T126_LOTJA	423	82.6	82.6	(tr\|I3T126) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT4G33690.1	107	55.1	69.4	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: pollen tube; Has 543 Blast hits to 512 proteins in 106 species: Archae - 0; Bacteria - 0; Metazoa - 281; Fungi - 54; Plants - 72; Viruses - 0; Other Eukaryotes - 136 (source: NCBI BLink). \| chr4:16175198-16176137 FORWARD LENGTH=246
Medicago	Medtr2g010510.2	218	55.6	61.1	\| plant/T16L1-180 protein, putative \| HC \| chr2:2415661-2420889 \| 20130731
Soybean	Glyma13g32590.1	286	65.8	75.4
LJGI	gnl\|LJGI\|TC62017	1273	100.0	100.0	similar to UniRef100_A7QGZ7 Cluster: Chromosome chr3 scaffold_95, whole genome shotgun sequence; n=2; Vitis vinifera\|Rep: Chromosome chr3 scaffold_95, whole genome shotgun sequence - Vitis vinifera (Grape), partial (55%)

no_ID
Lj6g3v2171770.2				length: 294 aa.
method	AccNumber	shortName	E-value	location
Coil	coil	coiled-coil	NA	3-24
Seg	seg	seg	NA	8-22 235-294