Miyakogusa Predicted Gene
- Lj6g3v2130160.2
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
database |
Accession |
Score |
Iden (%) |
Posi (%) |
Definition |
TrEMBL |
K7M1R6_SOYBN |
556 |
64.2 |
76.4 |
(tr|K7M1R6) Serine/threonine-protein kinase OS=Glycine max PE=3 SV=1 |
TAIR_pep |
AT4G21390.1 |
358 |
44.1 |
63.0 |
| Symbols: B120 | S-locus lectin protein kinase family protein | chr4:11394458-11397474 REVERSE LENGTH=849 |
Medicago |
Medtr2g011210.1 |
546 |
63.2 |
76.5 |
| G-type lectin S-receptor-like Serine/Threonine-kinase | HC | chr2:2701158-2697582 | 20130731 |
Soybean |
Glyma15g07090.1 |
543 |
64.4 |
76.1 |
|
LJGI |
gnl|LJGI|BW617421 |
864 |
100.0 |
100.0 |
similar to UniRef100_Q2HTU4 Cluster: Protein kinase; S-locus glycoprotein; Curculin-like (Mannose-binding) lectin; Apple-like; n=1; Medicago truncatula|Rep: Protein kinase; S-locus glycoprotein; Curculin-like (Mannose-binding) lectin; Apple-like - Medicago truncatula (Barrel medic), partial (8%) |
- A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v2130160.2 |
length: 456 aa. |
IPR000858 |
S-locus glycoprotein |
method |
AccNumber |
shortName |
E-value |
location |
Biological Process |
GO:0048544 |
recognition of pollen |
|
|
HMMPfam |
PF00954 |
S_locus_glycop |
1.3e-21 |
223-332 |
IPR001480 |
Bulb-type lectin domain |
Gene3D |
G3DSA:2.90.10.10 |
no description |
1.5e-22 |
36-167 |
HMMPfam |
PF01453 |
B_lectin |
8.5e-27 |
85-194 |
HMMSmart |
SM00108 |
Bulb-type |
2.9e-29 |
42-161 |
ProfileScan |
PS50927 |
BULB_LECTIN |
16.213 |
34-160 |
superfamily |
SSF51110 |
alpha-D-mannose-specific |
2.2e-27 |
73-231 |
IPR003609 |
Apple-like |
HMMSmart |
SM00473 |
divergent |
0.00033 |
361-431 |
ProfileScan |
PS50948 |
PAN |
7.671 |
360-432 |
IPR013227 |
PAN-2 domain |
HMMPfam |
PF08276 |
PAN_2 |
1.3e-14 |
362-417 |
no_ID |
|
HMMPanther |
PTHR11795 |
UNCHARACTERIZED |
9.5e-34 |
51-436 |
HMMPanther |
PTHR11795:SF72 |
OS07G0550500 |
9.5e-34 |
51-436 |
Seg |
seg |
seg |
NA |
12-27 |
- Wolf-PSORT
Lj6g3v2130160.2 extr 5, vacu 5, chlo 2, nucl 1, golg 1, chlo_mito 1
- PTS1 (Peroxisome targeting signal type 1)
entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
Lj6g3v2130160.2 |
|