Miyakogusa Predicted Gene

Lj6g3v2080300.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1M2C3_SOYBN 1487 85.2 90.9 (tr|I1M2C3) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT4G32010.1 488 56.8 70.3 | Symbols: HSL1, HSI2-L1, VAL2 | HSI2-like 1 | chr4:15481231-15484897 FORWARD LENGTH=780
Medicago Medtr2g011940.1 1443 82.2 88.3 | AP2/B3 transcription factor family protein | HC | chr2:3002761-3012325 | 20130731
Soybean Glyma13g31970.1 1347 80.1 85.9  
LJGI gnl|LJGI|CN825325 1070 100.0 100.0 similar to UniRef100_A7NY07 Cluster: Chromosome chr6 scaffold_3, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr6 scaffold_3, whole genome shotgun sequence - Vitis vinifera (Grape), partial (18%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v2080300.2 length: 883 aa.
IPR003340 B3 DNA binding domain
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02362 B3 4.1e-18 337-437
HMMSmart SM01019 B3 4.4e-21 337-438
ProfileScan PS50863 B3 11.138 337-438
IPR011124 Zinc finger, CW-type
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF07496 zf-CW 1.6e-12 568-611
ProfileScan PS51050 ZF_CW 14.286 563-613
IPR015300 DNA-binding pseudobarrel domain
Gene3D G3DSA:2.40.330.10 no description 5.5e-30 329-444
superfamily SSF101936 DNA-binding 1.1e-19 331-445
no_ID  
Coil coil coiled-coil NA 713-739
HMMPanther PTHR23336 ZINC 1.7e-72 293-731
HMMPanther PTHR23336:SF2 SUBFAMILY 1.7e-72 293-731
Seg seg seg NA 4-10
734-744
835-851
Wolf-PSORT
Lj6g3v2080300.2	nucl 12, cyto 1, cysk 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v2080300.2