Miyakogusa Predicted Gene

Lj6g3v2055770.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr6

Full length sequence(26885540 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3S880_LOTJA 179 65.5 73.0 (tr|I3S880) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1

TAIR_pep AT1G11120.2 132 53.0 64.2 | Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28170.1); Has 94 Blast hits to 94 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:3715229-3717320 FORWARD LENGTH=161

Medicago Medtr4g090440.1 160 59.0 68.6 | transmembrane protein, putative | HC | chr4:35836726-35840521 | 20130731

Soybean Glyma13g25320.1 178 61.9 70.0

LJGI gnl|LJGI|TC77868 900 99.4 99.4 similar to UniRef100_A7PXE1 Cluster: Chromosome chr12 scaffold_36, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_36, whole genome shotgun sequence - Vitis vinifera (Grape), partial (55%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj6g3v2055770.1 length: 153 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 63-75

Wolf-PSORT

Lj6g3v2055770.1 chlo 7, nucl 2, plas 2, nucl_plas 2

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj6g3v2055770.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3S880_LOTJA	179	65.5	73.0	(tr\|I3S880) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep	AT1G11120.2	132	53.0	64.2	\| Symbols: \| unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G28170.1); Has 94 Blast hits to 94 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). \| chr1:3715229-3717320 FORWARD LENGTH=161
Medicago	Medtr4g090440.1	160	59.0	68.6	\| transmembrane protein, putative \| HC \| chr4:35836726-35840521 \| 20130731
Soybean	Glyma13g25320.1	178	61.9	70.0
LJGI	gnl\|LJGI\|TC77868	900	99.4	99.4	similar to UniRef100_A7PXE1 Cluster: Chromosome chr12 scaffold_36, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr12 scaffold_36, whole genome shotgun sequence - Vitis vinifera (Grape), partial (55%)

no_ID
Lj6g3v2055770.1				length: 153 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	63-75