Miyakogusa Predicted Gene

Lj6g3v2017550.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MA64_SOYBN 852 62.3 73.9 (tr|K7MA64) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G32700.2 341 49.1 69.5 | Symbols: LUH | LEUNIG_homolog | chr2:13867235-13871844 FORWARD LENGTH=787
Medicago Medtr2g014020.1 504 63.6 77.0 | WD domain, G-beta repeat protein | HC | chr2:3880000-3884918 | 20130731
Soybean Glyma13g31140.1 523 72.1 84.2  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v2017550.2 length: 693 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 4.6e-05 416-442
454-484
492-528
574-608
658-693
HMMSmart SM00320 WD40 0.00042 403-442
445-484
488-528
531-567
570-608
612-651
654-693
ProfileScan PS50082 WD_REPEATS_2 13.616 410-451
452-487
495-537
661-693
IPR006594 LisH dimerisation motif
Molecular Function GO:0005515 protein binding    
ProfileScan PS50896 LISH 7.748 13-45
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 3.6e-59 391-693
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 38.546 410-693
superfamily SSF50978 WD40 2.7e-56 400-693
IPR019775 WD40 repeat, conserved site
PatternScan PS00678 WD_REPEATS_1 NA 515-529
no_ID  
HMMPanther PTHR22847 WD40 4.6e-60 289-693
HMMPanther PTHR22847:SF131PUTATIVE UNCHARACTERIZED 4.6e-60 289-693
Seg seg seg NA 321-333
Wolf-PSORT
Lj6g3v2017550.2	nucl 14
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v2017550.2