Miyakogusa Predicted Gene

Lj6g3v2007290.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7ISE1_MEDTR 383 70.0 81.1 (tr|G7ISE1) Zinc finger CCCH domain-containing protein OS=Medicago truncatula GN=MTR_2g014260 PE=4 SV=1
TAIR_pep AT2G33835.1 124 33.5 49.5 | Symbols: FES1 | Zinc finger C-x8-C-x5-C-x3-H type family protein | chr2:14312145-14314566 REVERSE LENGTH=587
Medicago Medtr2g014260.1 383 70.0 81.1 | zinc finger C-x8-C-x5-C-x3-H type protein | HC | chr2:4005657-3999321 | 20130731
Soybean Glyma13g31050.2 369 71.1 83.7  
LJGI gnl|LJGI|TC79304 293 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v2007290.1 length: 859 aa.
IPR000571 Zinc finger, CCCH-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF00642 zf-CCCH 1.9e-05 461-481
ProfileScan PS50103 ZF_C3H1 14.023 457-484
IPR002068 Alpha crystallin/Hsp20 domain
ProfileScan PS01031 HSP20 8.935 115-228
no_ID  
Coil coil coiled-coil NA 10-186
Seg seg seg NA 15-47
54-183
556-569
575-594
Wolf-PSORT
Lj6g3v2007290.1	nucl 12, cyto 1, plas 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v2007290.1