Miyakogusa Predicted Gene

Lj6g3v2055740.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T4M7_LOTJA 431 94.2 94.7 (tr|I3T4M7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT1G61150.6 378 81.3 87.6 | Symbols: | LisH and RanBPM domains containing protein | chr1:22542979-22544355 FORWARD LENGTH=226
Medicago Medtr2g012810.1 408 90.1 92.8 | LisH and RanBPM domain protein | HC | chr2:3306938-3301342 | 20130731
Soybean Glyma13g31720.3 414 90.3 92.5  
LJGI gnl|LJGI|TC63814 1348 99.9 99.9 similar to UniRef100_A9TZ15 Cluster: Predicted protein; n=1; Physcomitrella patens subsp. patens|Rep: Predicted protein - Physcomitrella patens subsp. patens, partial (96%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v2055740.1 length: 226 aa.
IPR006594 LisH dimerisation motif
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMSmart SM00667 Lissencephaly 1.2e-08 23-55
ProfileScan PS50896 LISH 11.777 23-55
IPR006595 CTLH, C-terminal LisH motif
HMMSmart SM00668 C-terminal 5.1e-18 61-118
ProfileScan PS50897 CTLH 15.045 61-118
IPR013144 CRA domain
HMMSmart SM00757 CT11-RanBPM 1.4e-31 114-210
IPR013720 LisH dimerisation motif, subgroup
HMMPfam PF08513 LisH 9.1e-10 25-51
IPR024964 CTLH/CRA C-terminal to LisH motif domain
HMMPfam PF10607 CLTH 6.7e-40 62-204
no_ID  
Coil coil coiled-coil NA 10-31
HMMPanther PTHR12864 RAN 2.2e-113 8-225
Seg seg seg NA 117-128
Wolf-PSORT
Lj6g3v2055740.1	cyto 10, nucl_plas 2.5, plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v2055740.1