Miyakogusa Predicted Gene

Lj6g3v2006460.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr6
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL D3GBU7_LOTJA 803 89.2 89.4 (tr|D3GBU7) Auxin response factor 3b OS=Lotus japonicus GN=ARF3b PE=2 SV=1
TAIR_pep AT2G33860.1 550 60.8 72.0 | Symbols: ETT, ARF3 | Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related | chr2:14325444-14328613 REVERSE LENGTH=608
Medicago Medtr2g014770.2 838 70.6 75.5 | auxin response factor 3 | HC | chr2:4274889-4270421 | 20130731
Soybean Glyma15g08540.1 877 65.8 71.3  
LJGI gnl|LJGI|TC61200 1522 100.0 100.0 similar to UniRef100_A2Q532 Cluster: Transcriptional factor B3; Auxin response factor; n=1; Medicago truncatula|Rep: Transcriptional factor B3; Auxin response factor - Medicago truncatula (Barrel medic), partial (37%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj6g3v2006460.2 length: 649 aa.
IPR003340 B3 DNA binding domain
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02362 B3 3.3e-23 154-255
HMMSmart SM01019 B3 2e-23 154-256
ProfileScan PS50863 B3 13.437 154-256
IPR010525 Auxin response factor
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Biological Process GO:0009725 response to hormone stimulus    
HMMPfam PF06507 Auxin_resp 5.9e-35 280-361
IPR015300 DNA-binding pseudobarrel domain
Gene3D G3DSA:2.40.330.10 no description 2.3e-39 148-257
superfamily SSF101936 DNA-binding 6.4e-46 137-294
no_ID  
HMMPanther PTHR31384 FAMILY 7.3e-186 22-389
Seg seg seg NA 16-46
130-144
451-462
485-497
Wolf-PSORT
Lj6g3v2006460.2	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj6g3v2006460.2