Miyakogusa Predicted Gene
- Lj6g3v2017410.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr6
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SAZ8_LOTJA |
200 |
87.6 |
87.6 |
(tr|I3SAZ8) Uncharacterized protein OS=Lotus japonicus PE=4 SV=1 |
| TAIR_pep |
AT1G28330.1 |
133 |
58.2 |
71.3 |
| Symbols: DRM1, DYL1 | dormancy-associated protein-like 1 | chr1:9934252-9935216 REVERSE LENGTH=122 |
| Medicago |
Medtr2g014240.1 |
152 |
67.9 |
75.0 |
| auxin-repressed/dormancy-associated protein | HC | chr2:3988602-3986182 | 20130731 |
| Soybean |
Glyma13g31060.1 |
170 |
75.2 |
77.8 |
|
| LJGI |
gnl|LJGI|TC78768 |
684 |
100.0 |
100.0 |
homologue to UniRef100_Q9FNV7 Cluster: Auxin-repressed protein; n=1; Robinia pseudoacacia|Rep: Auxin-repressed protein - Robinia pseudoacacia (Black locust), partial (95%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj6g3v2017410.1 |
length: 113 aa. |
| IPR008406 |
Dormancyauxin associated |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF05564 |
Auxin_repressed |
1.7e-42 |
7-113 |
| no_ID |
|
| Seg |
seg |
seg |
NA |
47-60 |
- Wolf-PSORT
Lj6g3v2017410.1 nucl 8, chlo 2, extr 2, cyto 1, plas 1, chlo_mito 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj6g3v2017410.1 |
|