Miyakogusa Predicted Gene
- Lj6g3v2043260.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7KWR1_MEDTR |
283 |
52.0 |
67.4 |
(tr|G7KWR1) S-locus F-Box protein c OS=Medicago truncatula GN=MTR_7g023950 PE=4 SV=1 |
| TAIR_pep |
AT3G52320.1 |
50.8 |
24.4 |
43.6 |
| Symbols: | F-box and associated interaction domains-containing protein | chr3:19403020-19404192 REVERSE LENGTH=390 |
| Medicago |
Medtr7g023950.1 |
283 |
52.0 |
67.4 |
| F-box protein interaction domain protein | HC | chr7:7840105-7840968 | 20130731 |
| Soybean |
--No_Hits--
|
|
|
|
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v2043260.1 |
length: 336 aa. |
| IPR017451 |
F-box associated interaction domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMTigr |
TIGR01640 |
F_box_assoc_1: |
5.5e-19 |
76-278 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
19-30 |
- Wolf-PSORT
Lj6g3v2043260.1 chlo 5, mito 4.5, nucl 3, cyto_mito 3
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v2043260.1 |
|