Miyakogusa Predicted Gene

Lj6g3v2006830.2

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr6

Full length sequence(26885540 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL K7M1G7_SOYBN 1774 89.7 94.6 (tr|K7M1G7) Phosphorylase OS=Glycine max PE=3 SV=1

TAIR_pep AT3G46970.1 810 48.4 68.2 | Symbols: ATPHS2, PHS2 | alpha-glucan phosphorylase 2 | chr3:17301625-17306111 REVERSE LENGTH=841

Medicago Medtr2g014460.1 1762 85.5 90.9 | glycogen/starch/alpha-glucan phosphorylase family protein | HC | chr2:4137162-4122601 | 20130731

Soybean Glyma13g30920.1 1401 85.6 90.1

LJGI gnl|LJGI|DC593497 1148 99.3 99.3 homologue to UniRef100_A2Q502 Cluster: Amino acid-binding ACT; n=1; Medicago truncatula|Rep: Amino acid-binding ACT - Medicago truncatula (Barrel medic), partial (58%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj6g3v2006830.2 length: 996 aa.

IPR000811 Glycosyl transferase, family 35

method AccNumber shortName E-value location

Biological Process GO:0005975 carbohydrate metabolic process

Molecular Function GO:0008184 glycogen phosphorylase activity

HMMPIR PIRSF000460 Glucan 2e-250 179-995

HMMPanther PTHR11468 GLYCOGEN 0 177-996

HMMPfam PF00343 Phosphorylase 1.8e-297 278-991

PatternScan PS00102 PHOSPHORYLASE NA 839-851

IPR011833 Glycogen/starch/alpha-glucan phosphorylase

Molecular Function GO:0004645 phosphorylase activity

Biological Process GO:0005975 carbohydrate metabolic process

Molecular Function GO:0030170 pyridoxal phosphate binding

HMMTigr TIGR02093 P_ylase: 0 193-989

no_ID

Coil coil coiled-coil NA 35-56

Gene3D G3DSA:3.30.70.260 no description 0.00029 77-137

Gene3D G3DSA:3.40.50.2000 no description 3e-116 189-660
661-974

HMMPanther PTHR11468:SF0 SUBFAMILY 0 177-996

Seg seg seg NA 22-36
37-51

superfamily SSF53756 UDP-Glycosyltransferase/glycogen 1.4e-289 179-995

superfamily SSF55021 ACT-like 6e-07 67-156

Wolf-PSORT

Lj6g3v2006830.2 chlo 11, cyto 1, mito 1, extr 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj6g3v2006830.2

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	K7M1G7_SOYBN	1774	89.7	94.6	(tr\|K7M1G7) Phosphorylase OS=Glycine max PE=3 SV=1
TAIR_pep	AT3G46970.1	810	48.4	68.2	\| Symbols: ATPHS2, PHS2 \| alpha-glucan phosphorylase 2 \| chr3:17301625-17306111 REVERSE LENGTH=841
Medicago	Medtr2g014460.1	1762	85.5	90.9	\| glycogen/starch/alpha-glucan phosphorylase family protein \| HC \| chr2:4137162-4122601 \| 20130731
Soybean	Glyma13g30920.1	1401	85.6	90.1
LJGI	gnl\|LJGI\|DC593497	1148	99.3	99.3	homologue to UniRef100_A2Q502 Cluster: Amino acid-binding ACT; n=1; Medicago truncatula\|Rep: Amino acid-binding ACT - Medicago truncatula (Barrel medic), partial (58%)

IPR000811	Glycosyl transferase, family 35
Lj6g3v2006830.2				length: 996 aa.
method	AccNumber	shortName	E-value	location
Biological Process	GO:0005975	carbohydrate metabolic process
Molecular Function	GO:0008184	glycogen phosphorylase activity
HMMPIR	PIRSF000460	Glucan	2e-250	179-995
HMMPanther	PTHR11468	GLYCOGEN	0	177-996
HMMPfam	PF00343	Phosphorylase	1.8e-297	278-991
PatternScan	PS00102	PHOSPHORYLASE	NA	839-851
IPR011833	Glycogen/starch/alpha-glucan phosphorylase
Molecular Function	GO:0004645	phosphorylase activity
Biological Process	GO:0005975	carbohydrate metabolic process
Molecular Function	GO:0030170	pyridoxal phosphate binding
HMMTigr	TIGR02093	P_ylase:	0	193-989
no_ID
Coil	coil	coiled-coil	NA	35-56
Gene3D	G3DSA:3.30.70.260	no description	0.00029	77-137
Gene3D	G3DSA:3.40.50.2000	no description	3e-116	189-660 661-974
HMMPanther	PTHR11468:SF0	SUBFAMILY	0	177-996
Seg	seg	seg	NA	22-36 37-51
superfamily	SSF53756	UDP-Glycosyltransferase/glycogen	1.4e-289	179-995
superfamily	SSF55021	ACT-like	6e-07	67-156