Miyakogusa Predicted Gene

Lj6g3v2043200.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T0X1_LOTJA 436 84.9 84.9 (tr|I3T0X1) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT3G47160.1 295 56.0 72.2 | Symbols: | RING/U-box superfamily protein | chr3:17360238-17361879 REVERSE LENGTH=245
Medicago Medtr2g013080.1 390 78.6 81.5 | RING zinc finger protein | HC | chr2:3460192-3454987 | 20130731
Soybean Glyma15g07890.2 404 78.6 81.0  
LJGI gnl|LJGI|TC57224 1405 99.0 99.0 homologue to UniRef100_A2Q4Q8 Cluster: Zinc finger, RING-type; n=1; Medicago truncatula|Rep: Zinc finger, RING-type - Medicago truncatula (Barrel medic), partial (98%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v2043200.1 length: 252 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMSmart SM00184 Ring 4e-06 156-193
ProfileScan PS50089 ZF_RING_2 12.076 156-194
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 1.1e-12 140-200
IPR017907 Zinc finger, RING-type, conserved site
PatternScan PS00518 ZF_RING_1 NA 171-180
no_ID  
HMMPanther PTHR15067 FAMILY 7.6e-120 14-252
HMMPanther PTHR15067:SF7 ZINC 7.6e-120 14-252
HMMPfam PF13920 zf-C3HC4_3 7.1e-10 153-200
Seg seg seg NA 5-10
69-80
132-151
superfamily SSF57850 RING/U-box 3.2e-13 151-209
Wolf-PSORT
Lj6g3v2043200.1	nucl 8, mito 3, chlo 1, cyto 1, plas 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v2043200.1