Miyakogusa Predicted Gene

Lj6g3v2006710.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr6

Full length sequence(26885540 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1M1Z6_SOYBN 503 72.6 81.2 (tr|I1M1Z6) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT2G20560.1 418 62.4 75.7 | Symbols: | DNAJ heat shock family protein | chr2:8848353-8849815 REVERSE LENGTH=337

Medicago Medtr2g014480.1 496 72.9 82.1 | DnaJ heat shock family protein | HC | chr2:4145457-4147946 | 20130731

Soybean Glyma13g30870.1 503 72.6 81.2

LJGI gnl|LJGI|TC63859 1992 100.0 100.0 similar to UniRef100_A2Q503 Cluster: Heat shock protein DnaJ; n=1; Medicago truncatula|Rep: Heat shock protein DnaJ - Medicago truncatula (Barrel medic), partial (92%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj6g3v2006710.1 length: 334 aa.

IPR001623 DnaJ domain

method AccNumber shortName E-value location

FPrintScan PR00625 JDOMAIN 7.6e-28 6-24
24-39
42-62
62-81

Gene3D G3DSA:1.10.287.110 no description 3.3e-32 3-92

HMMPfam PF00226 DnaJ 6.2e-28 4-67

HMMSmart SM00271 DnaJ 2.3e-30 3-62

ProfileScan PS50076 DNAJ_2 24.252 4-70

superfamily SSF46565 Chaperone 1.7e-31 1-78

IPR002939 Chaperone DnaJ, C-terminal

Biological Process GO:0006457 protein folding

Molecular Function GO:0051082 unfolded protein binding

HMMPfam PF01556 DnaJ_C 9.6e-19 257-331

IPR008971 HSP40/DnaJ peptide-binding

Biological Process GO:0006457 protein folding

Molecular Function GO:0051082 unfolded protein binding

superfamily SSF49493 HSP40/DnaJ 9.6e-18 250-330
167-249

IPR018253 DnaJ domain, conserved site

PatternScan PS00636 DNAJ_1 NA 47-66

no_ID

Gene3D G3DSA:2.60.260.20 no description 1.6e-22 167-247
248-330

HMMPanther PTHR24077 FAMILY 8.3e-101 1-330

HMMPanther PTHR24077:SF0 SUBFAMILY 8.3e-101 1-330

Seg seg seg NA 120-136

Wolf-PSORT

Lj6g3v2006710.1 cyto 12, chlo 1, nucl 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj6g3v2006710.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1M1Z6_SOYBN	503	72.6	81.2	(tr\|I1M1Z6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT2G20560.1	418	62.4	75.7	\| Symbols: \| DNAJ heat shock family protein \| chr2:8848353-8849815 REVERSE LENGTH=337
Medicago	Medtr2g014480.1	496	72.9	82.1	\| DnaJ heat shock family protein \| HC \| chr2:4145457-4147946 \| 20130731
Soybean	Glyma13g30870.1	503	72.6	81.2
LJGI	gnl\|LJGI\|TC63859	1992	100.0	100.0	similar to UniRef100_A2Q503 Cluster: Heat shock protein DnaJ; n=1; Medicago truncatula\|Rep: Heat shock protein DnaJ - Medicago truncatula (Barrel medic), partial (92%)

IPR001623	DnaJ domain
Lj6g3v2006710.1				length: 334 aa.
method	AccNumber	shortName	E-value	location
FPrintScan	PR00625	JDOMAIN	7.6e-28	6-24 24-39 42-62 62-81
Gene3D	G3DSA:1.10.287.110	no description	3.3e-32	3-92
HMMPfam	PF00226	DnaJ	6.2e-28	4-67
HMMSmart	SM00271	DnaJ	2.3e-30	3-62
ProfileScan	PS50076	DNAJ_2	24.252	4-70
superfamily	SSF46565	Chaperone	1.7e-31	1-78
IPR002939	Chaperone DnaJ, C-terminal
Biological Process	GO:0006457	protein folding
Molecular Function	GO:0051082	unfolded protein binding
HMMPfam	PF01556	DnaJ_C	9.6e-19	257-331
IPR008971	HSP40/DnaJ peptide-binding
Biological Process	GO:0006457	protein folding
Molecular Function	GO:0051082	unfolded protein binding
superfamily	SSF49493	HSP40/DnaJ	9.6e-18	250-330 167-249
IPR018253	DnaJ domain, conserved site
PatternScan	PS00636	DNAJ_1	NA	47-66
no_ID
Gene3D	G3DSA:2.60.260.20	no description	1.6e-22	167-247 248-330
HMMPanther	PTHR24077	FAMILY	8.3e-101	1-330
HMMPanther	PTHR24077:SF0	SUBFAMILY	8.3e-101	1-330
Seg	seg	seg	NA	120-136