Miyakogusa Predicted Gene

Lj6g3v2006660.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7M1G6_SOYBN 836 81.6 90.8 (tr|K7M1G6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G46100.1 638 63.0 81.7 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr5:18694316-18695734 REVERSE LENGTH=472
Medicago Medtr1g035250.1 232 29.5 53.1 | PPR containing plant-like protein | HC | chr1:12584008-12586490 | 20130731
Soybean Glyma13g30850.2 781 81.6 90.6  
LJGI gnl|LJGI|TC71404 1473 99.0 99.0 similar to UniRef100_A2Q513 Cluster: Pentatricopeptide repeat; n=1; Medicago truncatula|Rep: Pentatricopeptide repeat - Medicago truncatula (Barrel medic), partial (53%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v2006660.1 length: 479 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0054 52-81
122-151
HMMPfam PF13041 PPR_2 1.9e-07 153-203
224-273
294-342
375-420
HMMTigr TIGR00756 PPR: 1.2e-10 52-84
122-154
156-191
192-226
227-261
262-295
297-331
334-365
410-442
ProfileScan PS51375 PPR 6.160 49-83
119-153
84-118
154-189
190-224
225-259
260-294
295-329
330-364
372-406
407-441
442-477
no_ID  
HMMPanther PTHR24015 FAMILY 1.7e-126 3-466
HMMPanther PTHR24015:SF0 SUBFAMILY 1.7e-126 3-466
Seg seg seg NA 461-471
Wolf-PSORT
Lj6g3v2006660.1	mito 7, chlo_mito 6.33333, chlo 4.5, cyto_mito 4.33333
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v2006660.1 Not targeted -51.009 -1.269 -14.148 76.23% -35.591